Capybara microvirus Cap1_SP_51

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7G7|A0A4P8W7G7_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_51 OX=2584781 PE=4 SV=1
MM1 pKa = 7.69SSFLTRR7 pKa = 11.84LLNPIKK13 pKa = 10.52LPIISIPLSFIEE25 pKa = 5.13KK26 pKa = 10.4GVDD29 pKa = 3.33LFKK32 pKa = 11.07DD33 pKa = 3.51SSSLSEE39 pKa = 3.52ITIGSKK45 pKa = 10.28SLNDD49 pKa = 3.7TTLGSYY55 pKa = 10.51LGLTPSDD62 pKa = 3.46AAEE65 pKa = 4.19SAEE68 pKa = 4.03SSSFVIDD75 pKa = 3.73GVTFSADD82 pKa = 2.81NQYY85 pKa = 10.29AQNYY89 pKa = 6.98IARR92 pKa = 11.84FGYY95 pKa = 9.93SSPRR99 pKa = 11.84VLSSQLQKK107 pKa = 11.13SLWEE111 pKa = 3.78QAVSYY116 pKa = 7.94EE117 pKa = 4.01QNKK120 pKa = 10.13IITDD124 pKa = 3.47NQRR127 pKa = 11.84EE128 pKa = 4.08YY129 pKa = 11.18DD130 pKa = 3.89SEE132 pKa = 4.4SSQVEE137 pKa = 4.09RR138 pKa = 11.84LQEE141 pKa = 3.88AGINADD147 pKa = 3.5LSGLSGVSGISQSATSPSDD166 pKa = 3.19TDD168 pKa = 4.28DD169 pKa = 3.24VSNLINAGSGVVGLASGLFSGIFGGIQSIISIRR202 pKa = 11.84KK203 pKa = 8.13QLAEE207 pKa = 4.11TEE209 pKa = 4.28ATKK212 pKa = 11.09SNTFGGVVKK221 pKa = 10.44LAQEE225 pKa = 4.33RR226 pKa = 11.84ADD228 pKa = 3.67TMSGISITEE237 pKa = 4.06DD238 pKa = 2.98QDD240 pKa = 3.69GLKK243 pKa = 10.79FNGNLYY249 pKa = 9.89PDD251 pKa = 3.42WNSFYY256 pKa = 11.01DD257 pKa = 3.51ANTDD261 pKa = 3.79LFADD265 pKa = 4.27DD266 pKa = 5.54FSYY269 pKa = 10.88LPKK272 pKa = 10.25HH273 pKa = 5.6LQSVYY278 pKa = 10.37GKK280 pKa = 10.52AFFGRR285 pKa = 11.84FRR287 pKa = 11.84SAAGRR292 pKa = 11.84AAAARR297 pKa = 11.84NQLAANKK304 pKa = 9.24GASEE308 pKa = 5.14LIMDD312 pKa = 4.94QSFDD316 pKa = 3.78PANTSDD322 pKa = 4.13LFKK325 pKa = 10.2MAHH328 pKa = 4.46EE329 pKa = 4.51TFRR332 pKa = 11.84NSSSLSWLTTQIEE345 pKa = 4.26LQIKK349 pKa = 9.83QSLANSQIDD358 pKa = 3.52YY359 pKa = 9.77GGTMMTYY366 pKa = 11.09ADD368 pKa = 5.05LYY370 pKa = 11.43AMNEE374 pKa = 4.24TSSLQYY380 pKa = 10.85DD381 pKa = 3.87ITRR384 pKa = 11.84SLADD388 pKa = 3.42EE389 pKa = 3.82QVYY392 pKa = 10.5ILEE395 pKa = 4.49KK396 pKa = 10.21EE397 pKa = 3.92LRR399 pKa = 11.84LLVEE403 pKa = 4.0QDD405 pKa = 3.01EE406 pKa = 4.8AMTSRR411 pKa = 11.84IHH413 pKa = 7.06SSLINSINNDD423 pKa = 3.1FEE425 pKa = 4.65SPYY428 pKa = 10.09IRR430 pKa = 11.84SILLSALFSNPEE442 pKa = 3.74KK443 pKa = 10.61VASDD447 pKa = 3.39VVNNVITAAIGSALVLL463 pKa = 3.91

Molecular weight: 50.3 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4W2|A0A4P8W4W2_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_51 OX=2584781 PE=4 SV=1
MM1 pKa = 7.95SILNLFNFFSKK12 pKa = 10.52FKK14 pKa = 10.32PFLKK18 pKa = 9.95KK19 pKa = 10.56VYY21 pKa = 10.4SFTPLVLSVIAIFISLSCLRR41 pKa = 11.84VSRR44 pKa = 11.84SALEE48 pKa = 4.15KK49 pKa = 10.34SSHH52 pKa = 5.58AVEE55 pKa = 4.02ICSNYY60 pKa = 10.37SSDD63 pKa = 3.06ISSLVDD69 pKa = 3.24EE70 pKa = 4.49VRR72 pKa = 11.84KK73 pKa = 7.51MTEE76 pKa = 3.89TIEE79 pKa = 4.5NRR81 pKa = 11.84LDD83 pKa = 3.57EE84 pKa = 4.33QNEE87 pKa = 4.28MLSHH91 pKa = 7.07IYY93 pKa = 10.39GDD95 pKa = 4.01YY96 pKa = 10.67FISIYY101 pKa = 11.23GNGNKK106 pKa = 9.24VDD108 pKa = 3.79GKK110 pKa = 10.68NFGKK114 pKa = 9.3TSKK117 pKa = 10.58KK118 pKa = 10.52

Molecular weight: 13.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1928

89

784

385.6

43.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.135 ± 1.102

1.297 ± 0.52

6.795 ± 0.339

4.305 ± 0.637

7.417 ± 0.911

4.824 ± 0.916

1.815 ± 0.666

5.965 ± 0.613

4.824 ± 1.016

8.766 ± 0.624

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.49 ± 0.408

6.587 ± 0.765

4.253 ± 0.878

2.645 ± 0.799

4.409 ± 0.51

12.033 ± 1.226

4.876 ± 0.502

5.913 ± 0.625

0.467 ± 0.083

5.187 ± 0.612
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski