Amino acid dipepetide frequency for Beihai razor shell virus 4

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
11.18AlaAla: 11.18 ± 0.0
2.699AlaCys: 2.699 ± 0.0
3.855AlaAsp: 3.855 ± 0.0
6.554AlaGlu: 6.554 ± 0.0
1.928AlaPhe: 1.928 ± 0.0
4.626AlaGly: 4.626 ± 0.0
1.157AlaHis: 1.157 ± 0.0
3.47AlaIle: 3.47 ± 0.0
6.554AlaLys: 6.554 ± 0.0
6.939AlaLeu: 6.939 ± 0.0
2.313AlaMet: 2.313 ± 0.0
2.313AlaAsn: 2.313 ± 0.0
3.47AlaPro: 3.47 ± 0.0
1.928AlaGln: 1.928 ± 0.0
6.554AlaArg: 6.554 ± 0.0
4.626AlaSer: 4.626 ± 0.0
5.012AlaThr: 5.012 ± 0.0
6.939AlaVal: 6.939 ± 0.0
0.771AlaTrp: 0.771 ± 0.0
5.012AlaTyr: 5.012 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.928CysAla: 1.928 ± 0.0
0.386CysCys: 0.386 ± 0.0
0.386CysAsp: 0.386 ± 0.0
2.699CysGlu: 2.699 ± 0.0
0.0CysPhe: 0.0 ± 0.0
3.084CysGly: 3.084 ± 0.0
0.0CysHis: 0.0 ± 0.0
1.157CysIle: 1.157 ± 0.0
0.0CysLys: 0.0 ± 0.0
1.542CysLeu: 1.542 ± 0.0
0.386CysMet: 0.386 ± 0.0
0.771CysAsn: 0.771 ± 0.0
0.386CysPro: 0.386 ± 0.0
0.386CysGln: 0.386 ± 0.0
1.928CysArg: 1.928 ± 0.0
0.771CysSer: 0.771 ± 0.0
1.542CysThr: 1.542 ± 0.0
1.542CysVal: 1.542 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.386CysTyr: 0.386 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.012AspAla: 5.012 ± 0.0
1.157AspCys: 1.157 ± 0.0
5.397AspAsp: 5.397 ± 0.0
5.783AspGlu: 5.783 ± 0.0
1.542AspPhe: 1.542 ± 0.0
1.542AspGly: 1.542 ± 0.0
0.771AspHis: 0.771 ± 0.0
0.771AspIle: 0.771 ± 0.0
2.699AspLys: 2.699 ± 0.0
3.084AspLeu: 3.084 ± 0.0
2.699AspMet: 2.699 ± 0.0
3.084AspAsn: 3.084 ± 0.0
1.542AspPro: 1.542 ± 0.0
1.157AspGln: 1.157 ± 0.0
3.47AspArg: 3.47 ± 0.0
3.47AspSer: 3.47 ± 0.0
3.084AspThr: 3.084 ± 0.0
3.47AspVal: 3.47 ± 0.0
0.771AspTrp: 0.771 ± 0.0
1.542AspTyr: 1.542 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
7.71GluAla: 7.71 ± 0.0
0.0GluCys: 0.0 ± 0.0
2.313GluAsp: 2.313 ± 0.0
6.939GluGlu: 6.939 ± 0.0
1.157GluPhe: 1.157 ± 0.0
4.241GluGly: 4.241 ± 0.0
3.084GluHis: 3.084 ± 0.0
2.313GluIle: 2.313 ± 0.0
4.626GluLys: 4.626 ± 0.0
6.554GluLeu: 6.554 ± 0.0
4.626GluMet: 4.626 ± 0.0
2.313GluAsn: 2.313 ± 0.0
1.157GluPro: 1.157 ± 0.0
3.47GluGln: 3.47 ± 0.0
5.397GluArg: 5.397 ± 0.0
5.397GluSer: 5.397 ± 0.0
2.313GluThr: 2.313 ± 0.0
4.241GluVal: 4.241 ± 0.0
1.157GluTrp: 1.157 ± 0.0
3.47GluTyr: 3.47 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.313PheAla: 2.313 ± 0.0
0.771PheCys: 0.771 ± 0.0
0.771PheAsp: 0.771 ± 0.0
1.928PheGlu: 1.928 ± 0.0
0.386PhePhe: 0.386 ± 0.0
1.542PheGly: 1.542 ± 0.0
0.386PheHis: 0.386 ± 0.0
1.157PheIle: 1.157 ± 0.0
1.928PheLys: 1.928 ± 0.0
2.699PheLeu: 2.699 ± 0.0
0.771PheMet: 0.771 ± 0.0
0.386PheAsn: 0.386 ± 0.0
1.928PhePro: 1.928 ± 0.0
0.771PheGln: 0.771 ± 0.0
2.313PheArg: 2.313 ± 0.0
3.47PheSer: 3.47 ± 0.0
2.699PheThr: 2.699 ± 0.0
2.313PheVal: 2.313 ± 0.0
0.0PheTrp: 0.0 ± 0.0
1.542PheTyr: 1.542 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.241GlyAla: 4.241 ± 0.0
1.542GlyCys: 1.542 ± 0.0
1.928GlyAsp: 1.928 ± 0.0
3.855GlyGlu: 3.855 ± 0.0
1.542GlyPhe: 1.542 ± 0.0
4.626GlyGly: 4.626 ± 0.0
1.928GlyHis: 1.928 ± 0.0
3.47GlyIle: 3.47 ± 0.0
2.313GlyLys: 2.313 ± 0.0
5.397GlyLeu: 5.397 ± 0.0
1.542GlyMet: 1.542 ± 0.0
1.542GlyAsn: 1.542 ± 0.0
2.313GlyPro: 2.313 ± 0.0
4.241GlyGln: 4.241 ± 0.0
3.855GlyArg: 3.855 ± 0.0
1.542GlySer: 1.542 ± 0.0
5.783GlyThr: 5.783 ± 0.0
6.168GlyVal: 6.168 ± 0.0
1.928GlyTrp: 1.928 ± 0.0
1.542GlyTyr: 1.542 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.542HisAla: 1.542 ± 0.0
0.771HisCys: 0.771 ± 0.0
1.542HisAsp: 1.542 ± 0.0
3.084HisGlu: 3.084 ± 0.0
1.928HisPhe: 1.928 ± 0.0
1.542HisGly: 1.542 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.157HisIle: 1.157 ± 0.0
0.386HisLys: 0.386 ± 0.0
2.313HisLeu: 2.313 ± 0.0
0.771HisMet: 0.771 ± 0.0
0.386HisAsn: 0.386 ± 0.0
0.771HisPro: 0.771 ± 0.0
1.542HisGln: 1.542 ± 0.0
2.313HisArg: 2.313 ± 0.0
1.157HisSer: 1.157 ± 0.0
1.928HisThr: 1.928 ± 0.0
1.157HisVal: 1.157 ± 0.0
0.386HisTrp: 0.386 ± 0.0
0.0HisTyr: 0.0 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.855IleAla: 3.855 ± 0.0
0.386IleCys: 0.386 ± 0.0
1.157IleAsp: 1.157 ± 0.0
2.313IleGlu: 2.313 ± 0.0
1.928IlePhe: 1.928 ± 0.0
3.084IleGly: 3.084 ± 0.0
1.542IleHis: 1.542 ± 0.0
1.157IleIle: 1.157 ± 0.0
2.699IleLys: 2.699 ± 0.0
3.47IleLeu: 3.47 ± 0.0
1.157IleMet: 1.157 ± 0.0
1.542IleAsn: 1.542 ± 0.0
2.699IlePro: 2.699 ± 0.0
1.542IleGln: 1.542 ± 0.0
3.47IleArg: 3.47 ± 0.0
2.313IleSer: 2.313 ± 0.0
1.157IleThr: 1.157 ± 0.0
5.012IleVal: 5.012 ± 0.0
0.386IleTrp: 0.386 ± 0.0
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.699LysAla: 2.699 ± 0.0
0.386LysCys: 0.386 ± 0.0
3.084LysAsp: 3.084 ± 0.0
3.084LysGlu: 3.084 ± 0.0
1.157LysPhe: 1.157 ± 0.0
3.084LysGly: 3.084 ± 0.0
2.313LysHis: 2.313 ± 0.0
4.626LysIle: 4.626 ± 0.0
3.855LysLys: 3.855 ± 0.0
5.397LysLeu: 5.397 ± 0.0
1.157LysMet: 1.157 ± 0.0
1.157LysAsn: 1.157 ± 0.0
3.084LysPro: 3.084 ± 0.0
3.47LysGln: 3.47 ± 0.0
3.47LysArg: 3.47 ± 0.0
3.084LysSer: 3.084 ± 0.0
2.313LysThr: 2.313 ± 0.0
5.397LysVal: 5.397 ± 0.0
0.771LysTrp: 0.771 ± 0.0
0.771LysTyr: 0.771 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.939LeuAla: 6.939 ± 0.0
1.542LeuCys: 1.542 ± 0.0
6.939LeuAsp: 6.939 ± 0.0
5.397LeuGlu: 5.397 ± 0.0
2.699LeuPhe: 2.699 ± 0.0
8.867LeuGly: 8.867 ± 0.0
1.542LeuHis: 1.542 ± 0.0
1.928LeuIle: 1.928 ± 0.0
5.012LeuLys: 5.012 ± 0.0
7.325LeuLeu: 7.325 ± 0.0
1.542LeuMet: 1.542 ± 0.0
2.699LeuAsn: 2.699 ± 0.0
6.168LeuPro: 6.168 ± 0.0
4.626LeuGln: 4.626 ± 0.0
3.855LeuArg: 3.855 ± 0.0
4.241LeuSer: 4.241 ± 0.0
3.084LeuThr: 3.084 ± 0.0
6.939LeuVal: 6.939 ± 0.0
1.157LeuTrp: 1.157 ± 0.0
3.855LeuTyr: 3.855 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
3.47MetAla: 3.47 ± 0.0
1.157MetCys: 1.157 ± 0.0
1.928MetAsp: 1.928 ± 0.0
2.313MetGlu: 2.313 ± 0.0
0.386MetPhe: 0.386 ± 0.0
0.771MetGly: 0.771 ± 0.0
0.386MetHis: 0.386 ± 0.0
0.771MetIle: 0.771 ± 0.0
1.542MetLys: 1.542 ± 0.0
2.313MetLeu: 2.313 ± 0.0
0.0MetMet: 0.0 ± 0.0
0.771MetAsn: 0.771 ± 0.0
1.542MetPro: 1.542 ± 0.0
1.542MetGln: 1.542 ± 0.0
5.012MetArg: 5.012 ± 0.0
3.47MetSer: 3.47 ± 0.0
0.771MetThr: 0.771 ± 0.0
0.386MetVal: 0.386 ± 0.0
1.928MetTrp: 1.928 ± 0.0
0.771MetTyr: 0.771 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.928AsnAla: 1.928 ± 0.0
0.0AsnCys: 0.0 ± 0.0
0.771AsnAsp: 0.771 ± 0.0
1.542AsnGlu: 1.542 ± 0.0
1.928AsnPhe: 1.928 ± 0.0
1.542AsnGly: 1.542 ± 0.0
1.542AsnHis: 1.542 ± 0.0
1.542AsnIle: 1.542 ± 0.0
0.771AsnLys: 0.771 ± 0.0
4.626AsnLeu: 4.626 ± 0.0
0.386AsnMet: 0.386 ± 0.0
0.771AsnAsn: 0.771 ± 0.0
2.699AsnPro: 2.699 ± 0.0
0.771AsnGln: 0.771 ± 0.0
2.313AsnArg: 2.313 ± 0.0
1.542AsnSer: 1.542 ± 0.0
2.313AsnThr: 2.313 ± 0.0
3.084AsnVal: 3.084 ± 0.0
1.542AsnTrp: 1.542 ± 0.0
1.928AsnTyr: 1.928 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
4.626ProAla: 4.626 ± 0.0
1.157ProCys: 1.157 ± 0.0
3.084ProAsp: 3.084 ± 0.0
2.699ProGlu: 2.699 ± 0.0
1.157ProPhe: 1.157 ± 0.0
3.855ProGly: 3.855 ± 0.0
1.157ProHis: 1.157 ± 0.0
1.928ProIle: 1.928 ± 0.0
3.47ProLys: 3.47 ± 0.0
5.397ProLeu: 5.397 ± 0.0
1.157ProMet: 1.157 ± 0.0
1.157ProAsn: 1.157 ± 0.0
2.313ProPro: 2.313 ± 0.0
2.313ProGln: 2.313 ± 0.0
2.699ProArg: 2.699 ± 0.0
2.313ProSer: 2.313 ± 0.0
2.699ProThr: 2.699 ± 0.0
3.084ProVal: 3.084 ± 0.0
0.386ProTrp: 0.386 ± 0.0
1.157ProTyr: 1.157 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.699GlnAla: 2.699 ± 0.0
0.0GlnCys: 0.0 ± 0.0
1.157GlnAsp: 1.157 ± 0.0
1.928GlnGlu: 1.928 ± 0.0
1.928GlnPhe: 1.928 ± 0.0
1.542GlnGly: 1.542 ± 0.0
0.771GlnHis: 0.771 ± 0.0
1.542GlnIle: 1.542 ± 0.0
2.313GlnLys: 2.313 ± 0.0
3.855GlnLeu: 3.855 ± 0.0
0.771GlnMet: 0.771 ± 0.0
1.542GlnAsn: 1.542 ± 0.0
2.699GlnPro: 2.699 ± 0.0
3.47GlnGln: 3.47 ± 0.0
4.626GlnArg: 4.626 ± 0.0
1.928GlnSer: 1.928 ± 0.0
2.699GlnThr: 2.699 ± 0.0
2.699GlnVal: 2.699 ± 0.0
1.157GlnTrp: 1.157 ± 0.0
1.542GlnTyr: 1.542 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
7.325ArgAla: 7.325 ± 0.0
1.542ArgCys: 1.542 ± 0.0
5.783ArgAsp: 5.783 ± 0.0
3.47ArgGlu: 3.47 ± 0.0
2.699ArgPhe: 2.699 ± 0.0
5.397ArgGly: 5.397 ± 0.0
0.771ArgHis: 0.771 ± 0.0
3.47ArgIle: 3.47 ± 0.0
3.855ArgLys: 3.855 ± 0.0
7.325ArgLeu: 7.325 ± 0.0
3.084ArgMet: 3.084 ± 0.0
1.542ArgAsn: 1.542 ± 0.0
0.771ArgPro: 0.771 ± 0.0
2.699ArgGln: 2.699 ± 0.0
8.481ArgArg: 8.481 ± 0.0
3.084ArgSer: 3.084 ± 0.0
5.397ArgThr: 5.397 ± 0.0
4.241ArgVal: 4.241 ± 0.0
1.157ArgTrp: 1.157 ± 0.0
2.313ArgTyr: 2.313 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.626SerAla: 4.626 ± 0.0
1.542SerCys: 1.542 ± 0.0
3.855SerAsp: 3.855 ± 0.0
4.626SerGlu: 4.626 ± 0.0
1.542SerPhe: 1.542 ± 0.0
2.699SerGly: 2.699 ± 0.0
1.928SerHis: 1.928 ± 0.0
3.084SerIle: 3.084 ± 0.0
3.084SerLys: 3.084 ± 0.0
3.47SerLeu: 3.47 ± 0.0
1.542SerMet: 1.542 ± 0.0
2.313SerAsn: 2.313 ± 0.0
2.313SerPro: 2.313 ± 0.0
1.542SerGln: 1.542 ± 0.0
4.626SerArg: 4.626 ± 0.0
4.626SerSer: 4.626 ± 0.0
3.47SerThr: 3.47 ± 0.0
3.855SerVal: 3.855 ± 0.0
1.157SerTrp: 1.157 ± 0.0
3.084SerTyr: 3.084 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.554ThrAla: 6.554 ± 0.0
1.157ThrCys: 1.157 ± 0.0
2.313ThrAsp: 2.313 ± 0.0
4.241ThrGlu: 4.241 ± 0.0
2.313ThrPhe: 2.313 ± 0.0
3.084ThrGly: 3.084 ± 0.0
1.157ThrHis: 1.157 ± 0.0
3.084ThrIle: 3.084 ± 0.0
3.084ThrLys: 3.084 ± 0.0
5.397ThrLeu: 5.397 ± 0.0
0.771ThrMet: 0.771 ± 0.0
2.699ThrAsn: 2.699 ± 0.0
3.47ThrPro: 3.47 ± 0.0
1.157ThrGln: 1.157 ± 0.0
3.855ThrArg: 3.855 ± 0.0
5.397ThrSer: 5.397 ± 0.0
5.012ThrThr: 5.012 ± 0.0
3.47ThrVal: 3.47 ± 0.0
1.157ThrTrp: 1.157 ± 0.0
1.542ThrTyr: 1.542 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.939ValAla: 6.939 ± 0.0
1.157ValCys: 1.157 ± 0.0
4.626ValAsp: 4.626 ± 0.0
5.012ValGlu: 5.012 ± 0.0
1.928ValPhe: 1.928 ± 0.0
3.47ValGly: 3.47 ± 0.0
1.928ValHis: 1.928 ± 0.0
2.313ValIle: 2.313 ± 0.0
3.084ValLys: 3.084 ± 0.0
5.397ValLeu: 5.397 ± 0.0
3.47ValMet: 3.47 ± 0.0
3.084ValAsn: 3.084 ± 0.0
5.783ValPro: 5.783 ± 0.0
2.699ValGln: 2.699 ± 0.0
3.47ValArg: 3.47 ± 0.0
2.699ValSer: 2.699 ± 0.0
6.554ValThr: 6.554 ± 0.0
3.084ValVal: 3.084 ± 0.0
1.157ValTrp: 1.157 ± 0.0
1.542ValTyr: 1.542 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.386TrpAla: 0.386 ± 0.0
0.771TrpCys: 0.771 ± 0.0
0.386TrpAsp: 0.386 ± 0.0
1.542TrpGlu: 1.542 ± 0.0
1.157TrpPhe: 1.157 ± 0.0
0.771TrpGly: 0.771 ± 0.0
0.386TrpHis: 0.386 ± 0.0
1.157TrpIle: 1.157 ± 0.0
1.157TrpLys: 1.157 ± 0.0
1.928TrpLeu: 1.928 ± 0.0
1.157TrpMet: 1.157 ± 0.0
0.0TrpAsn: 0.0 ± 0.0
1.928TrpPro: 1.928 ± 0.0
0.386TrpGln: 0.386 ± 0.0
1.928TrpArg: 1.928 ± 0.0
1.157TrpSer: 1.157 ± 0.0
1.157TrpThr: 1.157 ± 0.0
0.386TrpVal: 0.386 ± 0.0
1.157TrpTrp: 1.157 ± 0.0
0.771TrpTyr: 0.771 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.928TyrAla: 1.928 ± 0.0
1.157TyrCys: 1.157 ± 0.0
0.771TyrAsp: 0.771 ± 0.0
3.47TyrGlu: 3.47 ± 0.0
0.771TyrPhe: 0.771 ± 0.0
1.928TyrGly: 1.928 ± 0.0
1.928TyrHis: 1.928 ± 0.0
0.771TyrIle: 0.771 ± 0.0
1.928TyrLys: 1.928 ± 0.0
1.928TyrLeu: 1.928 ± 0.0
1.542TyrMet: 1.542 ± 0.0
3.47TyrAsn: 3.47 ± 0.0
0.771TyrPro: 0.771 ± 0.0
1.157TyrGln: 1.157 ± 0.0
0.771TyrArg: 0.771 ± 0.0
2.699TyrSer: 2.699 ± 0.0
1.928TyrThr: 1.928 ± 0.0
1.928TyrVal: 1.928 ± 0.0
1.542TyrTrp: 1.542 ± 0.0
1.542TyrTyr: 1.542 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2595 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski