Mongoose feces-associated gemycircularvirus a

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Genomoviridae; Gemykibivirus; Gemykibivirus rhina1; Rhinolophus associated gemykibivirus 1

Average proteome isoelectric point is 7.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0E3M076|A0A0E3M076_9VIRU Capsid OS=Mongoose feces-associated gemycircularvirus a OX=1634485 PE=4 SV=1
MM1 pKa = 7.32TFSFNARR8 pKa = 11.84YY9 pKa = 9.72ALLTYY14 pKa = 8.83AQCGTLDD21 pKa = 3.4PWSVVHH27 pKa = 7.01HH28 pKa = 5.91IAEE31 pKa = 4.27LRR33 pKa = 11.84GEE35 pKa = 4.3CIIARR40 pKa = 11.84EE41 pKa = 4.03AHH43 pKa = 6.55ADD45 pKa = 3.57GGTHH49 pKa = 5.97LHH51 pKa = 6.23SFIDD55 pKa = 3.87FGRR58 pKa = 11.84KK59 pKa = 7.99FRR61 pKa = 11.84SRR63 pKa = 11.84RR64 pKa = 11.84ADD66 pKa = 2.96IFDD69 pKa = 3.92VDD71 pKa = 3.78GCHH74 pKa = 6.5PNVSPTHH81 pKa = 5.44STPQAGFDD89 pKa = 3.9YY90 pKa = 10.68ACKK93 pKa = 10.71DD94 pKa = 3.18GDD96 pKa = 3.8IVAGGLSRR104 pKa = 11.84PDD106 pKa = 3.78AGPIPAKK113 pKa = 9.83HH114 pKa = 6.47DD115 pKa = 3.18RR116 pKa = 11.84WHH118 pKa = 7.68DD119 pKa = 3.08ITAAKK124 pKa = 10.16SRR126 pKa = 11.84EE127 pKa = 4.08EE128 pKa = 3.95FFQLLLEE135 pKa = 4.32HH136 pKa = 7.27APRR139 pKa = 11.84DD140 pKa = 3.47LCTSFNSLSKK150 pKa = 10.61YY151 pKa = 9.77ADD153 pKa = 2.51WMYY156 pKa = 11.4RR157 pKa = 11.84DD158 pKa = 4.69DD159 pKa = 4.36PAPYY163 pKa = 10.13KK164 pKa = 10.57HH165 pKa = 7.38DD166 pKa = 4.14DD167 pKa = 3.58QLEE170 pKa = 4.43GSLGPFPEE178 pKa = 4.39LSAWVQGSIDD188 pKa = 3.86EE189 pKa = 4.58LNSLVLYY196 pKa = 10.41GPSRR200 pKa = 11.84MGKK203 pKa = 6.35TLWARR208 pKa = 11.84SHH210 pKa = 6.62GSHH213 pKa = 7.02AYY215 pKa = 10.06FGGLFSLDD223 pKa = 3.79EE224 pKa = 4.41PLQGANYY231 pKa = 10.76AVFDD235 pKa = 5.42DD236 pKa = 4.4INGGIQFFPQYY247 pKa = 10.22KK248 pKa = 8.34WWLGHH253 pKa = 5.19QAQFYY258 pKa = 9.15ATDD261 pKa = 3.41KK262 pKa = 10.98YY263 pKa = 10.53KK264 pKa = 10.88GKK266 pKa = 10.54RR267 pKa = 11.84LIHH270 pKa = 5.94WGKK273 pKa = 8.31PAIWVANDD281 pKa = 3.79DD282 pKa = 3.54PRR284 pKa = 11.84EE285 pKa = 3.83QHH287 pKa = 5.94GADD290 pKa = 4.42RR291 pKa = 11.84EE292 pKa = 4.27WLEE295 pKa = 4.12ANCLFVYY302 pKa = 9.25VHH304 pKa = 6.6SPLYY308 pKa = 10.85SNLVV312 pKa = 3.3

Molecular weight: 35.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0E3M076|A0A0E3M076_9VIRU Capsid OS=Mongoose feces-associated gemycircularvirus a OX=1634485 PE=4 SV=1
MM1 pKa = 7.82AFRR4 pKa = 11.84SRR6 pKa = 11.84YY7 pKa = 7.78SSRR10 pKa = 11.84SRR12 pKa = 11.84RR13 pKa = 11.84RR14 pKa = 11.84PLRR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84YY20 pKa = 9.6RR21 pKa = 11.84KK22 pKa = 8.76IRR24 pKa = 11.84RR25 pKa = 11.84SFRR28 pKa = 11.84RR29 pKa = 11.84GARR32 pKa = 11.84RR33 pKa = 11.84YY34 pKa = 7.33MRR36 pKa = 11.84RR37 pKa = 11.84SMTRR41 pKa = 11.84RR42 pKa = 11.84KK43 pKa = 9.89VADD46 pKa = 3.27IASTKK51 pKa = 10.74CKK53 pKa = 10.89DD54 pKa = 3.45NMLALPLTGDD64 pKa = 3.7LGTPGVAGEE73 pKa = 3.9AAIVQGAFISGYY85 pKa = 9.0LFCPTARR92 pKa = 11.84SSEE95 pKa = 3.92WTEE98 pKa = 3.93GEE100 pKa = 4.25RR101 pKa = 11.84EE102 pKa = 4.15VTRR105 pKa = 11.84QQSRR109 pKa = 11.84VFARR113 pKa = 11.84GYY115 pKa = 9.95KK116 pKa = 9.44EE117 pKa = 4.25RR118 pKa = 11.84INIVTSDD125 pKa = 3.38STNWIWRR132 pKa = 11.84RR133 pKa = 11.84IVFSTHH139 pKa = 3.59NRR141 pKa = 11.84LWEE144 pKa = 4.22AFPPGTVEE152 pKa = 4.27KK153 pKa = 9.93YY154 pKa = 9.28YY155 pKa = 10.87EE156 pKa = 4.57GGTGVFQPGQTRR168 pKa = 11.84AMWNFAPSLGGAPAAAVNYY187 pKa = 10.36AVFEE191 pKa = 4.34GEE193 pKa = 5.8RR194 pKa = 11.84GNDD197 pKa = 2.88WLNFMNATTNKK208 pKa = 9.93KK209 pKa = 9.63FIKK212 pKa = 10.51VMSDD216 pKa = 2.89VTQKK220 pKa = 11.4LEE222 pKa = 4.09GTNDD226 pKa = 3.23RR227 pKa = 11.84PRR229 pKa = 11.84QYY231 pKa = 10.84HH232 pKa = 5.31FNRR235 pKa = 11.84WYY237 pKa = 10.12PFNKK241 pKa = 9.67NFTYY245 pKa = 10.62NEE247 pKa = 4.16KK248 pKa = 10.5EE249 pKa = 4.08RR250 pKa = 11.84GDD252 pKa = 3.79TKK254 pKa = 10.68PSQDD258 pKa = 3.72YY259 pKa = 10.36QSKK262 pKa = 10.22FSSNEE267 pKa = 3.46IGSMGDD273 pKa = 3.4VYY275 pKa = 11.64VLDD278 pKa = 5.11LFNSANGEE286 pKa = 4.07VGNQLGFQCHH296 pKa = 4.73GTYY299 pKa = 9.9YY300 pKa = 9.42WHH302 pKa = 7.23EE303 pKa = 4.14KK304 pKa = 9.62

Molecular weight: 35.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

616

304

312

308.0

35.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.117 ± 0.815

1.461 ± 0.32

6.006 ± 1.611

4.87 ± 0.487

5.844 ± 0.052

8.442 ± 0.075

3.409 ± 1.412

3.734 ± 0.3

4.383 ± 0.372

6.494 ± 1.496

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.786 ± 0.571

4.545 ± 1.15

4.87 ± 0.622

3.571 ± 0.032

8.442 ± 2.072

6.981 ± 0.173

4.87 ± 1.153

4.545 ± 0.484

2.922 ± 0.196

4.708 ± 0.153
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski