Capybara microvirus Cap1_SP_123

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVP2|A0A4V1FVP2_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_123 OX=2585378 PE=4 SV=1
MM1 pKa = 7.33KK2 pKa = 10.45VFEE5 pKa = 4.64GFEE8 pKa = 4.47KK9 pKa = 10.55INSFRR14 pKa = 11.84IVAIPDD20 pKa = 3.35AKK22 pKa = 10.59RR23 pKa = 11.84LFEE26 pKa = 5.0LYY28 pKa = 9.68RR29 pKa = 11.84HH30 pKa = 5.97SPNLVGNEE38 pKa = 4.09EE39 pKa = 4.06EE40 pKa = 4.65TIDD43 pKa = 4.68LALEE47 pKa = 4.21SAQRR51 pKa = 11.84PTDD54 pKa = 3.37SMALYY59 pKa = 8.67EE60 pKa = 4.11QYY62 pKa = 11.0ARR64 pKa = 11.84SMDD67 pKa = 3.75SEE69 pKa = 4.41

Molecular weight: 8.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W464|A0A4P8W464_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_123 OX=2585378 PE=4 SV=1
MM1 pKa = 7.71CISPRR6 pKa = 11.84IIPNPYY12 pKa = 10.33YY13 pKa = 10.34NDD15 pKa = 3.64KK16 pKa = 11.59GNTAWLHH23 pKa = 5.58DD24 pKa = 4.41TVCSHH29 pKa = 6.14IRR31 pKa = 11.84APCGHH36 pKa = 6.73CPEE39 pKa = 5.68CIHH42 pKa = 6.48NKK44 pKa = 8.01QNYY47 pKa = 6.13WVQRR51 pKa = 11.84CQMMEE56 pKa = 4.29FDD58 pKa = 4.91YY59 pKa = 10.81IPYY62 pKa = 9.35MVTLTYY68 pKa = 10.75NHH70 pKa = 7.31NIRR73 pKa = 11.84KK74 pKa = 8.74LHH76 pKa = 6.22IGDD79 pKa = 3.84YY80 pKa = 10.74SIMYY84 pKa = 9.9ADD86 pKa = 4.08KK87 pKa = 11.06TDD89 pKa = 3.23IQNMFKK95 pKa = 10.74RR96 pKa = 11.84MRR98 pKa = 11.84KK99 pKa = 7.78YY100 pKa = 10.82DD101 pKa = 3.34VFGRR105 pKa = 11.84EE106 pKa = 3.69FKK108 pKa = 10.98YY109 pKa = 10.39IAVSEE114 pKa = 4.33RR115 pKa = 11.84GKK117 pKa = 8.88EE118 pKa = 3.69THH120 pKa = 6.41RR121 pKa = 11.84PHH123 pKa = 5.09WHH125 pKa = 5.83ILFFLKK131 pKa = 10.52KK132 pKa = 9.92LANEE136 pKa = 4.37NEE138 pKa = 3.73WSYY141 pKa = 11.42ISHH144 pKa = 6.3EE145 pKa = 4.8KK146 pKa = 10.06EE147 pKa = 3.8LQSIFLNYY155 pKa = 6.24WTRR158 pKa = 11.84NYY160 pKa = 10.92GSTRR164 pKa = 11.84KK165 pKa = 9.24PDD167 pKa = 3.81YY168 pKa = 10.81KK169 pKa = 10.77PLLTLNKK176 pKa = 9.51RR177 pKa = 11.84RR178 pKa = 11.84TDD180 pKa = 2.92GRR182 pKa = 11.84RR183 pKa = 11.84NFDD186 pKa = 3.36LHH188 pKa = 7.77YY189 pKa = 10.59CMPGPSGNDD198 pKa = 2.86DD199 pKa = 3.4VLFYY203 pKa = 9.21CTKK206 pKa = 10.76YY207 pKa = 10.27ILKK210 pKa = 9.78HH211 pKa = 6.1DD212 pKa = 4.12PYY214 pKa = 10.97EE215 pKa = 4.7RR216 pKa = 11.84KK217 pKa = 9.48LHH219 pKa = 5.58SALMLNYY226 pKa = 9.99EE227 pKa = 3.89NDD229 pKa = 3.37EE230 pKa = 4.33AKK232 pKa = 10.75SYY234 pKa = 10.12WNTVKK239 pKa = 10.68SRR241 pKa = 11.84MLVSHH246 pKa = 6.69GFGTPYY252 pKa = 9.68TLSYY256 pKa = 10.52EE257 pKa = 4.13DD258 pKa = 4.31KK259 pKa = 10.59KK260 pKa = 11.36VKK262 pKa = 8.99KK263 pKa = 8.47TPNPSVIRR271 pKa = 11.84HH272 pKa = 4.97IRR274 pKa = 11.84KK275 pKa = 9.52GLDD278 pKa = 3.14LSTKK282 pKa = 8.62MPLYY286 pKa = 10.35INPNNGYY293 pKa = 7.86TMPLSPIYY301 pKa = 10.0KK302 pKa = 7.34PHH304 pKa = 6.57CMTRR308 pKa = 11.84EE309 pKa = 4.15DD310 pKa = 3.81YY311 pKa = 10.88QKK313 pKa = 10.78QFDD316 pKa = 4.33NNNLIDD322 pKa = 3.96INGDD326 pKa = 3.75KK327 pKa = 10.33INHH330 pKa = 6.25GSCFIDD336 pKa = 3.55TSTKK340 pKa = 10.22DD341 pKa = 3.23YY342 pKa = 11.3EE343 pKa = 4.61RR344 pKa = 11.84IIDD347 pKa = 3.88QFNHH351 pKa = 7.49RR352 pKa = 11.84ILQINKK358 pKa = 9.38HH359 pKa = 4.67YY360 pKa = 11.09

Molecular weight: 43.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1624

69

635

270.7

30.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.404 ± 1.905

1.478 ± 0.581

5.603 ± 0.577

5.172 ± 0.89

4.187 ± 1.124

4.372 ± 0.529

2.586 ± 0.948

6.897 ± 0.745

6.096 ± 1.452

7.451 ± 0.267

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.463 ± 0.36

8.067 ± 0.331

3.941 ± 0.596

4.31 ± 0.866

4.988 ± 0.526

8.682 ± 1.297

6.219 ± 1.2

4.31 ± 1.064

0.677 ± 0.296

6.096 ± 0.872
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski