Torque teno mini virus 8

Taxonomy: Viruses; Anelloviridae; Betatorquevirus

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q91C94|Q91C94_9VIRU ORF2 OS=Torque teno mini virus 8 OX=687376 PE=4 SV=1
MM1 pKa = 6.56STRR4 pKa = 11.84YY5 pKa = 9.75IPTKK9 pKa = 10.29DD10 pKa = 2.9SHH12 pKa = 5.69RR13 pKa = 11.84QKK15 pKa = 10.86NLKK18 pKa = 8.19WLNFVTHH25 pKa = 6.29AHH27 pKa = 7.53DD28 pKa = 4.22IFCDD32 pKa = 3.76CDD34 pKa = 3.82SPLQHH39 pKa = 5.8TVANILIQEE48 pKa = 4.2PNIKK52 pKa = 10.44FNTQEE57 pKa = 3.75KK58 pKa = 10.72DD59 pKa = 3.46LLKK62 pKa = 10.67KK63 pKa = 10.76CLGEE67 pKa = 4.12TTTTEE72 pKa = 4.1GAGDD76 pKa = 3.76PEE78 pKa = 4.62GFGDD82 pKa = 4.61GDD84 pKa = 4.02LEE86 pKa = 4.58RR87 pKa = 11.84LFTEE91 pKa = 5.07DD92 pKa = 4.61FGEE95 pKa = 4.33EE96 pKa = 3.96DD97 pKa = 3.19TGG99 pKa = 4.08

Molecular weight: 11.22 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q91C94|Q91C94_9VIRU ORF2 OS=Torque teno mini virus 8 OX=687376 PE=4 SV=1
MM1 pKa = 7.79PWRR4 pKa = 11.84NYY6 pKa = 8.37YY7 pKa = 8.77YY8 pKa = 10.24RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84PRR15 pKa = 11.84RR16 pKa = 11.84FWRR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84FRR23 pKa = 11.84TPIYY27 pKa = 9.42RR28 pKa = 11.84RR29 pKa = 11.84FWRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84YY35 pKa = 9.38RR36 pKa = 11.84VRR38 pKa = 11.84KK39 pKa = 8.82RR40 pKa = 11.84HH41 pKa = 5.88FKK43 pKa = 10.65RR44 pKa = 11.84KK45 pKa = 9.28LSKK48 pKa = 10.04LTIQEE53 pKa = 4.02WQPPSIRR60 pKa = 11.84KK61 pKa = 8.27LTIKK65 pKa = 10.42GYY67 pKa = 10.22YY68 pKa = 9.53PLFQSTRR75 pKa = 11.84DD76 pKa = 3.43RR77 pKa = 11.84LSNNMITYY85 pKa = 10.1LEE87 pKa = 4.88SIAPHH92 pKa = 5.51YY93 pKa = 10.59VPGGGGFSISCFSLNTLYY111 pKa = 10.67KK112 pKa = 10.53EE113 pKa = 4.07HH114 pKa = 7.13LKK116 pKa = 10.5LHH118 pKa = 5.54NWWTKK123 pKa = 10.15TNDD126 pKa = 3.19NYY128 pKa = 11.09PLIRR132 pKa = 11.84YY133 pKa = 7.46NGCTLKK139 pKa = 10.73LFKK142 pKa = 10.43SEE144 pKa = 3.83KK145 pKa = 9.1VDD147 pKa = 3.57YY148 pKa = 10.31IFYY151 pKa = 9.01YY152 pKa = 9.07QRR154 pKa = 11.84HH155 pKa = 5.38YY156 pKa = 10.69PMKK159 pKa = 10.46ASALMYY165 pKa = 10.04TSTQPQILLLNNRR178 pKa = 11.84KK179 pKa = 9.94RR180 pKa = 11.84IVKK183 pKa = 10.15CKK185 pKa = 10.64ANNKK189 pKa = 6.93KK190 pKa = 7.91TKK192 pKa = 9.55PYY194 pKa = 9.32IRR196 pKa = 11.84LRR198 pKa = 11.84IPPPSQLKK206 pKa = 7.91TKK208 pKa = 9.47WYY210 pKa = 8.27FQRR213 pKa = 11.84DD214 pKa = 3.53IANLPLLLTIATACSLDD231 pKa = 3.41RR232 pKa = 11.84PYY234 pKa = 11.39LNSQSISNTVGFKK247 pKa = 9.26TLNYY251 pKa = 9.94EE252 pKa = 3.83AFLNRR257 pKa = 11.84GFKK260 pKa = 10.59NIPTTGYY267 pKa = 9.66FPKK270 pKa = 10.47PNTRR274 pKa = 11.84YY275 pKa = 10.08FITQTHH281 pKa = 5.14STDD284 pKa = 3.51PKK286 pKa = 9.94NVPIGSLIFLGNTNLLTLGTKK307 pKa = 9.45IQDD310 pKa = 3.57ACPSSTEE317 pKa = 4.15NEE319 pKa = 3.92WKK321 pKa = 10.34NQFEE325 pKa = 5.16KK326 pKa = 11.16YY327 pKa = 10.43LQTEE331 pKa = 4.55KK332 pKa = 10.88NWGNPFTPEE341 pKa = 3.91YY342 pKa = 10.66LDD344 pKa = 3.71EE345 pKa = 5.11DD346 pKa = 4.56NYY348 pKa = 11.32NIWITNKK355 pKa = 9.19TPQEE359 pKa = 3.82LKK361 pKa = 10.81AKK363 pKa = 10.1YY364 pKa = 9.86KK365 pKa = 11.02SNTDD369 pKa = 3.45KK370 pKa = 11.18LHH372 pKa = 7.29SSDD375 pKa = 4.78TDD377 pKa = 3.76TFWTLKK383 pKa = 10.1RR384 pKa = 11.84VPSVLDD390 pKa = 3.13CRR392 pKa = 11.84YY393 pKa = 10.83NPFRR397 pKa = 11.84DD398 pKa = 3.58DD399 pKa = 3.55NRR401 pKa = 11.84NEE403 pKa = 3.88VYY405 pKa = 10.52LLKK408 pKa = 9.76ITEE411 pKa = 4.15QNSYY415 pKa = 10.94DD416 pKa = 3.53YY417 pKa = 11.04HH418 pKa = 6.73EE419 pKa = 4.76PPKK422 pKa = 10.6PEE424 pKa = 5.76LIAKK428 pKa = 8.13DD429 pKa = 3.97LPLWACLWGYY439 pKa = 10.57IDD441 pKa = 4.06YY442 pKa = 10.5QKK444 pKa = 11.26KK445 pKa = 9.23AATYY449 pKa = 8.67TEE451 pKa = 4.3IDD453 pKa = 3.62TTCICVILSHH463 pKa = 6.98SLDD466 pKa = 3.86PTTHH470 pKa = 5.27TTFIPLDD477 pKa = 3.59EE478 pKa = 5.69DD479 pKa = 3.73FLKK482 pKa = 10.93GQSSFRR488 pKa = 11.84PEE490 pKa = 4.09HH491 pKa = 4.88QTTRR495 pKa = 11.84PDD497 pKa = 3.26EE498 pKa = 4.87LNWHH502 pKa = 6.7PKK504 pKa = 10.12VSFQIQSLNNIACTGPYY521 pKa = 7.83TAKK524 pKa = 10.59LPAGTSIEE532 pKa = 3.67GHH534 pKa = 4.97MQYY537 pKa = 10.94KK538 pKa = 9.31FHH540 pKa = 7.15FKK542 pKa = 10.65LGGSPPPMATLTNPEE557 pKa = 4.24NQPKK561 pKa = 9.78YY562 pKa = 9.77PNPDD566 pKa = 2.85NFLQTTSLQSPTMPIEE582 pKa = 4.45HH583 pKa = 6.64YY584 pKa = 10.44LYY586 pKa = 10.69NFDD589 pKa = 3.83EE590 pKa = 4.55RR591 pKa = 11.84RR592 pKa = 11.84HH593 pKa = 5.61ILTKK597 pKa = 10.51KK598 pKa = 9.95AIKK601 pKa = 10.32RR602 pKa = 11.84MQTDD606 pKa = 3.4KK607 pKa = 10.29EE608 pKa = 4.72TQSSLLQITDD618 pKa = 3.49SASTDD623 pKa = 3.04VPTPYY628 pKa = 10.36TEE630 pKa = 4.4TPTSEE635 pKa = 4.67SEE637 pKa = 4.05DD638 pKa = 3.62SEE640 pKa = 4.93KK641 pKa = 11.19EE642 pKa = 4.1EE643 pKa = 3.81EE644 pKa = 4.25TLQQRR649 pKa = 11.84LLKK652 pKa = 9.11QRR654 pKa = 11.84KK655 pKa = 6.38YY656 pKa = 10.73QKK658 pKa = 9.99QLQRR662 pKa = 11.84GINKK666 pKa = 9.67LLNRR670 pKa = 11.84LANIQQ675 pKa = 3.37

Molecular weight: 79.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

774

99

675

387.0

45.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.101 ± 0.034

1.68 ± 0.645

5.039 ± 2.417

5.297 ± 1.812

4.393 ± 0.796

3.747 ± 2.07

2.584 ± 0.695

5.685 ± 0.303

8.01 ± 0.449

9.69 ± 0.286

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.163 ± 0.073

6.46 ± 0.673

7.106 ± 1.464

4.91 ± 0.415

6.46 ± 1.638

5.814 ± 1.329

9.69 ± 0.679

1.809 ± 0.101

1.938 ± 0.443

5.426 ± 2.109
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski