Turkey adenovirus 3

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Siadenovirus; Turkey siadenovirus A

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 24 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9YUQ3|Q9YUQ3_9ADEN ORF7 OS=Turkey adenovirus 3 OX=41678 GN=ORF7 PE=4 SV=1
MM1 pKa = 8.16DD2 pKa = 4.0VGEE5 pKa = 4.77SDD7 pKa = 4.68NEE9 pKa = 4.1VEE11 pKa = 4.63DD12 pKa = 5.4RR13 pKa = 11.84RR14 pKa = 11.84IQVPKK19 pKa = 10.14VHH21 pKa = 6.04STNPFSSGSRR31 pKa = 11.84EE32 pKa = 4.08TMPTPSSTRR41 pKa = 11.84FVYY44 pKa = 10.12VLKK47 pKa = 10.23TEE49 pKa = 4.42DD50 pKa = 4.6DD51 pKa = 3.68EE52 pKa = 5.53TIMLEE57 pKa = 3.87NTGTFKK63 pKa = 10.89LSEE66 pKa = 4.23YY67 pKa = 11.0NFGKK71 pKa = 10.63LFDD74 pKa = 4.98DD75 pKa = 4.37FDD77 pKa = 4.32VVTLEE82 pKa = 3.92MSLGFHH88 pKa = 7.1YY89 pKa = 10.43MFDD92 pKa = 3.46YY93 pKa = 10.55MLDD96 pKa = 3.92VKK98 pKa = 9.99WPNVDD103 pKa = 4.44FEE105 pKa = 4.81YY106 pKa = 10.64TVNVYY111 pKa = 7.27TEE113 pKa = 4.02RR114 pKa = 11.84RR115 pKa = 11.84IALYY119 pKa = 10.34DD120 pKa = 4.15LEE122 pKa = 6.49NIDD125 pKa = 3.73YY126 pKa = 8.17WPCVLAWCAFQCISNGVNFFDD147 pKa = 3.86HH148 pKa = 6.01VRR150 pKa = 11.84LVGEE154 pKa = 4.39DD155 pKa = 3.11HH156 pKa = 6.67SLPYY160 pKa = 9.75GTVFAA165 pKa = 5.64

Molecular weight: 19.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9YUR9|Q9YUR9_9ADEN Uncharacterized protein OS=Turkey adenovirus 3 OX=41678 PE=4 SV=1
MM1 pKa = 7.79PFFYY5 pKa = 10.74LVGAGSAYY13 pKa = 10.27CEE15 pKa = 4.03RR16 pKa = 11.84CKK18 pKa = 10.38EE19 pKa = 4.08VCEE22 pKa = 4.06KK23 pKa = 10.3RR24 pKa = 11.84RR25 pKa = 11.84KK26 pKa = 9.81RR27 pKa = 11.84STTRR31 pKa = 11.84TTRR34 pKa = 11.84TKK36 pKa = 10.31RR37 pKa = 11.84SKK39 pKa = 10.18PSHH42 pKa = 5.55LQYY45 pKa = 10.64VRR47 pKa = 11.84YY48 pKa = 9.81YY49 pKa = 8.68PGTVVPVGWDD59 pKa = 3.46GTDD62 pKa = 3.14KK63 pKa = 10.78PVTVTRR69 pKa = 11.84IPDD72 pKa = 2.97YY73 pKa = 8.46WTYY76 pKa = 11.77DD77 pKa = 3.18RR78 pKa = 11.84AVSSRR83 pKa = 11.84QSNTVVPVNTSGEE96 pKa = 4.23NPTVVAVPRR105 pKa = 11.84LLRR108 pKa = 11.84KK109 pKa = 9.98RR110 pKa = 11.84KK111 pKa = 10.05ASDD114 pKa = 2.99MM115 pKa = 4.12

Molecular weight: 13.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

24

0

24

8362

58

1112

348.4

39.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.831 ± 0.409

2.069 ± 0.397

5.071 ± 0.317

5.023 ± 0.497

5.489 ± 0.314

5.071 ± 0.508

1.686 ± 0.173

6.673 ± 0.544

5.812 ± 0.712

9.663 ± 0.53

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.452 ± 0.255

6.745 ± 0.395

5.417 ± 0.266

3.899 ± 0.31

4.52 ± 0.526

7.905 ± 0.359

6.601 ± 0.461

5.872 ± 0.492

1.136 ± 0.094

4.066 ± 0.328
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski