Aspergillus coremiiformis

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina;

Average proteome isoelectric point is 6.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9078 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5N6ZBR7|A0A5N6ZBR7_9EURO Major facilitator superfamily domain-containing protein OS=Aspergillus coremiiformis OX=138285 GN=BDV28DRAFT_164074 PE=4 SV=1
MM1 pKa = 7.41KK2 pKa = 10.38FSSTSALAAALVAGVNGASIPRR24 pKa = 11.84TQGSVPITFIGAADD38 pKa = 3.6AQFTQDD44 pKa = 4.1FPTDD48 pKa = 3.52GSGTAITNPLSISHH62 pKa = 7.03ISSSTDD68 pKa = 2.88GVSCVFNGIDD78 pKa = 3.28NSVTVVSGSEE88 pKa = 4.23TVDD91 pKa = 2.98VGPPQTQTSGTCNVGSAQPEE111 pKa = 4.4SRR113 pKa = 11.84SGTGQVDD120 pKa = 3.11ITFIGAADD128 pKa = 3.57AQFTQGFPTDD138 pKa = 3.8GSSITISNPLSISHH152 pKa = 6.89IASSTEE158 pKa = 3.98GVSCTFNGVDD168 pKa = 3.42NSVTSVTGAQTVDD181 pKa = 3.17VGPPQTQVSGSCHH194 pKa = 6.5SII196 pKa = 3.28

Molecular weight: 19.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5N6Z6M9|A0A5N6Z6M9_9EURO S-adenosyl-L-methionine-dependent methyltransferase OS=Aspergillus coremiiformis OX=138285 GN=BDV28DRAFT_114710 PE=4 SV=1
MM1 pKa = 7.88PSHH4 pKa = 6.91KK5 pKa = 10.39SFRR8 pKa = 11.84TKK10 pKa = 10.45QKK12 pKa = 9.84LAKK15 pKa = 9.55AQKK18 pKa = 8.59QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TGNTIRR36 pKa = 11.84YY37 pKa = 5.79NAKK40 pKa = 8.89RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.14WRR45 pKa = 11.84KK46 pKa = 7.51TRR48 pKa = 11.84LGLL51 pKa = 4.09

Molecular weight: 6.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9078

0

9078

4351296

49

5990

479.3

53.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.061 ± 0.023

1.263 ± 0.009

5.609 ± 0.017

6.132 ± 0.023

3.788 ± 0.015

6.648 ± 0.021

2.481 ± 0.011

5.006 ± 0.017

4.668 ± 0.021

9.123 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.145 ± 0.01

3.706 ± 0.012

6.108 ± 0.026

4.09 ± 0.018

6.305 ± 0.022

8.493 ± 0.03

5.948 ± 0.015

6.167 ± 0.017

1.431 ± 0.009

2.826 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski