Torque teno mini virus 2

Taxonomy: Viruses; Anelloviridae; Betatorquevirus

Average proteome isoelectric point is 7.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9JG54|Q9JG54_9VIRU Uncharacterized protein OS=Torque teno mini virus 2 OX=687370 PE=4 SV=1
MM1 pKa = 7.22SLWKK5 pKa = 7.89PTKK8 pKa = 10.01YY9 pKa = 10.42GPKK12 pKa = 9.76RR13 pKa = 11.84LEE15 pKa = 4.0LQWLNGCITSHH26 pKa = 7.63DD27 pKa = 4.63YY28 pKa = 10.88ICGCDD33 pKa = 3.66DD34 pKa = 3.83PAKK37 pKa = 10.52HH38 pKa = 5.62FLKK41 pKa = 10.98VLVEE45 pKa = 4.48KK46 pKa = 10.91SGFDD50 pKa = 3.54QKK52 pKa = 11.4CLTFGDD58 pKa = 4.27DD59 pKa = 3.99PGTGAATTTDD69 pKa = 5.02DD70 pKa = 4.3IGIDD74 pKa = 3.57QGDD77 pKa = 4.22LEE79 pKa = 4.87LLFAEE84 pKa = 4.93EE85 pKa = 4.75DD86 pKa = 3.51ADD88 pKa = 4.03GG89 pKa = 4.18

Molecular weight: 9.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9JG53|Q9JG53_9VIRU Capsid protein OS=Torque teno mini virus 2 OX=687370 PE=3 SV=1
MM1 pKa = 7.21QCTLFISSSEE11 pKa = 4.16DD12 pKa = 3.16ALLQCKK18 pKa = 7.36TLKK21 pKa = 10.08TPANNPNSPCPVTSYY36 pKa = 10.82KK37 pKa = 10.22QYY39 pKa = 11.2KK40 pKa = 10.17SLIQQQTNNQCSTTLTNEE58 pKa = 4.75DD59 pKa = 2.52IHH61 pKa = 6.69LQKK64 pKa = 10.51QLRR67 pKa = 11.84KK68 pKa = 8.68EE69 pKa = 4.1LKK71 pKa = 8.72RR72 pKa = 11.84LKK74 pKa = 9.03TVKK77 pKa = 9.98HH78 pKa = 6.51LYY80 pKa = 9.51SQISSTHH87 pKa = 4.35EE88 pKa = 4.23SKK90 pKa = 10.8RR91 pKa = 11.84KK92 pKa = 7.22RR93 pKa = 11.84HH94 pKa = 5.08RR95 pKa = 11.84RR96 pKa = 11.84TRR98 pKa = 11.84ARR100 pKa = 11.84KK101 pKa = 9.63KK102 pKa = 7.99PTHH105 pKa = 6.54HH106 pKa = 6.33KK107 pKa = 8.88TSPSSSSTSDD117 pKa = 3.29EE118 pKa = 4.3GDD120 pKa = 3.45SSSSEE125 pKa = 4.05SSNN128 pKa = 3.21

Molecular weight: 14.55 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

845

89

628

281.7

32.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.195 ± 0.551

2.012 ± 0.866

5.799 ± 1.746

3.905 ± 0.602

4.379 ± 1.329

4.615 ± 1.678

3.077 ± 0.55

5.917 ± 1.224

8.047 ± 1.059

8.047 ± 0.887

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.302 ± 0.215

5.089 ± 0.928

7.337 ± 1.422

5.562 ± 0.793

6.154 ± 1.224

7.219 ± 3.723

8.639 ± 0.798

2.367 ± 0.313

2.604 ± 1.008

4.734 ± 1.268
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski