Archaeoglobus veneficus (strain DSM 11195 / SNP6)

Taxonomy: cellular organisms; Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus; Archaeoglobus veneficus

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2065 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F2KN46|F2KN46_ARCVS Uncharacterized protein OS=Archaeoglobus veneficus (strain DSM 11195 / SNP6) OX=693661 GN=Arcve_0106 PE=4 SV=1
MM1 pKa = 7.75RR2 pKa = 11.84NILVSLLLLGFAAALVGSGTLAYY25 pKa = 10.38FSDD28 pKa = 4.19TEE30 pKa = 4.15TSEE33 pKa = 4.42NNVFGAGMIDD43 pKa = 4.04ISIDD47 pKa = 4.28DD48 pKa = 4.17EE49 pKa = 4.64NPWISNYY56 pKa = 8.11TMEE59 pKa = 5.17DD60 pKa = 3.55LKK62 pKa = 11.03PCEE65 pKa = 4.14TGWINFTIKK74 pKa = 10.52NLEE77 pKa = 3.81KK78 pKa = 10.42DD79 pKa = 4.22DD80 pKa = 3.82PVKK83 pKa = 10.25IYY85 pKa = 10.97KK86 pKa = 9.9HH87 pKa = 6.19INITGYY93 pKa = 10.67DD94 pKa = 3.56GGLHH98 pKa = 6.53PEE100 pKa = 4.13SEE102 pKa = 4.36EE103 pKa = 4.99AEE105 pKa = 4.25DD106 pKa = 6.0LNDD109 pKa = 4.35EE110 pKa = 4.6INDD113 pKa = 3.16IGKK116 pKa = 9.86NITYY120 pKa = 9.38DD121 pKa = 3.42LHH123 pKa = 7.01VAIYY127 pKa = 9.9NEE129 pKa = 4.1TGALVHH135 pKa = 6.17EE136 pKa = 4.5EE137 pKa = 4.09WIIEE141 pKa = 3.9EE142 pKa = 4.35TEE144 pKa = 4.0NVKK147 pKa = 10.41VEE149 pKa = 5.83DD150 pKa = 3.86IDD152 pKa = 5.28CYY154 pKa = 10.35WIYY157 pKa = 11.02LGDD160 pKa = 3.75IPQNGTMVVNQSYY173 pKa = 10.74HH174 pKa = 4.88MQPEE178 pKa = 4.34VTNWAQGDD186 pKa = 3.36IMYY189 pKa = 10.5FDD191 pKa = 4.37IEE193 pKa = 4.34VLATQTNAPAPSPLWPP209 pKa = 4.45

Molecular weight: 23.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F2KR41|F2KR41_ARCVS Other/FunK1 protein kinase OS=Archaeoglobus veneficus (strain DSM 11195 / SNP6) OX=693661 GN=Arcve_0658 PE=4 SV=1
MM1 pKa = 7.34GKK3 pKa = 8.36KK4 pKa = 8.33TVGVKK9 pKa = 10.11KK10 pKa = 10.52RR11 pKa = 11.84LAKK14 pKa = 10.07FLKK17 pKa = 8.88QNRR20 pKa = 11.84RR21 pKa = 11.84APVWITLKK29 pKa = 9.31TKK31 pKa = 10.37RR32 pKa = 11.84RR33 pKa = 11.84VFGSPKK39 pKa = 8.46RR40 pKa = 11.84RR41 pKa = 11.84NWRR44 pKa = 11.84VTKK47 pKa = 10.74LKK49 pKa = 10.8VV50 pKa = 2.92

Molecular weight: 5.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2065

0

2065

558359

31

2522

270.4

30.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.854 ± 0.066

1.275 ± 0.029

5.057 ± 0.034

8.696 ± 0.08

4.231 ± 0.044

7.088 ± 0.044

1.624 ± 0.023

7.756 ± 0.045

7.008 ± 0.06

9.382 ± 0.059

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.52 ± 0.027

3.222 ± 0.049

3.872 ± 0.028

1.748 ± 0.024

5.752 ± 0.055

5.403 ± 0.052

4.35 ± 0.05

8.618 ± 0.046

0.981 ± 0.02

3.564 ± 0.034
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski