Capybara microvirus Cap3_SP_433

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W633|A0A4P8W633_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_433 OX=2585451 PE=4 SV=1
MM1 pKa = 7.46AAASTAAGIGSILSGSGSMLSGSVSNGSSYY31 pKa = 10.02STSSDD36 pKa = 2.48RR37 pKa = 11.84GYY39 pKa = 11.03SDD41 pKa = 3.93SSSSSWEE48 pKa = 3.93GGSSYY53 pKa = 11.26GSADD57 pKa = 3.51SYY59 pKa = 11.83SSANSASAYY68 pKa = 9.71YY69 pKa = 10.67DD70 pKa = 3.42SAQSEE75 pKa = 4.15NWANSWTEE83 pKa = 3.36ASAANEE89 pKa = 3.92QAAKK93 pKa = 9.53SAYY96 pKa = 9.84YY97 pKa = 10.57SNQLQEE103 pKa = 3.77RR104 pKa = 11.84WYY106 pKa = 10.39KK107 pKa = 10.87EE108 pKa = 3.48QMQYY112 pKa = 11.04NAEE115 pKa = 3.97QAKK118 pKa = 6.4TQRR121 pKa = 11.84EE122 pKa = 4.28YY123 pKa = 11.22EE124 pKa = 3.86EE125 pKa = 5.49RR126 pKa = 11.84MANTAYY132 pKa = 10.0QRR134 pKa = 11.84AVADD138 pKa = 4.63LKK140 pKa = 11.3AAGLNPILAAMLGGSATPAASAASVMAPSTSKK172 pKa = 11.31AEE174 pKa = 4.18TYY176 pKa = 9.7MNSGSSAYY184 pKa = 10.17GYY186 pKa = 9.86GKK188 pKa = 10.4SYY190 pKa = 11.42GEE192 pKa = 4.19GWSNSNQYY200 pKa = 10.44SEE202 pKa = 4.52SHH204 pKa = 6.16EE205 pKa = 4.23KK206 pKa = 10.62SGSSWGGGSQSTSHH220 pKa = 6.04SQNDD224 pKa = 3.53AKK226 pKa = 10.9SVSRR230 pKa = 11.84SSSTASSNLVNGLSAIGAGIKK251 pKa = 8.82EE252 pKa = 4.01LWYY255 pKa = 10.69KK256 pKa = 10.94GEE258 pKa = 3.97EE259 pKa = 4.02RR260 pKa = 4.48

Molecular weight: 27.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4Z4|A0A4P8W4Z4_9VIRU Major capsid protein OS=Capybara microvirus Cap3_SP_433 OX=2585451 PE=3 SV=1
MM1 pKa = 7.34SCYY4 pKa = 9.61HH5 pKa = 6.55PKK7 pKa = 10.22IIIITEE13 pKa = 3.81EE14 pKa = 3.63AKK16 pKa = 10.79LNKK19 pKa = 9.6NGKK22 pKa = 9.2IGSLVKK28 pKa = 10.29FVEE31 pKa = 5.01DD32 pKa = 3.51EE33 pKa = 4.39KK34 pKa = 11.64AWGGYY39 pKa = 7.47EE40 pKa = 4.36NIEE43 pKa = 4.19KK44 pKa = 10.48FNAKK48 pKa = 10.26AEE50 pKa = 4.22EE51 pKa = 3.91QRR53 pKa = 11.84KK54 pKa = 9.86KK55 pKa = 11.02YY56 pKa = 10.31GLKK59 pKa = 8.81KK60 pKa = 9.07TYY62 pKa = 9.79ATMAPCGKK70 pKa = 10.01CQGCRR75 pKa = 11.84FKK77 pKa = 10.84QSKK80 pKa = 8.2EE81 pKa = 3.41WAVRR85 pKa = 11.84IEE87 pKa = 4.48KK88 pKa = 9.66EE89 pKa = 3.8AKK91 pKa = 9.31QYY93 pKa = 8.79KK94 pKa = 9.55HH95 pKa = 6.47NYY97 pKa = 8.74FVTLTYY103 pKa = 10.83NDD105 pKa = 3.43EE106 pKa = 4.12NLPIKK111 pKa = 10.31EE112 pKa = 4.9GYY114 pKa = 9.12PEE116 pKa = 4.36SKK118 pKa = 9.36GTLKK122 pKa = 10.64KK123 pKa = 10.24EE124 pKa = 3.67HH125 pKa = 7.01TIQFMKK131 pKa = 10.52SIRR134 pKa = 11.84QSIKK138 pKa = 9.1RR139 pKa = 11.84HH140 pKa = 5.08YY141 pKa = 9.37NHH143 pKa = 7.49DD144 pKa = 3.98GIKK147 pKa = 10.24FYY149 pKa = 11.32LCGEE153 pKa = 4.25YY154 pKa = 10.47GSKK157 pKa = 10.83GEE159 pKa = 4.11RR160 pKa = 11.84PHH162 pKa = 6.65YY163 pKa = 9.65HH164 pKa = 7.24IIMMNMPEE172 pKa = 4.15LEE174 pKa = 4.13KK175 pKa = 11.27NKK177 pKa = 10.45LVGQNTKK184 pKa = 9.61TKK186 pKa = 10.8DD187 pKa = 3.27PYY189 pKa = 9.69FTNDD193 pKa = 3.67LFDD196 pKa = 4.22SAWSKK201 pKa = 11.22GFVIIGKK208 pKa = 7.96VNWNTISYY216 pKa = 8.94VAGYY220 pKa = 8.07CQKK223 pKa = 11.14KK224 pKa = 10.28LFGEE228 pKa = 4.3VGKK231 pKa = 10.62KK232 pKa = 9.15IYY234 pKa = 9.81EE235 pKa = 4.2MKK237 pKa = 10.39GQEE240 pKa = 4.2PIYY243 pKa = 10.27ATMSRR248 pKa = 11.84NPGIGRR254 pKa = 11.84NYY256 pKa = 9.86YY257 pKa = 9.88EE258 pKa = 4.36EE259 pKa = 4.21NKK261 pKa = 8.35EE262 pKa = 3.96TIYY265 pKa = 10.69RR266 pKa = 11.84YY267 pKa = 10.74DD268 pKa = 3.38EE269 pKa = 4.56VITSKK274 pKa = 10.76GKK276 pKa = 9.06SVKK279 pKa = 9.79PPSYY283 pKa = 10.24FDD285 pKa = 3.53RR286 pKa = 11.84LMDD289 pKa = 3.91IGEE292 pKa = 4.31EE293 pKa = 3.81DD294 pKa = 4.12SIILKK299 pKa = 8.94EE300 pKa = 4.09LKK302 pKa = 9.73EE303 pKa = 3.92KK304 pKa = 10.69RR305 pKa = 11.84RR306 pKa = 11.84EE307 pKa = 3.92KK308 pKa = 11.06SNNALKK314 pKa = 10.36QKK316 pKa = 10.09YY317 pKa = 9.17AQTTLTIKK325 pKa = 10.3EE326 pKa = 3.86QLALEE331 pKa = 4.24EE332 pKa = 4.05RR333 pKa = 11.84TAVEE337 pKa = 4.21KK338 pKa = 10.73LKK340 pKa = 10.68KK341 pKa = 9.98YY342 pKa = 10.26NRR344 pKa = 11.84DD345 pKa = 3.55RR346 pKa = 11.84IGQQ349 pKa = 3.55

Molecular weight: 40.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1520

86

549

253.3

28.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.632 ± 1.727

0.855 ± 0.283

4.145 ± 0.646

8.947 ± 1.39

3.421 ± 0.954

6.645 ± 0.796

1.645 ± 0.384

6.579 ± 1.116

7.895 ± 2.042

5.329 ± 0.368

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.895 ± 0.355

5.658 ± 0.331

3.684 ± 0.795

4.276 ± 0.408

4.013 ± 0.324

8.289 ± 3.476

6.513 ± 0.993

3.355 ± 0.604

1.974 ± 0.344

6.25 ± 0.278
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski