Desulfosporosinus sp. OL

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Eubacteriales; Peptococcaceae; Desulfosporosinus

Average proteome isoelectric point is 6.5

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5425 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Q8QVW0|A0A1Q8QVW0_9FIRM Nucleotide-binding protein OS=Desulfosporosinus sp. OL OX=1888891 GN=DSOL_2611 PE=4 SV=1
MM1 pKa = 8.44DD2 pKa = 3.86YY3 pKa = 9.99PYY5 pKa = 10.81LIGYY9 pKa = 7.99VYY11 pKa = 10.54SEE13 pKa = 4.48EE14 pKa = 4.14GRR16 pKa = 11.84SEE18 pKa = 4.67HH19 pKa = 6.3FLKK22 pKa = 8.3TTPTNIASFIIKK34 pKa = 10.21NSPLDD39 pKa = 3.78VIQITTPLDD48 pKa = 3.26TAFISTRR55 pKa = 11.84AGFIDD60 pKa = 3.8YY61 pKa = 10.83CADD64 pKa = 3.4QEE66 pKa = 4.28FLRR69 pKa = 11.84NEE71 pKa = 4.32LLPVLIPMQMGDD83 pKa = 3.74TEE85 pKa = 4.22PSEE88 pKa = 4.35VEE90 pKa = 3.81LVPEE94 pKa = 4.03NEE96 pKa = 4.21MNSMDD101 pKa = 4.65EE102 pKa = 4.3EE103 pKa = 4.96GLDD106 pKa = 3.52SLEE109 pKa = 4.13FF110 pKa = 4.75

Molecular weight: 12.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Q8QM20|A0A1Q8QM20_9FIRM MacB_PCD domain-containing protein OS=Desulfosporosinus sp. OL OX=1888891 GN=DSOL_4043 PE=4 SV=1
MM1 pKa = 7.19RR2 pKa = 11.84QRR4 pKa = 11.84VRR6 pKa = 11.84MGIMGTAKK14 pKa = 10.29GPHH17 pKa = 5.49IQALATALQNRR28 pKa = 11.84GAEE31 pKa = 4.14VSFVSPQRR39 pKa = 11.84LTSFIPEE46 pKa = 4.08PATIITGAGGSRR58 pKa = 11.84EE59 pKa = 3.96NLRR62 pKa = 11.84DD63 pKa = 3.48LDD65 pKa = 4.05ALLVRR70 pKa = 11.84SLPGGSLEE78 pKa = 4.01QVIYY82 pKa = 10.48RR83 pKa = 11.84VDD85 pKa = 3.25VLHH88 pKa = 6.95RR89 pKa = 11.84LEE91 pKa = 4.36KK92 pKa = 10.88LGLKK96 pKa = 9.62VINRR100 pKa = 11.84AAVLEE105 pKa = 4.3KK106 pKa = 10.71NSRR109 pKa = 11.84QVLYY113 pKa = 9.27VCFVGRR119 pKa = 11.84CGLASTQNGRR129 pKa = 11.84DD130 pKa = 3.16RR131 pKa = 11.84KK132 pKa = 10.18LRR134 pKa = 11.84SGDD137 pKa = 3.64GSCEE141 pKa = 3.72EE142 pKa = 5.11DD143 pKa = 3.4GGSGCEE149 pKa = 3.77TSFWLPRR156 pKa = 11.84NRR158 pKa = 11.84HH159 pKa = 4.13GLGRR163 pKa = 11.84GSRR166 pKa = 11.84GGLPRR171 pKa = 11.84FPSPGIGPVCVLFTRR186 pKa = 11.84ISTAA190 pKa = 2.91

Molecular weight: 20.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5425

0

5425

1464743

37

2863

270.0

30.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.619 ± 0.037

1.12 ± 0.014

4.915 ± 0.029

6.904 ± 0.044

4.033 ± 0.029

7.473 ± 0.035

1.923 ± 0.017

7.151 ± 0.029

6.08 ± 0.032

10.419 ± 0.037

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.719 ± 0.019

4.035 ± 0.023

3.951 ± 0.022

3.842 ± 0.025

4.838 ± 0.03

6.025 ± 0.027

5.402 ± 0.033

7.288 ± 0.034

1.086 ± 0.013

3.178 ± 0.024
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski