Amino acid dipepetide frequency for Beihai zhaovirus-like virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.717AlaAla: 4.717 ± 0.0
1.179AlaCys: 1.179 ± 0.0
2.948AlaAsp: 2.948 ± 0.0
1.179AlaGlu: 1.179 ± 0.0
4.127AlaPhe: 4.127 ± 0.0
3.538AlaGly: 3.538 ± 0.0
1.179AlaHis: 1.179 ± 0.0
5.307AlaIle: 5.307 ± 0.0
3.538AlaLys: 3.538 ± 0.0
3.538AlaLeu: 3.538 ± 0.0
4.127AlaMet: 4.127 ± 0.0
1.769AlaAsn: 1.769 ± 0.0
2.948AlaPro: 2.948 ± 0.0
5.307AlaGln: 5.307 ± 0.0
4.127AlaArg: 4.127 ± 0.0
4.717AlaSer: 4.717 ± 0.0
2.358AlaThr: 2.358 ± 0.0
2.948AlaVal: 2.948 ± 0.0
0.0AlaTrp: 0.0 ± 0.0
5.307AlaTyr: 5.307 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.59CysCys: 0.59 ± 0.0
0.59CysAsp: 0.59 ± 0.0
0.0CysGlu: 0.0 ± 0.0
1.179CysPhe: 1.179 ± 0.0
1.179CysGly: 1.179 ± 0.0
0.59CysHis: 0.59 ± 0.0
1.179CysIle: 1.179 ± 0.0
0.59CysLys: 0.59 ± 0.0
1.179CysLeu: 1.179 ± 0.0
0.59CysMet: 0.59 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.59CysPro: 0.59 ± 0.0
0.59CysGln: 0.59 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.769CysSer: 1.769 ± 0.0
0.59CysThr: 0.59 ± 0.0
1.179CysVal: 1.179 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.179CysTyr: 1.179 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
0.59AspAla: 0.59 ± 0.0
1.179AspCys: 1.179 ± 0.0
2.358AspAsp: 2.358 ± 0.0
4.717AspGlu: 4.717 ± 0.0
2.948AspPhe: 2.948 ± 0.0
4.717AspGly: 4.717 ± 0.0
1.769AspHis: 1.769 ± 0.0
2.358AspIle: 2.358 ± 0.0
2.358AspLys: 2.358 ± 0.0
1.179AspLeu: 1.179 ± 0.0
1.769AspMet: 1.769 ± 0.0
2.358AspAsn: 2.358 ± 0.0
2.948AspPro: 2.948 ± 0.0
3.538AspGln: 3.538 ± 0.0
2.948AspArg: 2.948 ± 0.0
4.127AspSer: 4.127 ± 0.0
4.127AspThr: 4.127 ± 0.0
2.948AspVal: 2.948 ± 0.0
0.0AspTrp: 0.0 ± 0.0
3.538AspTyr: 3.538 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.127GluAla: 4.127 ± 0.0
0.59GluCys: 0.59 ± 0.0
3.538GluAsp: 3.538 ± 0.0
2.948GluGlu: 2.948 ± 0.0
0.59GluPhe: 0.59 ± 0.0
1.769GluGly: 1.769 ± 0.0
0.0GluHis: 0.0 ± 0.0
1.179GluIle: 1.179 ± 0.0
2.948GluLys: 2.948 ± 0.0
4.717GluLeu: 4.717 ± 0.0
3.538GluMet: 3.538 ± 0.0
1.769GluAsn: 1.769 ± 0.0
1.179GluPro: 1.179 ± 0.0
2.358GluGln: 2.358 ± 0.0
3.538GluArg: 3.538 ± 0.0
3.538GluSer: 3.538 ± 0.0
4.127GluThr: 4.127 ± 0.0
4.717GluVal: 4.717 ± 0.0
0.59GluTrp: 0.59 ± 0.0
2.948GluTyr: 2.948 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.948PheAla: 2.948 ± 0.0
0.59PheCys: 0.59 ± 0.0
2.358PheAsp: 2.358 ± 0.0
4.127PheGlu: 4.127 ± 0.0
1.179PhePhe: 1.179 ± 0.0
2.358PheGly: 2.358 ± 0.0
1.179PheHis: 1.179 ± 0.0
1.769PheIle: 1.769 ± 0.0
4.127PheLys: 4.127 ± 0.0
1.179PheLeu: 1.179 ± 0.0
0.59PheMet: 0.59 ± 0.0
2.358PheAsn: 2.358 ± 0.0
1.179PhePro: 1.179 ± 0.0
4.717PheGln: 4.717 ± 0.0
1.769PheArg: 1.769 ± 0.0
2.358PheSer: 2.358 ± 0.0
1.769PheThr: 1.769 ± 0.0
2.358PheVal: 2.358 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.179PheTyr: 1.179 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.948GlyAla: 2.948 ± 0.0
1.769GlyCys: 1.769 ± 0.0
3.538GlyAsp: 3.538 ± 0.0
3.538GlyGlu: 3.538 ± 0.0
2.358GlyPhe: 2.358 ± 0.0
2.948GlyGly: 2.948 ± 0.0
2.358GlyHis: 2.358 ± 0.0
4.717GlyIle: 4.717 ± 0.0
5.307GlyLys: 5.307 ± 0.0
4.717GlyLeu: 4.717 ± 0.0
0.0GlyMet: 0.0 ± 0.0
3.538GlyAsn: 3.538 ± 0.0
0.0GlyPro: 0.0 ± 0.0
1.769GlyGln: 1.769 ± 0.0
1.769GlyArg: 1.769 ± 0.0
2.948GlySer: 2.948 ± 0.0
2.948GlyThr: 2.948 ± 0.0
6.486GlyVal: 6.486 ± 0.0
1.179GlyTrp: 1.179 ± 0.0
1.769GlyTyr: 1.769 ± 0.0
0.59GlyXaa: 0.59 ± 0.0
His
2.358HisAla: 2.358 ± 0.0
0.59HisCys: 0.59 ± 0.0
1.769HisAsp: 1.769 ± 0.0
0.0HisGlu: 0.0 ± 0.0
0.59HisPhe: 0.59 ± 0.0
1.179HisGly: 1.179 ± 0.0
0.59HisHis: 0.59 ± 0.0
1.769HisIle: 1.769 ± 0.0
1.179HisLys: 1.179 ± 0.0
1.179HisLeu: 1.179 ± 0.0
0.59HisMet: 0.59 ± 0.0
2.948HisAsn: 2.948 ± 0.0
1.769HisPro: 1.769 ± 0.0
0.59HisGln: 0.59 ± 0.0
1.769HisArg: 1.769 ± 0.0
1.179HisSer: 1.179 ± 0.0
1.179HisThr: 1.179 ± 0.0
2.358HisVal: 2.358 ± 0.0
0.59HisTrp: 0.59 ± 0.0
1.179HisTyr: 1.179 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
5.896IleAla: 5.896 ± 0.0
1.179IleCys: 1.179 ± 0.0
2.358IleAsp: 2.358 ± 0.0
2.948IleGlu: 2.948 ± 0.0
2.358IlePhe: 2.358 ± 0.0
2.358IleGly: 2.358 ± 0.0
1.179IleHis: 1.179 ± 0.0
2.948IleIle: 2.948 ± 0.0
5.896IleLys: 5.896 ± 0.0
3.538IleLeu: 3.538 ± 0.0
1.179IleMet: 1.179 ± 0.0
3.538IleAsn: 3.538 ± 0.0
3.538IlePro: 3.538 ± 0.0
2.948IleGln: 2.948 ± 0.0
4.127IleArg: 4.127 ± 0.0
1.179IleSer: 1.179 ± 0.0
3.538IleThr: 3.538 ± 0.0
8.844IleVal: 8.844 ± 0.0
0.0IleTrp: 0.0 ± 0.0
2.358IleTyr: 2.358 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
6.486LysAla: 6.486 ± 0.0
0.0LysCys: 0.0 ± 0.0
3.538LysAsp: 3.538 ± 0.0
3.538LysGlu: 3.538 ± 0.0
3.538LysPhe: 3.538 ± 0.0
4.717LysGly: 4.717 ± 0.0
0.59LysHis: 0.59 ± 0.0
2.358LysIle: 2.358 ± 0.0
10.613LysLys: 10.613 ± 0.0
8.844LysLeu: 8.844 ± 0.0
1.769LysMet: 1.769 ± 0.0
5.896LysAsn: 5.896 ± 0.0
3.538LysPro: 3.538 ± 0.0
5.307LysGln: 5.307 ± 0.0
2.948LysArg: 2.948 ± 0.0
4.717LysSer: 4.717 ± 0.0
3.538LysThr: 3.538 ± 0.0
4.127LysVal: 4.127 ± 0.0
0.0LysTrp: 0.0 ± 0.0
3.538LysTyr: 3.538 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
5.307LeuAla: 5.307 ± 0.0
1.769LeuCys: 1.769 ± 0.0
1.769LeuAsp: 1.769 ± 0.0
3.538LeuGlu: 3.538 ± 0.0
2.948LeuPhe: 2.948 ± 0.0
2.358LeuGly: 2.358 ± 0.0
1.179LeuHis: 1.179 ± 0.0
3.538LeuIle: 3.538 ± 0.0
5.307LeuLys: 5.307 ± 0.0
3.538LeuLeu: 3.538 ± 0.0
2.948LeuMet: 2.948 ± 0.0
5.307LeuAsn: 5.307 ± 0.0
3.538LeuPro: 3.538 ± 0.0
4.127LeuGln: 4.127 ± 0.0
4.127LeuArg: 4.127 ± 0.0
3.538LeuSer: 3.538 ± 0.0
1.179LeuThr: 1.179 ± 0.0
5.896LeuVal: 5.896 ± 0.0
1.769LeuTrp: 1.769 ± 0.0
2.358LeuTyr: 2.358 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.59MetAla: 0.59 ± 0.0
0.0MetCys: 0.0 ± 0.0
0.59MetAsp: 0.59 ± 0.0
2.358MetGlu: 2.358 ± 0.0
0.0MetPhe: 0.0 ± 0.0
1.769MetGly: 1.769 ± 0.0
0.59MetHis: 0.59 ± 0.0
2.948MetIle: 2.948 ± 0.0
2.358MetLys: 2.358 ± 0.0
1.179MetLeu: 1.179 ± 0.0
1.179MetMet: 1.179 ± 0.0
0.59MetAsn: 0.59 ± 0.0
2.358MetPro: 2.358 ± 0.0
1.179MetGln: 1.179 ± 0.0
1.179MetArg: 1.179 ± 0.0
1.179MetSer: 1.179 ± 0.0
1.769MetThr: 1.769 ± 0.0
3.538MetVal: 3.538 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.59MetTyr: 0.59 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.948AsnAla: 2.948 ± 0.0
0.59AsnCys: 0.59 ± 0.0
3.538AsnAsp: 3.538 ± 0.0
4.717AsnGlu: 4.717 ± 0.0
2.358AsnPhe: 2.358 ± 0.0
4.717AsnGly: 4.717 ± 0.0
3.538AsnHis: 3.538 ± 0.0
5.896AsnIle: 5.896 ± 0.0
2.358AsnLys: 2.358 ± 0.0
2.358AsnLeu: 2.358 ± 0.0
0.59AsnMet: 0.59 ± 0.0
1.179AsnAsn: 1.179 ± 0.0
0.59AsnPro: 0.59 ± 0.0
1.769AsnGln: 1.769 ± 0.0
1.179AsnArg: 1.179 ± 0.0
2.948AsnSer: 2.948 ± 0.0
2.948AsnThr: 2.948 ± 0.0
2.948AsnVal: 2.948 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
4.717AsnTyr: 4.717 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.358ProAla: 2.358 ± 0.0
0.0ProCys: 0.0 ± 0.0
1.179ProAsp: 1.179 ± 0.0
4.127ProGlu: 4.127 ± 0.0
1.179ProPhe: 1.179 ± 0.0
2.358ProGly: 2.358 ± 0.0
0.59ProHis: 0.59 ± 0.0
2.948ProIle: 2.948 ± 0.0
2.358ProLys: 2.358 ± 0.0
2.358ProLeu: 2.358 ± 0.0
1.179ProMet: 1.179 ± 0.0
2.358ProAsn: 2.358 ± 0.0
0.0ProPro: 0.0 ± 0.0
2.358ProGln: 2.358 ± 0.0
1.179ProArg: 1.179 ± 0.0
2.358ProSer: 2.358 ± 0.0
3.538ProThr: 3.538 ± 0.0
2.948ProVal: 2.948 ± 0.0
0.59ProTrp: 0.59 ± 0.0
1.769ProTyr: 1.769 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
4.127GlnAla: 4.127 ± 0.0
0.0GlnCys: 0.0 ± 0.0
3.538GlnAsp: 3.538 ± 0.0
1.769GlnGlu: 1.769 ± 0.0
2.358GlnPhe: 2.358 ± 0.0
2.358GlnGly: 2.358 ± 0.0
3.538GlnHis: 3.538 ± 0.0
3.538GlnIle: 3.538 ± 0.0
7.075GlnLys: 7.075 ± 0.0
5.307GlnLeu: 5.307 ± 0.0
0.59GlnMet: 0.59 ± 0.0
2.358GlnAsn: 2.358 ± 0.0
0.0GlnPro: 0.0 ± 0.0
4.717GlnGln: 4.717 ± 0.0
4.717GlnArg: 4.717 ± 0.0
2.358GlnSer: 2.358 ± 0.0
4.127GlnThr: 4.127 ± 0.0
5.896GlnVal: 5.896 ± 0.0
1.179GlnTrp: 1.179 ± 0.0
2.358GlnTyr: 2.358 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.717ArgAla: 4.717 ± 0.0
0.0ArgCys: 0.0 ± 0.0
1.769ArgAsp: 1.769 ± 0.0
2.948ArgGlu: 2.948 ± 0.0
1.769ArgPhe: 1.769 ± 0.0
5.307ArgGly: 5.307 ± 0.0
1.179ArgHis: 1.179 ± 0.0
2.948ArgIle: 2.948 ± 0.0
2.358ArgLys: 2.358 ± 0.0
1.769ArgLeu: 1.769 ± 0.0
0.59ArgMet: 0.59 ± 0.0
3.538ArgAsn: 3.538 ± 0.0
1.769ArgPro: 1.769 ± 0.0
2.948ArgGln: 2.948 ± 0.0
1.179ArgArg: 1.179 ± 0.0
3.538ArgSer: 3.538 ± 0.0
4.127ArgThr: 4.127 ± 0.0
3.538ArgVal: 3.538 ± 0.0
0.59ArgTrp: 0.59 ± 0.0
2.358ArgTyr: 2.358 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.538SerAla: 3.538 ± 0.0
1.179SerCys: 1.179 ± 0.0
2.358SerAsp: 2.358 ± 0.0
1.179SerGlu: 1.179 ± 0.0
4.127SerPhe: 4.127 ± 0.0
5.307SerGly: 5.307 ± 0.0
0.0SerHis: 0.0 ± 0.0
5.307SerIle: 5.307 ± 0.0
7.075SerLys: 7.075 ± 0.0
5.896SerLeu: 5.896 ± 0.0
1.179SerMet: 1.179 ± 0.0
3.538SerAsn: 3.538 ± 0.0
0.0SerPro: 0.0 ± 0.0
2.358SerGln: 2.358 ± 0.0
1.769SerArg: 1.769 ± 0.0
5.896SerSer: 5.896 ± 0.0
2.358SerThr: 2.358 ± 0.0
4.127SerVal: 4.127 ± 0.0
1.179SerTrp: 1.179 ± 0.0
5.307SerTyr: 5.307 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
2.948ThrAla: 2.948 ± 0.0
1.179ThrCys: 1.179 ± 0.0
2.948ThrAsp: 2.948 ± 0.0
1.179ThrGlu: 1.179 ± 0.0
2.358ThrPhe: 2.358 ± 0.0
2.948ThrGly: 2.948 ± 0.0
2.358ThrHis: 2.358 ± 0.0
2.358ThrIle: 2.358 ± 0.0
5.307ThrLys: 5.307 ± 0.0
5.896ThrLeu: 5.896 ± 0.0
0.0ThrMet: 0.0 ± 0.0
1.769ThrAsn: 1.769 ± 0.0
3.538ThrPro: 3.538 ± 0.0
5.896ThrGln: 5.896 ± 0.0
3.538ThrArg: 3.538 ± 0.0
3.538ThrSer: 3.538 ± 0.0
2.358ThrThr: 2.358 ± 0.0
4.717ThrVal: 4.717 ± 0.0
0.59ThrTrp: 0.59 ± 0.0
1.179ThrTyr: 1.179 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.538ValAla: 3.538 ± 0.0
0.59ValCys: 0.59 ± 0.0
5.896ValAsp: 5.896 ± 0.0
2.948ValGlu: 2.948 ± 0.0
2.948ValPhe: 2.948 ± 0.0
2.948ValGly: 2.948 ± 0.0
0.59ValHis: 0.59 ± 0.0
4.127ValIle: 4.127 ± 0.0
6.486ValLys: 6.486 ± 0.0
4.717ValLeu: 4.717 ± 0.0
1.769ValMet: 1.769 ± 0.0
4.717ValAsn: 4.717 ± 0.0
2.948ValPro: 2.948 ± 0.0
3.538ValGln: 3.538 ± 0.0
3.538ValArg: 3.538 ± 0.0
7.075ValSer: 7.075 ± 0.0
4.717ValThr: 4.717 ± 0.0
5.896ValVal: 5.896 ± 0.0
2.358ValTrp: 2.358 ± 0.0
5.896ValTyr: 5.896 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.59TrpAla: 0.59 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.179TrpAsp: 1.179 ± 0.0
1.179TrpGlu: 1.179 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.59TrpGly: 0.59 ± 0.0
0.59TrpHis: 0.59 ± 0.0
1.179TrpIle: 1.179 ± 0.0
0.59TrpLys: 0.59 ± 0.0
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.59TrpAsn: 0.59 ± 0.0
0.0TrpPro: 0.0 ± 0.0
1.179TrpGln: 1.179 ± 0.0
0.59TrpArg: 0.59 ± 0.0
0.59TrpSer: 0.59 ± 0.0
0.59TrpThr: 0.59 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.59TrpTyr: 0.59 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.127TyrAla: 4.127 ± 0.0
0.59TyrCys: 0.59 ± 0.0
4.717TyrAsp: 4.717 ± 0.0
1.769TyrGlu: 1.769 ± 0.0
1.179TyrPhe: 1.179 ± 0.0
1.769TyrGly: 1.769 ± 0.0
1.769TyrHis: 1.769 ± 0.0
3.538TyrIle: 3.538 ± 0.0
1.769TyrLys: 1.769 ± 0.0
2.948TyrLeu: 2.948 ± 0.0
1.179TyrMet: 1.179 ± 0.0
1.769TyrAsn: 1.769 ± 0.0
5.307TyrPro: 5.307 ± 0.0
4.717TyrGln: 4.717 ± 0.0
2.948TyrArg: 2.948 ± 0.0
4.127TyrSer: 4.127 ± 0.0
4.717TyrThr: 4.717 ± 0.0
1.769TyrVal: 1.769 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
2.948TyrTyr: 2.948 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.59XaaTyr: 0.59 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (1697 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski