Thermus virus IN93

Taxonomy: Viruses; Varidnaviria; Helvetiavirae; Dividoviricota; Laserviricetes; Halopanivirales; Sphaerolipoviridae; Gammasphaerolipovirus

Average proteome isoelectric point is 7.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 39 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q859S7|Q859S7_9VIRU Uncharacterized protein OS=Thermus virus IN93 OX=1714273 PE=4 SV=1
MM1 pKa = 7.36SFSTSQYY8 pKa = 10.73LDD10 pKa = 3.84DD11 pKa = 4.57GLYY14 pKa = 10.4SGSSGSSDD22 pKa = 3.15FGLSNSYY29 pKa = 8.23TLPLTGSSSSGSSDD43 pKa = 3.17FGLSNSYY50 pKa = 10.28PFLWAPTGDD59 pKa = 3.63TPLWAQILGGLGQIGSLIDD78 pKa = 3.89PYY80 pKa = 10.94ILTEE84 pKa = 3.92QEE86 pKa = 3.71RR87 pKa = 11.84LQYY90 pKa = 10.54QLQLAQAQAEE100 pKa = 4.21AAKK103 pKa = 10.19AQAASVQAQPAVPVWVWVLVGLGVVLLLVFALKK136 pKa = 10.25EE137 pKa = 3.89

Molecular weight: 14.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q859T1|Q859T1_9VIRU Uncharacterized protein OS=Thermus virus IN93 OX=1714273 PE=4 SV=1
MM1 pKa = 7.85GGRR4 pKa = 11.84QTFRR8 pKa = 11.84ILIVGKK14 pKa = 10.08SGSGKK19 pKa = 8.62STLARR24 pKa = 11.84QIVRR28 pKa = 11.84AMEE31 pKa = 3.84GRR33 pKa = 11.84FRR35 pKa = 11.84RR36 pKa = 11.84LIIVNRR42 pKa = 11.84KK43 pKa = 6.74TEE45 pKa = 4.1FGEE48 pKa = 4.0LAEE51 pKa = 3.93ARR53 pKa = 11.84YY54 pKa = 9.33RR55 pKa = 11.84VGEE58 pKa = 5.07DD59 pKa = 3.33GDD61 pKa = 3.63PWPVLKK67 pKa = 10.4RR68 pKa = 11.84HH69 pKa = 5.74RR70 pKa = 11.84RR71 pKa = 11.84VHH73 pKa = 5.07FHH75 pKa = 4.41VTGYY79 pKa = 10.74DD80 pKa = 3.33PRR82 pKa = 11.84PFLDD86 pKa = 3.99ALGQAIMRR94 pKa = 11.84LRR96 pKa = 11.84DD97 pKa = 3.53VLLLLDD103 pKa = 4.27EE104 pKa = 4.58AHH106 pKa = 6.91HH107 pKa = 6.15FFPRR111 pKa = 11.84GQVPKK116 pKa = 10.89GLFEE120 pKa = 4.2VLTGGRR126 pKa = 11.84EE127 pKa = 4.02FGHH130 pKa = 5.84SAIFVTQMLQAATGGIDD147 pKa = 3.12PGVRR151 pKa = 11.84RR152 pKa = 11.84QASHH156 pKa = 6.68LVAFRR161 pKa = 11.84LTEE164 pKa = 3.95PRR166 pKa = 11.84EE167 pKa = 4.11VQALADD173 pKa = 3.92MFPEE177 pKa = 4.23LGEE180 pKa = 3.87RR181 pKa = 11.84VRR183 pKa = 11.84ALKK186 pKa = 10.6RR187 pKa = 11.84PDD189 pKa = 4.45DD190 pKa = 4.44GLPPEE195 pKa = 4.85YY196 pKa = 10.32GVKK199 pKa = 10.71DD200 pKa = 3.86LDD202 pKa = 3.62RR203 pKa = 11.84DD204 pKa = 3.55RR205 pKa = 11.84AGLVLRR211 pKa = 11.84DD212 pKa = 3.33PRR214 pKa = 11.84APQRR218 pKa = 11.84RR219 pKa = 11.84VFMPLDD225 pKa = 3.52GG226 pKa = 4.64

Molecular weight: 25.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

39

0

39

5911

37

412

151.6

16.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.352 ± 0.579

0.829 ± 0.162

4.314 ± 0.209

6.344 ± 0.53

2.944 ± 0.293

9.406 ± 0.407

1.59 ± 0.263

3.367 ± 0.235

3.13 ± 0.342

10.387 ± 0.47

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.962 ± 0.173

2.284 ± 0.339

7.308 ± 0.404

4.179 ± 0.325

8.323 ± 0.548

4.517 ± 0.468

4.483 ± 0.48

7.884 ± 0.367

2.284 ± 0.23

3.113 ± 0.243
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski