Tortoise microvirus 80

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8WA79|A0A4P8WA79_9VIRU Uncharacterized protein OS=Tortoise microvirus 80 OX=2583188 PE=4 SV=1
MM1 pKa = 7.71LFLPILSLSIYY12 pKa = 10.05LIRR15 pKa = 11.84RR16 pKa = 11.84FLMTSKK22 pKa = 10.91DD23 pKa = 4.26FIPSSMFGTDD33 pKa = 3.33DD34 pKa = 3.51YY35 pKa = 12.25VNINASIIVDD45 pKa = 3.29KK46 pKa = 10.93RR47 pKa = 11.84LSHH50 pKa = 5.81VVNSLVSRR58 pKa = 11.84GKK60 pKa = 10.25EE61 pKa = 3.9VFPSLPVSSNPLLANYY77 pKa = 9.6EE78 pKa = 4.17YY79 pKa = 10.98FNAVCSLALYY89 pKa = 10.29YY90 pKa = 10.64YY91 pKa = 10.83FDD93 pKa = 3.8MLGVLSPSEE102 pKa = 4.22IAPSTPDD109 pKa = 2.97VDD111 pKa = 5.69DD112 pKa = 4.44DD113 pKa = 4.34SKK115 pKa = 11.43YY116 pKa = 9.82QEE118 pKa = 4.23EE119 pKa = 4.89FPFEE123 pKa = 4.17NYY125 pKa = 9.99

Molecular weight: 14.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8WA79|A0A4P8WA79_9VIRU Uncharacterized protein OS=Tortoise microvirus 80 OX=2583188 PE=4 SV=1
MM1 pKa = 7.26TLNIRR6 pKa = 11.84RR7 pKa = 11.84NFPLKK12 pKa = 9.8TIRR15 pKa = 11.84SNPSQPSSTATGRR28 pKa = 11.84RR29 pKa = 11.84LIPQRR34 pKa = 11.84QPAVDD39 pKa = 3.56SSFSRR44 pKa = 11.84SEE46 pKa = 3.7NSLLRR51 pKa = 11.84GKK53 pKa = 10.41CPALHH58 pKa = 6.28CTATPCVSRR67 pKa = 11.84TYY69 pKa = 11.38GLRR72 pKa = 11.84CYY74 pKa = 10.47CAVQFRR80 pKa = 11.84ALVAII85 pKa = 4.92

Molecular weight: 9.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

1731

73

571

216.4

24.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.395 ± 1.051

1.444 ± 0.777

6.355 ± 0.452

5.026 ± 1.006

5.373 ± 0.578

5.026 ± 0.492

1.964 ± 0.472

4.622 ± 0.634

4.795 ± 1.118

9.301 ± 0.555

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.6 ± 0.395

4.853 ± 0.384

5.373 ± 0.543

4.622 ± 1.02

5.199 ± 0.648

8.781 ± 0.845

6.355 ± 1.003

5.546 ± 0.599

0.982 ± 0.187

4.391 ± 0.702
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski