Asticcacaulis taihuensis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis

Average proteome isoelectric point is 6.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3569 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G4PFH0|A0A1G4PFH0_9CAUL Probable cytosol aminopeptidase OS=Asticcacaulis taihuensis OX=260084 GN=pepA PE=3 SV=1
MM1 pKa = 7.94RR2 pKa = 11.84KK3 pKa = 9.49HH4 pKa = 6.39SLLTATALGLVLGSGGLGTQALAEE28 pKa = 4.3TSISTATTTPLVTSSAGDD46 pKa = 3.47LTVTSDD52 pKa = 3.65GSITLTSGTAITVDD66 pKa = 3.76SDD68 pKa = 3.32NSLDD72 pKa = 3.92FEE74 pKa = 4.8GSIAMSGSEE83 pKa = 4.08SSSTGILITDD93 pKa = 4.52FPDD96 pKa = 3.3RR97 pKa = 11.84TKK99 pKa = 11.42GLVLTGDD106 pKa = 3.21ITVTDD111 pKa = 5.36DD112 pKa = 3.31YY113 pKa = 10.57TASDD117 pKa = 3.8TTSLDD122 pKa = 3.38GTEE125 pKa = 5.26DD126 pKa = 4.43GYY128 pKa = 9.82TDD130 pKa = 4.11APWAEE135 pKa = 3.93GTGRR139 pKa = 11.84YY140 pKa = 9.12GIHH143 pKa = 5.83STGASPFVGDD153 pKa = 4.08VYY155 pKa = 10.28ITSDD159 pKa = 3.38SVIDD163 pKa = 3.71VEE165 pKa = 5.47GNQSYY170 pKa = 10.57GIRR173 pKa = 11.84FEE175 pKa = 4.15NQIKK179 pKa = 10.32GAFTYY184 pKa = 10.5DD185 pKa = 2.98GAMTLIGDD193 pKa = 3.81NSTGISLEE201 pKa = 3.9KK202 pKa = 10.59GVTGNVYY209 pKa = 10.49LSGSVGVLGANASAITLAGDD229 pKa = 3.93LGGNLIIDD237 pKa = 4.26GSYY240 pKa = 10.77SGTAYY245 pKa = 10.8SSTSALTQAVYY256 pKa = 11.06EE257 pKa = 4.1NLIPANNLLQVGPLVSIAGNVANGVLFGASVTSTDD292 pKa = 5.16DD293 pKa = 3.6SNTDD297 pKa = 3.12EE298 pKa = 5.92DD299 pKa = 5.48GDD301 pKa = 4.21GLTDD305 pKa = 4.04TVQSTASLTQYY316 pKa = 10.97GSAPALAIGSASSDD330 pKa = 2.86ITLGGLTYY338 pKa = 10.92ASTAIDD344 pKa = 4.22PPSVNYY350 pKa = 10.56GLLNRR355 pKa = 11.84GSIGAYY361 pKa = 9.15GVHH364 pKa = 6.82PGVNATALQIGGTGYY379 pKa = 7.61PTTIEE384 pKa = 4.03NGIGNAGSITASSYY398 pKa = 11.06GGNATAISLLSGATTPRR415 pKa = 11.84LDD417 pKa = 3.3IDD419 pKa = 3.89GTVTATTTRR428 pKa = 11.84YY429 pKa = 7.8LTSAEE434 pKa = 4.15DD435 pKa = 3.74ADD437 pKa = 4.28GNTVYY442 pKa = 10.14TVSNVGEE449 pKa = 4.05ATAVSIASGATLPAINVAASSGIYY473 pKa = 10.01ASSSGSTGSATAISDD488 pKa = 3.51TSGTLTSISNSGTISATITASDD510 pKa = 4.3DD511 pKa = 4.42DD512 pKa = 5.21GDD514 pKa = 4.18GTTDD518 pKa = 4.07TITGKK523 pKa = 8.83ATAIDD528 pKa = 3.84VSTNTTGVTITQTDD542 pKa = 3.51NNATDD547 pKa = 3.62SDD549 pKa = 4.22DD550 pKa = 5.0DD551 pKa = 3.91EE552 pKa = 7.45AIAAPYY558 pKa = 9.94IYY560 pKa = 10.88GNILFGSGNDD570 pKa = 3.73TLSSSGGYY578 pKa = 9.63IYY580 pKa = 11.2GNVDD584 pKa = 3.06YY585 pKa = 10.87GAGTGSFSLTNDD597 pKa = 2.76AVYY600 pKa = 10.42LGKK603 pKa = 8.94LTSSGDD609 pKa = 3.0IAMDD613 pKa = 3.45IDD615 pKa = 4.05SGASAGLLAGSSVRR629 pKa = 11.84MSTLHH634 pKa = 6.02VGSDD638 pKa = 3.07SSMALTLAVDD648 pKa = 4.27TPTVPILSGSGAVAFDD664 pKa = 4.83DD665 pKa = 4.72GAKK668 pKa = 10.42LYY670 pKa = 8.65LTLDD674 pKa = 4.56KK675 pKa = 10.78ILSTPTSFTVLTGSSISLGDD695 pKa = 3.6MTTSTLDD702 pKa = 3.22GYY704 pKa = 10.55IPYY707 pKa = 9.88LYY709 pKa = 10.69HH710 pKa = 7.96SDD712 pKa = 3.35LTLNDD717 pKa = 3.51TDD719 pKa = 4.16TVLTANFRR727 pKa = 11.84LKK729 pKa = 9.33TQGEE733 pKa = 4.2AGYY736 pKa = 10.88SSNQYY741 pKa = 9.52AALMPVLVVVAEE753 pKa = 4.27DD754 pKa = 3.13SGARR758 pKa = 11.84SSLLAATDD766 pKa = 3.52KK767 pKa = 11.41DD768 pKa = 4.61AFDD771 pKa = 3.55QVYY774 pKa = 9.77NQYY777 pKa = 11.0LPDD780 pKa = 3.63YY781 pKa = 9.84SGEE784 pKa = 4.05NLISLSVGSASLNRR798 pKa = 11.84SLSNLTLIPDD808 pKa = 4.06NNGGQYY814 pKa = 9.34WLQEE818 pKa = 3.52YY819 pKa = 10.18GYY821 pKa = 9.9AINRR825 pKa = 11.84AYY827 pKa = 11.08SDD829 pKa = 3.34TAGFKK834 pKa = 9.49STGFSFAGGRR844 pKa = 11.84EE845 pKa = 3.84KK846 pKa = 10.4QVYY849 pKa = 7.91GNQMVGTYY857 pKa = 10.56LSITSASPRR866 pKa = 11.84DD867 pKa = 4.0TFALAAEE874 pKa = 4.72GMSNSDD880 pKa = 3.69LTIGAYY886 pKa = 8.5WRR888 pKa = 11.84LNTSGLKK895 pKa = 9.94AWLHH899 pKa = 6.25AGAGYY904 pKa = 8.18DD905 pKa = 3.55TFKK908 pKa = 10.05STRR911 pKa = 11.84NILTTTVDD919 pKa = 3.52HH920 pKa = 6.32VATAKK925 pKa = 9.47WDD927 pKa = 4.13GYY929 pKa = 9.98SVSAGTGASYY939 pKa = 11.52DD940 pKa = 3.65FLLGKK945 pKa = 9.13WAVTPEE951 pKa = 3.95VLADD955 pKa = 3.39YY956 pKa = 10.28YY957 pKa = 10.9QLHH960 pKa = 6.67EE961 pKa = 4.62NDD963 pKa = 3.6HH964 pKa = 6.07TEE966 pKa = 4.13SGGGDD971 pKa = 3.66YY972 pKa = 11.07FDD974 pKa = 4.31LTVGARR980 pKa = 11.84DD981 pKa = 3.52GHH983 pKa = 6.41LLSSTALLNLSYY995 pKa = 9.62RR996 pKa = 11.84TSFLKK1001 pKa = 10.51PEE1003 pKa = 3.68MWVGYY1008 pKa = 8.66KK1009 pKa = 10.19QNISATLPDD1018 pKa = 3.66TVANFTGGDD1027 pKa = 3.46SFTLVGGNIEE1037 pKa = 4.2GGGPVAGFRR1046 pKa = 11.84LSADD1050 pKa = 3.05NPYY1053 pKa = 10.9SYY1055 pKa = 11.11FSIEE1059 pKa = 3.92AEE1061 pKa = 4.07YY1062 pKa = 11.03QEE1064 pKa = 4.58LPEE1067 pKa = 4.07YY1068 pKa = 10.46TNTSVSLRR1076 pKa = 11.84TRR1078 pKa = 11.84FQFF1081 pKa = 4.0

Molecular weight: 110.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G4PWI4|A0A1G4PWI4_9CAUL EF hand OS=Asticcacaulis taihuensis OX=260084 GN=SAMN02927928_0703 PE=4 SV=1
MM1 pKa = 7.29KK2 pKa = 10.41RR3 pKa = 11.84SLTNRR8 pKa = 11.84ATQVLDD14 pKa = 4.01LLPFAQLLTRR24 pKa = 11.84RR25 pKa = 11.84PPSGKK30 pKa = 10.17LLTAAALVNSPMANRR45 pKa = 11.84LPPRR49 pKa = 11.84LVGFAKK55 pKa = 10.26IAVAALAVGSVIAGARR71 pKa = 11.84QRR73 pKa = 11.84PGFKK77 pKa = 8.66WHH79 pKa = 5.5QRR81 pKa = 3.32

Molecular weight: 8.75 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3569

0

3569

1177575

39

2501

329.9

35.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.717 ± 0.05

0.812 ± 0.012

6.022 ± 0.032

5.244 ± 0.039

3.791 ± 0.026

8.23 ± 0.034

2.119 ± 0.019

5.319 ± 0.028

4.144 ± 0.028

9.934 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.516 ± 0.021

3.094 ± 0.029

5.062 ± 0.036

3.419 ± 0.025

5.971 ± 0.039

5.709 ± 0.035

5.772 ± 0.049

6.972 ± 0.032

1.435 ± 0.018

2.718 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski