Capybara microvirus Cap1_SP_151

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVQ1|A0A4V1FVQ1_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_151 OX=2585393 PE=4 SV=1
MM1 pKa = 7.66IRR3 pKa = 11.84RR4 pKa = 11.84FWMRR8 pKa = 11.84KK9 pKa = 6.7EE10 pKa = 4.84LIDD13 pKa = 5.4SVEE16 pKa = 4.13TDD18 pKa = 2.82QNTAFRR24 pKa = 11.84IKK26 pKa = 9.78TKK28 pKa = 10.59FNFIVYY34 pKa = 9.02PSNSGSKK41 pKa = 9.32FHH43 pKa = 6.59TKK45 pKa = 10.37YY46 pKa = 10.37EE47 pKa = 4.23YY48 pKa = 9.41KK49 pKa = 7.74TTQGITEE56 pKa = 4.5LVPTEE61 pKa = 4.02EE62 pKa = 4.19VNTYY66 pKa = 11.16NEE68 pKa = 4.04VQSYY72 pKa = 10.02KK73 pKa = 10.75EE74 pKa = 3.65EE75 pKa = 3.87TSIYY79 pKa = 9.98KK80 pKa = 10.12ILDD83 pKa = 2.96RR84 pKa = 11.84MTRR87 pKa = 11.84GDD89 pKa = 4.03YY90 pKa = 10.75SALDD94 pKa = 3.63KK95 pKa = 11.39NQGIFMDD102 pKa = 4.66CTNLPKK108 pKa = 10.49DD109 pKa = 3.61INEE112 pKa = 4.1LTDD115 pKa = 3.46FFNNYY120 pKa = 9.11EE121 pKa = 4.28STFNQADD128 pKa = 3.53PRR130 pKa = 11.84FKK132 pKa = 10.97EE133 pKa = 4.17LFNNNYY139 pKa = 8.95KK140 pKa = 10.17QLIFDD145 pKa = 4.36FQNGTFEE152 pKa = 4.48EE153 pKa = 5.09KK154 pKa = 9.65YY155 pKa = 10.36KK156 pKa = 10.74KK157 pKa = 10.53YY158 pKa = 10.84NEE160 pKa = 4.4LYY162 pKa = 10.68SPEE165 pKa = 4.15KK166 pKa = 10.11LQSNNVVSSEE176 pKa = 4.32PINFEE181 pKa = 3.92NKK183 pKa = 8.97EE184 pKa = 4.14VNDD187 pKa = 3.78NGG189 pKa = 3.92

Molecular weight: 22.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W590|A0A4P8W590_9VIRU Minor capsid protein OS=Capybara microvirus Cap1_SP_151 OX=2585393 PE=4 SV=1
MM1 pKa = 7.1QCFDD5 pKa = 4.5PFVVSNIRR13 pKa = 11.84NPLIQLNYY21 pKa = 9.19KK22 pKa = 9.93ASKK25 pKa = 9.67KK26 pKa = 10.13RR27 pKa = 11.84RR28 pKa = 11.84FAYY31 pKa = 9.11WIKK34 pKa = 10.75FKK36 pKa = 10.72DD37 pKa = 3.28IRR39 pKa = 11.84KK40 pKa = 9.47DD41 pKa = 3.38LLPEE45 pKa = 3.59VLEE48 pKa = 4.54RR49 pKa = 11.84IKK51 pKa = 11.26NKK53 pKa = 10.58DD54 pKa = 3.32MLLIPCGRR62 pKa = 11.84CFSCRR67 pKa = 11.84SKK69 pKa = 11.14KK70 pKa = 10.45AMSWTIRR77 pKa = 11.84NYY79 pKa = 10.29FEE81 pKa = 4.71SEE83 pKa = 4.28KK84 pKa = 10.71YY85 pKa = 9.82DD86 pKa = 3.34QKK88 pKa = 11.52CFITATYY95 pKa = 11.16NEE97 pKa = 4.63FKK99 pKa = 10.74CPRR102 pKa = 11.84FLVKK106 pKa = 10.1KK107 pKa = 10.28DD108 pKa = 3.42LQLLIKK114 pKa = 9.82QIRR117 pKa = 11.84RR118 pKa = 11.84YY119 pKa = 9.3IDD121 pKa = 3.02YY122 pKa = 10.35HH123 pKa = 8.03ISSDD127 pKa = 3.45MKK129 pKa = 10.42IKK131 pKa = 10.8YY132 pKa = 7.35FACGEE137 pKa = 4.04YY138 pKa = 10.37GGQFGRR144 pKa = 11.84PHH146 pKa = 5.83FHH148 pKa = 6.36ILLYY152 pKa = 10.19GFCFPKK158 pKa = 10.7DD159 pKa = 3.69HH160 pKa = 6.93ILKK163 pKa = 10.59DD164 pKa = 3.73EE165 pKa = 4.39NGKK168 pKa = 9.79KK169 pKa = 10.09EE170 pKa = 4.15YY171 pKa = 10.1ISLKK175 pKa = 9.74LTEE178 pKa = 4.18LWNRR182 pKa = 11.84GIISFSDD189 pKa = 3.86CVDD192 pKa = 3.3ASHH195 pKa = 7.42IKK197 pKa = 8.0YY198 pKa = 8.01TCGYY202 pKa = 7.17VQKK205 pKa = 10.43KK206 pKa = 9.68LFHH209 pKa = 6.9IYY211 pKa = 10.58SDD213 pKa = 3.92AEE215 pKa = 4.18KK216 pKa = 10.89KK217 pKa = 10.55LLQDD221 pKa = 4.15WIEE224 pKa = 4.04LHH226 pKa = 6.96PDD228 pKa = 3.01DD229 pKa = 5.63HH230 pKa = 6.91FQDD233 pKa = 4.29SFITCSKK240 pKa = 10.86GIGLEE245 pKa = 4.04FFDD248 pKa = 3.75KK249 pKa = 10.97NKK251 pKa = 10.66YY252 pKa = 9.92NIYY255 pKa = 10.43NDD257 pKa = 3.48NEE259 pKa = 4.36FLFHH263 pKa = 7.15PPFDD267 pKa = 4.12SSPVKK272 pKa = 10.06HH273 pKa = 6.22VKK275 pKa = 9.34PLPYY279 pKa = 9.47FDD281 pKa = 5.44YY282 pKa = 11.14RR283 pKa = 11.84MQNVDD288 pKa = 3.52YY289 pKa = 11.01NLYY292 pKa = 10.3AHH294 pKa = 6.78SKK296 pKa = 9.58FLRR299 pKa = 11.84SEE301 pKa = 4.12YY302 pKa = 10.75NEE304 pKa = 3.84NYY306 pKa = 9.51YY307 pKa = 11.04KK308 pKa = 10.81KK309 pKa = 10.35FLEE312 pKa = 4.37DD313 pKa = 3.58DD314 pKa = 3.73RR315 pKa = 11.84SISEE319 pKa = 3.81IMRR322 pKa = 11.84AEE324 pKa = 3.76EE325 pKa = 5.29DD326 pKa = 3.88YY327 pKa = 11.58ALKK330 pKa = 10.56NYY332 pKa = 10.37KK333 pKa = 9.73LYY335 pKa = 10.84KK336 pKa = 9.06YY337 pKa = 10.08IRR339 pKa = 11.84RR340 pKa = 3.86

Molecular weight: 41.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1440

189

560

360.0

41.05

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.25 ± 1.598

1.667 ± 0.451

6.25 ± 0.354

4.653 ± 1.205

5.903 ± 0.865

5.139 ± 0.86

2.014 ± 0.469

6.667 ± 0.35

7.083 ± 1.569

7.153 ± 0.419

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.639 ± 0.336

7.222 ± 0.899

4.375 ± 0.797

3.611 ± 0.308

3.958 ± 0.443

9.653 ± 1.662

4.653 ± 0.874

4.167 ± 0.67

0.833 ± 0.173

6.111 ± 0.626
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski