Malachra yellow vein mosaic betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite

Average proteome isoelectric point is 5.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0M4ARA7|A0A0M4ARA7_9VIRU C1 OS=Malachra yellow vein mosaic betasatellite OX=1705091 GN=C1 PE=4 SV=1
MM1 pKa = 7.04TRR3 pKa = 11.84SGTTKK8 pKa = 8.99EE9 pKa = 3.97AVRR12 pKa = 11.84FTVDD16 pKa = 2.98VRR18 pKa = 11.84IMEE21 pKa = 3.99NMKK24 pKa = 10.29IFIHH28 pKa = 6.0MSLVSTKK35 pKa = 10.05SPAIIKK41 pKa = 10.45YY42 pKa = 9.47EE43 pKa = 4.38GIVKK47 pKa = 8.12YY48 pKa = 9.02TYY50 pKa = 11.5GDD52 pKa = 3.18MHH54 pKa = 8.1VPFDD58 pKa = 4.19FNGFEE63 pKa = 4.42GNIIANFLFAYY74 pKa = 10.1NGAKK78 pKa = 9.36IQEE81 pKa = 4.19IEE83 pKa = 4.32IEE85 pKa = 4.71DD86 pKa = 3.28IVQRR90 pKa = 11.84LDD92 pKa = 3.65IIVLEE97 pKa = 4.21NPEE100 pKa = 4.2ILGMDD105 pKa = 3.91VIEE108 pKa = 4.67PYY110 pKa = 10.87VFNKK114 pKa = 10.0KK115 pKa = 8.02FTVV118 pKa = 3.26

Molecular weight: 13.57 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0M4ARA7|A0A0M4ARA7_9VIRU C1 OS=Malachra yellow vein mosaic betasatellite OX=1705091 GN=C1 PE=4 SV=1
MM1 pKa = 7.04TRR3 pKa = 11.84SGTTKK8 pKa = 8.99EE9 pKa = 3.97AVRR12 pKa = 11.84FTVDD16 pKa = 2.98VRR18 pKa = 11.84IMEE21 pKa = 3.99NMKK24 pKa = 10.29IFIHH28 pKa = 6.0MSLVSTKK35 pKa = 10.05SPAIIKK41 pKa = 10.45YY42 pKa = 9.47EE43 pKa = 4.38GIVKK47 pKa = 8.12YY48 pKa = 9.02TYY50 pKa = 11.5GDD52 pKa = 3.18MHH54 pKa = 8.1VPFDD58 pKa = 4.19FNGFEE63 pKa = 4.42GNIIANFLFAYY74 pKa = 10.1NGAKK78 pKa = 9.36IQEE81 pKa = 4.19IEE83 pKa = 4.32IEE85 pKa = 4.71DD86 pKa = 3.28IVQRR90 pKa = 11.84LDD92 pKa = 3.65IIVLEE97 pKa = 4.21NPEE100 pKa = 4.2ILGMDD105 pKa = 3.91VIEE108 pKa = 4.67PYY110 pKa = 10.87VFNKK114 pKa = 10.0KK115 pKa = 8.02FTVV118 pKa = 3.26

Molecular weight: 13.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

118

118

118

118.0

13.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.237 ± 0.0

0.0 ± 0.0

5.085 ± 0.0

8.475 ± 0.0

7.627 ± 0.0

5.932 ± 0.0

1.695 ± 0.0

13.559 ± 0.0

6.78 ± 0.0

4.237 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.085 ± 0.0

5.932 ± 0.0

3.39 ± 0.0

1.695 ± 0.0

3.39 ± 0.0

3.39 ± 0.0

5.932 ± 0.0

9.322 ± 0.0

0.0 ± 0.0

4.237 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski