Chondrostereum purpureum cryptic virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Alphapartitivirus

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B7ZGY9|B7ZGY9_9VIRU Coat protein OS=Chondrostereum purpureum cryptic virus 1 OX=529380 GN=CP PE=4 SV=1
MM1 pKa = 7.34SLSSGPVSQAVLTASEE17 pKa = 4.38PAVPAPVEE25 pKa = 4.06YY26 pKa = 10.36RR27 pKa = 11.84PGATQPDD34 pKa = 3.79ATGTMTQTASGTANAIFQSGATTAPEE60 pKa = 3.83QPPVLIHH67 pKa = 6.52VSDD70 pKa = 4.08DD71 pKa = 3.41AKK73 pKa = 11.44SNEE76 pKa = 4.06KK77 pKa = 9.91MSAIDD82 pKa = 3.05ITRR85 pKa = 11.84IAICYY90 pKa = 8.87PMSTDD95 pKa = 3.48SVLVPSWFLPSSRR108 pKa = 11.84YY109 pKa = 9.57LYY111 pKa = 10.4RR112 pKa = 11.84IVQEE116 pKa = 3.91MDD118 pKa = 2.87IIMLNTHH125 pKa = 7.15RR126 pKa = 11.84FTQSVHH132 pKa = 4.79AWSPLVSRR140 pKa = 11.84VYY142 pKa = 10.2IAVLFWIQTIRR153 pKa = 11.84CMQATGFLPRR163 pKa = 11.84EE164 pKa = 4.46GIAFINEE171 pKa = 4.22LLQDD175 pKa = 4.3FPARR179 pKa = 11.84TLVVPGPLVSLFRR192 pKa = 11.84SLCASSPSFGTYY204 pKa = 10.45GDD206 pKa = 3.7VFPAFEE212 pKa = 4.12TAGIGASPANCFTLNSARR230 pKa = 11.84FPQWYY235 pKa = 8.37MLMPNVALLLDD246 pKa = 3.64QLTCFTQACVNNPATIGDD264 pKa = 4.02FVIGDD269 pKa = 4.34DD270 pKa = 4.91LFGTPFDD277 pKa = 3.93GTIGSHH283 pKa = 5.01RR284 pKa = 11.84QQRR287 pKa = 11.84VAPGMTEE294 pKa = 3.4PVYY297 pKa = 10.86FNTKK301 pKa = 9.35AAEE304 pKa = 3.98NHH306 pKa = 5.36ASMRR310 pKa = 11.84NLMALPTRR318 pKa = 11.84LNYY321 pKa = 10.38DD322 pKa = 3.53PQNATPLTLNEE333 pKa = 4.02MFRR336 pKa = 11.84FNTDD340 pKa = 2.41KK341 pKa = 10.85RR342 pKa = 11.84WFSRR346 pKa = 11.84IISTMTVYY354 pKa = 10.95SKK356 pKa = 10.97FFDD359 pKa = 4.15GSVTLYY365 pKa = 9.12EE366 pKa = 4.82CPPVGPPAAQVSMVRR381 pKa = 11.84TQPMRR386 pKa = 11.84FEE388 pKa = 4.76ASNTAQAMEE397 pKa = 4.38TEE399 pKa = 4.69SFEE402 pKa = 4.21STAISVNRR410 pKa = 11.84SLSLHH415 pKa = 6.02DD416 pKa = 4.26EE417 pKa = 4.32KK418 pKa = 11.52VALAALINEE427 pKa = 4.61TLVSTGDD434 pKa = 3.46QPIYY438 pKa = 10.06AAQRR442 pKa = 11.84LGPFWNISPTRR453 pKa = 11.84RR454 pKa = 11.84QAYY457 pKa = 9.4RR458 pKa = 11.84FDD460 pKa = 3.87PSFVLPSVIRR470 pKa = 11.84DD471 pKa = 3.75HH472 pKa = 6.79YY473 pKa = 11.71ALTTATRR480 pKa = 3.54

Molecular weight: 52.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B7ZGY9|B7ZGY9_9VIRU Coat protein OS=Chondrostereum purpureum cryptic virus 1 OX=529380 GN=CP PE=4 SV=1
MM1 pKa = 7.95RR2 pKa = 11.84FTEE5 pKa = 4.44YY6 pKa = 10.19ILSGFKK12 pKa = 10.84VLDD15 pKa = 3.48SSMDD19 pKa = 3.13RR20 pKa = 11.84SRR22 pKa = 11.84NYY24 pKa = 10.46QFIGFDD30 pKa = 3.61KK31 pKa = 11.0PEE33 pKa = 4.25SQPPADD39 pKa = 3.71ATMHH43 pKa = 6.5HH44 pKa = 7.03AVQAPVKK51 pKa = 9.59HH52 pKa = 6.15AMRR55 pKa = 11.84KK56 pKa = 8.85ILLHH60 pKa = 6.22NEE62 pKa = 4.01FVHH65 pKa = 5.8ITTKK69 pKa = 10.66FKK71 pKa = 10.87RR72 pKa = 11.84STIDD76 pKa = 3.22DD77 pKa = 3.74SSITEE82 pKa = 4.15AFFKK86 pKa = 11.09GDD88 pKa = 3.57LPYY91 pKa = 10.99HH92 pKa = 6.38KK93 pKa = 10.26VPKK96 pKa = 10.19DD97 pKa = 3.36GSYY100 pKa = 10.8QRR102 pKa = 11.84ALAATMQVFAPQVPIKK118 pKa = 9.72PVHH121 pKa = 5.6YY122 pKa = 9.95CDD124 pKa = 4.32LRR126 pKa = 11.84YY127 pKa = 10.18YY128 pKa = 9.15PWKK131 pKa = 10.17LRR133 pKa = 11.84PSAEE137 pKa = 4.58LPFTDD142 pKa = 5.7DD143 pKa = 3.13PALFKK148 pKa = 10.5RR149 pKa = 11.84VQHH152 pKa = 5.54AAEE155 pKa = 4.51RR156 pKa = 11.84KK157 pKa = 8.91QIPDD161 pKa = 2.79KK162 pKa = 11.15RR163 pKa = 11.84MSFGNLYY170 pKa = 10.35NHH172 pKa = 6.65IFEE175 pKa = 4.3YY176 pKa = 10.42LRR178 pKa = 11.84PIIHH182 pKa = 6.55YY183 pKa = 9.38IKK185 pKa = 10.57NGPFHH190 pKa = 7.03LPFKK194 pKa = 10.02TSWPQDD200 pKa = 3.45DD201 pKa = 5.14YY202 pKa = 10.25LTPMRR207 pKa = 11.84SHH209 pKa = 6.71ARR211 pKa = 11.84SAIQPISDD219 pKa = 3.73PNKK222 pKa = 7.97VRR224 pKa = 11.84FVYY227 pKa = 9.7GYY229 pKa = 9.01PKK231 pKa = 10.72VGIFPQAMFFWPLFVYY247 pKa = 8.24YY248 pKa = 9.9HH249 pKa = 6.32ITGQSPLLWGYY260 pKa = 7.75EE261 pKa = 3.99TMTGGWYY268 pKa = 10.39RR269 pKa = 11.84LNHH272 pKa = 6.05EE273 pKa = 4.67LRR275 pKa = 11.84STPGISGSILEE286 pKa = 4.97LDD288 pKa = 3.29WQGFDD293 pKa = 2.56IHH295 pKa = 8.38ALFEE299 pKa = 4.3VFDD302 pKa = 5.14DD303 pKa = 4.17IKK305 pKa = 11.04NLSWSFFDD313 pKa = 5.15CSHH316 pKa = 6.9GYY318 pKa = 9.79QPTKK322 pKa = 10.53DD323 pKa = 3.89YY324 pKa = 11.37QGTSCDD330 pKa = 3.57PDD332 pKa = 3.21RR333 pKa = 11.84LKK335 pKa = 11.14NLWEE339 pKa = 4.6WIWFSIKK346 pKa = 9.1YY347 pKa = 8.22TPIRR351 pKa = 11.84LPDD354 pKa = 3.13GRR356 pKa = 11.84LFRR359 pKa = 11.84RR360 pKa = 11.84SWRR363 pKa = 11.84GVPSGLFITQWLDD376 pKa = 3.24SVYY379 pKa = 9.86NCIMIFTILDD389 pKa = 3.24AMGFEE394 pKa = 4.4ITSDD398 pKa = 4.34LIIKK402 pKa = 9.68VLGDD406 pKa = 3.79DD407 pKa = 3.33SLTRR411 pKa = 11.84LRR413 pKa = 11.84LLIPYY418 pKa = 7.94DD419 pKa = 3.17QHH421 pKa = 5.73EE422 pKa = 4.5AFTIRR427 pKa = 11.84FKK429 pKa = 11.15HH430 pKa = 5.21LAQYY434 pKa = 10.95YY435 pKa = 9.21FDD437 pKa = 5.39AVLSDD442 pKa = 3.39KK443 pKa = 10.66KK444 pKa = 11.22SRR446 pKa = 11.84IHH448 pKa = 5.58NTLNGVKK455 pKa = 10.42CLGYY459 pKa = 10.39RR460 pKa = 11.84NNNGLPVRR468 pKa = 11.84DD469 pKa = 3.92RR470 pKa = 11.84EE471 pKa = 4.41SLLTALLYY479 pKa = 10.31PKK481 pKa = 10.28ARR483 pKa = 11.84RR484 pKa = 11.84PTFEE488 pKa = 3.85QLKK491 pKa = 9.86ARR493 pKa = 11.84CIGIAYY499 pKa = 9.73ASAGNDD505 pKa = 3.21PTTLEE510 pKa = 4.08VCKK513 pKa = 10.53DD514 pKa = 3.26VYY516 pKa = 11.23DD517 pKa = 3.95YY518 pKa = 11.88LDD520 pKa = 3.63AKK522 pKa = 10.2GIKK525 pKa = 9.72ADD527 pKa = 3.87PAGLADD533 pKa = 5.77LFDD536 pKa = 5.73PNLGLDD542 pKa = 3.11IDD544 pKa = 3.79ITFFPNILTIQRR556 pKa = 11.84SLLILRR562 pKa = 11.84DD563 pKa = 3.52SRR565 pKa = 11.84EE566 pKa = 3.81QAHH569 pKa = 6.4RR570 pKa = 11.84MWPTSHH576 pKa = 7.23FLSPIPGLVDD586 pKa = 3.12II587 pKa = 5.55

Molecular weight: 68.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1067

480

587

533.5

60.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.591 ± 1.53

1.312 ± 0.093

5.998 ± 1.163

3.374 ± 0.239

6.186 ± 0.224

4.967 ± 0.244

2.624 ± 0.741

6.373 ± 0.74

3.561 ± 1.468

8.903 ± 0.759

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.718 ± 0.523

3.561 ± 0.385

7.591 ± 0.339

4.03 ± 0.352

5.998 ± 0.237

7.404 ± 0.855

6.842 ± 1.345

5.155 ± 0.961

1.781 ± 0.337

4.03 ± 0.707
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski