Lujinxingia litoralis

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Bradymonadales; Bradymonadaceae; Lujinxingia

Average proteome isoelectric point is 5.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3776 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A328CBD2|A0A328CBD2_9DELT Uncharacterized protein OS=Lujinxingia litoralis OX=2211119 GN=DL240_09360 PE=4 SV=1
MM1 pKa = 7.56ALSACGGDD9 pKa = 3.88PEE11 pKa = 4.97PDD13 pKa = 3.25RR14 pKa = 11.84NPDD17 pKa = 2.86VGQDD21 pKa = 3.4VDD23 pKa = 4.34PDD25 pKa = 3.95PDD27 pKa = 5.43AGDD30 pKa = 3.63TDD32 pKa = 3.89VDD34 pKa = 3.69PDD36 pKa = 4.25ADD38 pKa = 3.83VDD40 pKa = 3.89PDD42 pKa = 4.15ADD44 pKa = 3.71VDD46 pKa = 3.98PDD48 pKa = 3.76TDD50 pKa = 3.97VDD52 pKa = 3.6ITDD55 pKa = 4.11PPEE58 pKa = 3.95DD59 pKa = 5.42AIACDD64 pKa = 4.08EE65 pKa = 4.82PMPQPPQGEE74 pKa = 4.3RR75 pKa = 11.84CVVIPGNGDD84 pKa = 3.68HH85 pKa = 6.95ILFRR89 pKa = 11.84GTLLAGDD96 pKa = 4.3DD97 pKa = 4.25VYY99 pKa = 11.45HH100 pKa = 6.81EE101 pKa = 5.02GSLLLNDD108 pKa = 3.78QSPNRR113 pKa = 11.84QIVCSGCGCADD124 pKa = 3.42TPEE127 pKa = 4.56AQDD130 pKa = 3.57ATIVSCPSGVISPGLINPHH149 pKa = 5.7DD150 pKa = 5.38HH151 pKa = 5.8ITYY154 pKa = 10.02SLSHH158 pKa = 6.54PRR160 pKa = 11.84PHH162 pKa = 7.58GEE164 pKa = 3.44EE165 pKa = 4.32RR166 pKa = 11.84FDD168 pKa = 4.93HH169 pKa = 5.93RR170 pKa = 11.84HH171 pKa = 4.86DD172 pKa = 3.04WRR174 pKa = 11.84RR175 pKa = 11.84GLRR178 pKa = 11.84GHH180 pKa = 6.48DD181 pKa = 4.25QINTSPGSDD190 pKa = 3.19NSHH193 pKa = 6.26EE194 pKa = 4.67GILYY198 pKa = 10.71GEE200 pKa = 4.29LRR202 pKa = 11.84MLFGGATSVVGSVGSGDD219 pKa = 3.37ASGMLRR225 pKa = 11.84NLDD228 pKa = 3.4NTSYY232 pKa = 11.02TEE234 pKa = 4.05GLSGVDD240 pKa = 2.75VSYY243 pKa = 9.28RR244 pKa = 11.84TFPLGDD250 pKa = 3.47SNGTLRR256 pKa = 11.84ASGCDD261 pKa = 3.45YY262 pKa = 11.26PNIDD266 pKa = 3.51NEE268 pKa = 4.23SRR270 pKa = 11.84LNSGVYY276 pKa = 9.92LPHH279 pKa = 8.02LSEE282 pKa = 6.05GIDD285 pKa = 3.23PEE287 pKa = 4.45ANNEE291 pKa = 3.91FHH293 pKa = 6.87CASGASGSDD302 pKa = 3.92LIQDD306 pKa = 3.61NTSIIHH312 pKa = 6.9GIGLSTRR319 pKa = 11.84DD320 pKa = 3.25IALMARR326 pKa = 11.84RR327 pKa = 11.84GATLVWSARR336 pKa = 11.84TNIDD340 pKa = 3.45LYY342 pKa = 11.39GNTAQAPIFKK352 pKa = 10.38RR353 pKa = 11.84FGVPIALGTDD363 pKa = 3.55WSASGSMNMLRR374 pKa = 11.84EE375 pKa = 4.21LQCADD380 pKa = 3.42YY381 pKa = 11.18LNRR384 pKa = 11.84LYY386 pKa = 10.99YY387 pKa = 10.64DD388 pKa = 3.3EE389 pKa = 5.29TFTEE393 pKa = 4.15QEE395 pKa = 3.9LWMMATANAADD406 pKa = 3.63AMGAGDD412 pKa = 3.52QIGRR416 pKa = 11.84LEE418 pKa = 4.11EE419 pKa = 5.08GYY421 pKa = 11.14VGDD424 pKa = 3.48ITIFDD429 pKa = 3.77GTDD432 pKa = 2.97RR433 pKa = 11.84LPYY436 pKa = 9.9RR437 pKa = 11.84AIIDD441 pKa = 3.9AEE443 pKa = 3.92IADD446 pKa = 3.72IVLVLRR452 pKa = 11.84GGEE455 pKa = 4.14PLYY458 pKa = 11.38GDD460 pKa = 3.72AQLIEE465 pKa = 4.47ALVDD469 pKa = 3.62SAEE472 pKa = 4.61LDD474 pKa = 3.45GCEE477 pKa = 4.66QIDD480 pKa = 3.58VCEE483 pKa = 4.16RR484 pKa = 11.84GRR486 pKa = 11.84RR487 pKa = 11.84LCVEE491 pKa = 4.28LDD493 pKa = 3.18AGKK496 pKa = 10.13SLSAIRR502 pKa = 11.84SAVSSNAYY510 pKa = 9.65EE511 pKa = 4.44LFFCGEE517 pKa = 4.1PDD519 pKa = 4.97DD520 pKa = 5.52EE521 pKa = 4.7PSCMPFRR528 pKa = 11.84PNEE531 pKa = 4.0YY532 pKa = 10.41SGLTDD537 pKa = 3.34NTDD540 pKa = 2.99NSGDD544 pKa = 4.16GIPDD548 pKa = 3.51AVDD551 pKa = 3.02NCPAYY556 pKa = 10.42FNPIRR561 pKa = 11.84PMDD564 pKa = 4.33GGQQPDD570 pKa = 3.61TNGNGIGDD578 pKa = 3.74ICDD581 pKa = 3.91PCPLSEE587 pKa = 5.77DD588 pKa = 4.32PNCNTIDD595 pKa = 4.49PDD597 pKa = 4.22DD598 pKa = 5.08LDD600 pKa = 5.86GDD602 pKa = 4.38GVANDD607 pKa = 3.83TDD609 pKa = 3.53NCPVHH614 pKa = 6.71FNPGQEE620 pKa = 4.13NTSGDD625 pKa = 3.99AYY627 pKa = 10.89GDD629 pKa = 3.59ACSPCPEE636 pKa = 4.18TFLGEE641 pKa = 4.5GEE643 pKa = 4.32ACPVSIYY650 pKa = 10.32SIKK653 pKa = 11.01NGTTDD658 pKa = 3.72PGSLGTFEE666 pKa = 4.79GVIVTAVAEE675 pKa = 4.43GEE677 pKa = 4.55GFFVQVDD684 pKa = 4.06PQSDD688 pKa = 4.12DD689 pKa = 3.62YY690 pKa = 11.9QGDD693 pKa = 3.95QYY695 pKa = 11.86SGIYY699 pKa = 9.32VYY701 pKa = 11.07NRR703 pKa = 11.84GGTVFPQVGDD713 pKa = 4.15RR714 pKa = 11.84IDD716 pKa = 3.59LTGSSTLFYY725 pKa = 11.08GQFQVGNVSAINILEE740 pKa = 4.14SGYY743 pKa = 9.54PLPAPTVVSPAEE755 pKa = 3.99VANNGALRR763 pKa = 11.84QAYY766 pKa = 9.16EE767 pKa = 4.18GVLVRR772 pKa = 11.84VEE774 pKa = 4.65DD775 pKa = 3.61VTVTNNSPDD784 pKa = 3.9PGPGQGDD791 pKa = 3.64NPFEE795 pKa = 4.1FAVDD799 pKa = 3.01SGLRR803 pKa = 11.84INNLMYY809 pKa = 10.52TIDD812 pKa = 4.21PKK814 pKa = 11.26PEE816 pKa = 3.87VGNSFASITGVLRR829 pKa = 11.84WANEE833 pKa = 3.73NSKK836 pKa = 10.37VEE838 pKa = 4.11PRR840 pKa = 11.84SEE842 pKa = 4.33LDD844 pKa = 3.62VVSGPPFLAAASPEE858 pKa = 3.96ALFIDD863 pKa = 4.4ADD865 pKa = 4.01GADD868 pKa = 3.93GQLTLSLNRR877 pKa = 11.84ASQGEE882 pKa = 4.43STLALSYY889 pKa = 10.83NPAGIISGPTSATLADD905 pKa = 4.34GEE907 pKa = 4.39QSVTVAIAATTPDD920 pKa = 3.49AEE922 pKa = 4.36ATISVTLDD930 pKa = 3.01GVTLTIPVTTYY941 pKa = 10.25SAASPRR947 pKa = 11.84EE948 pKa = 3.99LSSLSASADD957 pKa = 3.7TIFVGDD963 pKa = 3.62QVNFDD968 pKa = 4.59LEE970 pKa = 4.62LNLPAGAAGEE980 pKa = 4.42TVSLNLLPVEE990 pKa = 4.38TTLPFPAEE998 pKa = 3.84VSFAAGEE1005 pKa = 3.86QRR1007 pKa = 11.84ANITLTFNEE1016 pKa = 4.58GAGDD1020 pKa = 3.81YY1021 pKa = 9.95TLEE1024 pKa = 4.31ATLGTTTLSADD1035 pKa = 3.52VTVANAPDD1043 pKa = 3.65EE1044 pKa = 4.11QSEE1047 pKa = 4.61SFINFDD1053 pKa = 4.44GPGNTYY1059 pKa = 10.61GAGSFVGDD1067 pKa = 3.05SGYY1070 pKa = 9.27TFNYY1074 pKa = 8.0TGGRR1078 pKa = 11.84LVDD1081 pKa = 3.49EE1082 pKa = 5.11TSNSDD1087 pKa = 3.27YY1088 pKa = 11.05TIDD1091 pKa = 4.12GRR1093 pKa = 11.84GLMFGGSGDD1102 pKa = 3.26KK1103 pKa = 10.92SLIVQGLEE1111 pKa = 3.74GGINSLRR1118 pKa = 11.84LEE1120 pKa = 3.86MRR1122 pKa = 11.84KK1123 pKa = 9.9AFTSGANRR1131 pKa = 11.84QIEE1134 pKa = 4.46VFVNGTSVGTSEE1146 pKa = 4.55VFGNASGADD1155 pKa = 3.59ATVHH1159 pKa = 6.16EE1160 pKa = 5.19LLLEE1164 pKa = 5.0DD1165 pKa = 4.25INISGTFDD1173 pKa = 3.57LEE1175 pKa = 3.81IRR1177 pKa = 11.84SIQSGQVTIDD1187 pKa = 3.36NLVWGSFLPP1196 pKa = 4.17

Molecular weight: 126.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A328C748|A0A328C748_9DELT Peptidase_M23 domain-containing protein OS=Lujinxingia litoralis OX=2211119 GN=DL240_09425 PE=4 SV=1
MM1 pKa = 7.74RR2 pKa = 11.84SGRR5 pKa = 11.84RR6 pKa = 11.84VRR8 pKa = 11.84GRR10 pKa = 11.84GRR12 pKa = 11.84GRR14 pKa = 11.84ARR16 pKa = 11.84VRR18 pKa = 11.84GRR20 pKa = 11.84VRR22 pKa = 11.84GRR24 pKa = 11.84GRR26 pKa = 11.84GRR28 pKa = 11.84GRR30 pKa = 11.84VRR32 pKa = 11.84ARR34 pKa = 11.84ARR36 pKa = 11.84ARR38 pKa = 11.84ARR40 pKa = 11.84GRR42 pKa = 11.84VRR44 pKa = 11.84VRR46 pKa = 11.84GRR48 pKa = 11.84GRR50 pKa = 11.84GRR52 pKa = 11.84GRR54 pKa = 11.84GRR56 pKa = 11.84GRR58 pKa = 11.84GRR60 pKa = 11.84VRR62 pKa = 11.84GRR64 pKa = 11.84VRR66 pKa = 11.84ARR68 pKa = 11.84RR69 pKa = 11.84KK70 pKa = 7.79TPHH73 pKa = 6.15LQRR76 pKa = 11.84LPGVGCFF83 pKa = 3.82

Molecular weight: 9.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3776

0

3776

1447238

37

4109

383.3

41.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.323 ± 0.058

1.131 ± 0.034

5.85 ± 0.038

7.575 ± 0.049

3.445 ± 0.024

8.221 ± 0.043

2.303 ± 0.021

4.119 ± 0.029

2.24 ± 0.026

10.653 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.111 ± 0.017

2.377 ± 0.025

5.441 ± 0.037

3.746 ± 0.025

7.703 ± 0.047

5.71 ± 0.029

5.047 ± 0.034

7.343 ± 0.038

1.313 ± 0.017

2.348 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski