Marinitoga camini virus 1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 7.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 77 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A139ZPG3|A0A139ZPG3_9CAUD Chitin binding protein OS=Marinitoga camini virus 1 OX=1629954 GN=UF08_36 PE=4 SV=1
MM1 pKa = 7.5ALVKK5 pKa = 9.8TDD7 pKa = 3.32YY8 pKa = 11.54GLIYY12 pKa = 10.55NDD14 pKa = 5.02DD15 pKa = 3.69GSLCVTVRR23 pKa = 11.84DD24 pKa = 3.97DD25 pKa = 5.3DD26 pKa = 4.01IPFEE30 pKa = 4.35GVKK33 pKa = 10.46SFAVEE38 pKa = 3.87EE39 pKa = 4.69GTTNLITGDD48 pKa = 3.57SATFATSIGSWVEE61 pKa = 3.29SDD63 pKa = 3.91ANLTITWEE71 pKa = 4.1NIYY74 pKa = 11.21NEE76 pKa = 4.05FLKK79 pKa = 11.02QNGVMRR85 pKa = 11.84YY86 pKa = 9.57RR87 pKa = 11.84KK88 pKa = 7.88TDD90 pKa = 3.28SNNASCRR97 pKa = 11.84INITDD102 pKa = 3.67STLTTYY108 pKa = 10.58SGSIYY113 pKa = 10.24IKK115 pKa = 10.47LISGNINAIRR125 pKa = 11.84PAGVFYY131 pKa = 11.2YY132 pKa = 10.69SDD134 pKa = 3.93NTWTDD139 pKa = 3.65YY140 pKa = 11.53SWVDD144 pKa = 3.11ANGSYY149 pKa = 10.58KK150 pKa = 10.55RR151 pKa = 11.84IIDD154 pKa = 3.87MGNGIYY160 pKa = 10.18RR161 pKa = 11.84IEE163 pKa = 4.27VNNMKK168 pKa = 10.15YY169 pKa = 10.57DD170 pKa = 3.48QTKK173 pKa = 9.74IDD175 pKa = 3.66AGLTISKK182 pKa = 8.96FQIRR186 pKa = 11.84ITSPDD191 pKa = 3.26LVDD194 pKa = 5.0FYY196 pKa = 12.01VLAAQWEE203 pKa = 4.4QKK205 pKa = 10.27PFATSFVDD213 pKa = 3.74GTRR216 pKa = 11.84ADD218 pKa = 4.17GNLQLPWTMDD228 pKa = 2.99GYY230 pKa = 11.68NFVINLFAKK239 pKa = 10.6DD240 pKa = 4.35LFSSTNTNTHH250 pKa = 6.21IFNLGTTGLTDD261 pKa = 3.36VYY263 pKa = 10.79DD264 pKa = 3.57GRR266 pKa = 11.84LILRR270 pKa = 11.84QNNSLFQLYY279 pKa = 9.63IDD281 pKa = 4.84PADD284 pKa = 3.94GSASVSSNTSVASNDD299 pKa = 3.46GKK301 pKa = 10.96YY302 pKa = 10.6HH303 pKa = 6.0MLTVLVEE310 pKa = 4.09ATQARR315 pKa = 11.84LYY317 pKa = 10.49IDD319 pKa = 5.51GIYY322 pKa = 8.87KK323 pKa = 7.77TTLTYY328 pKa = 11.18DD329 pKa = 3.5FTKK332 pKa = 10.88EE333 pKa = 4.01NFDD336 pKa = 4.04KK337 pKa = 11.15LVLGSNISFSPVTAYY352 pKa = 10.69GLISNLYY359 pKa = 8.84IGNYY363 pKa = 9.4DD364 pKa = 3.59PNIWTDD370 pKa = 3.28AFIQEE375 pKa = 4.98LYY377 pKa = 8.71NAKK380 pKa = 10.26RR381 pKa = 11.84PFSVPAKK388 pKa = 10.53LPIII392 pKa = 4.4

Molecular weight: 43.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A139ZPK3|A0A139ZPK3_9CAUD HTH cro/C1-type domain-containing protein OS=Marinitoga camini virus 1 OX=1629954 GN=UF08_76 PE=4 SV=1
MM1 pKa = 7.55KK2 pKa = 10.44GGDD5 pKa = 3.54IMAKK9 pKa = 7.17TNKK12 pKa = 9.12GKK14 pKa = 10.7KK15 pKa = 8.38IVPVKK20 pKa = 10.69SYY22 pKa = 8.34TRR24 pKa = 11.84KK25 pKa = 10.19KK26 pKa = 9.22NGKK29 pKa = 7.72IEE31 pKa = 3.98KK32 pKa = 9.69VRR34 pKa = 11.84GHH36 pKa = 6.44RR37 pKa = 11.84RR38 pKa = 11.84STPNN42 pKa = 2.98

Molecular weight: 4.74 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

77

0

77

15943

41

1373

207.1

23.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.754 ± 0.417

0.452 ± 0.075

5.551 ± 0.258

8.342 ± 0.454

4.88 ± 0.243

5.068 ± 0.262

1.305 ± 0.135

10.287 ± 0.279

11.008 ± 0.545

8.882 ± 0.265

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.007 ± 0.117

7.138 ± 0.254

2.716 ± 0.174

3.023 ± 0.246

3.318 ± 0.283

5.52 ± 0.363

5.231 ± 0.423

4.93 ± 0.229

1.123 ± 0.137

4.466 ± 0.225
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski