Sulfurovum sp. AR

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Sulfurovaceae; Sulfurovum; unclassified Sulfurovum

Average proteome isoelectric point is 6.22

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2114 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I2K6X7|I2K6X7_9PROT Uncharacterized protein OS=Sulfurovum sp. AR OX=1165841 GN=SULAR_06408 PE=4 SV=1
MM1 pKa = 7.47KK2 pKa = 10.29LIKK5 pKa = 10.5LIMILGALLLTNLSAAVISGYY26 pKa = 10.31CFEE29 pKa = 5.39DD30 pKa = 3.69VNGDD34 pKa = 3.92GIKK37 pKa = 10.82DD38 pKa = 3.5PGEE41 pKa = 4.02ICAEE45 pKa = 3.88EE46 pKa = 4.19AVWAKK51 pKa = 10.09IVNLSTGHH59 pKa = 6.18VEE61 pKa = 4.01VSKK64 pKa = 10.88NLYY67 pKa = 10.62SIDD70 pKa = 4.41PEE72 pKa = 4.08TSGYY76 pKa = 10.92FEE78 pKa = 5.87FNTHH82 pKa = 5.68SKK84 pKa = 8.81TGQFKK89 pKa = 11.05VFLDD93 pKa = 3.73NNADD97 pKa = 3.73GKK99 pKa = 9.96DD100 pKa = 3.66TVATPPVNTHH110 pKa = 5.58FTVDD114 pKa = 3.68PLGDD118 pKa = 3.63GTDD121 pKa = 3.56TNRR124 pKa = 11.84TNGEE128 pKa = 3.93TYY130 pKa = 8.89YY131 pKa = 10.69TIDD134 pKa = 3.99PGEE137 pKa = 4.25EE138 pKa = 3.56DD139 pKa = 3.96TIYY142 pKa = 10.77EE143 pKa = 4.06NQDD146 pKa = 2.67FGFQFGGDD154 pKa = 4.22CVCEE158 pKa = 4.1GADD161 pKa = 4.3GIIIKK166 pKa = 8.78KK167 pKa = 8.16TININGDD174 pKa = 3.1VSDD177 pKa = 4.25WEE179 pKa = 4.6SVHH182 pKa = 6.73TDD184 pKa = 2.9ADD186 pKa = 4.04NNVCDD191 pKa = 5.06HH192 pKa = 7.03GDD194 pKa = 3.86SEE196 pKa = 5.02DD197 pKa = 3.61KK198 pKa = 11.06DD199 pKa = 5.41AIVQSTGRR207 pKa = 11.84NLVQFTWTGDD217 pKa = 2.91NDD219 pKa = 3.32FAYY222 pKa = 10.36GFTRR226 pKa = 11.84RR227 pKa = 11.84VGSSTNTQTFIYY239 pKa = 10.12YY240 pKa = 10.33ADD242 pKa = 4.1RR243 pKa = 11.84DD244 pKa = 3.48GDD246 pKa = 3.55GRR248 pKa = 11.84MEE250 pKa = 4.81AEE252 pKa = 4.71DD253 pKa = 3.82FALVAGWQGNTGATSLYY270 pKa = 9.51YY271 pKa = 10.45YY272 pKa = 9.88PYY274 pKa = 10.89LPADD278 pKa = 4.25LVNGDD283 pKa = 3.9SMVWTQADD291 pKa = 3.06IDD293 pKa = 4.09AGKK296 pKa = 10.05LPPGGQTPDD305 pKa = 3.43TSWIGSGDD313 pKa = 3.92GYY315 pKa = 9.73TLAGNLDD322 pKa = 3.68TGSGVDD328 pKa = 5.88LIAAGNGLAQGVTEE342 pKa = 4.55ASGGLDD348 pKa = 3.34DD349 pKa = 6.31AGVTMEE355 pKa = 4.37WRR357 pKa = 11.84VRR359 pKa = 11.84WDD361 pKa = 4.02AIGLTPFQGITYY373 pKa = 9.46HH374 pKa = 6.5ISTMNSSVNDD384 pKa = 3.79NNPPGQVDD392 pKa = 4.23DD393 pKa = 5.24NMAGCYY399 pKa = 10.36GEE401 pKa = 4.12ATLRR405 pKa = 11.84YY406 pKa = 9.38CGVTLVPDD414 pKa = 3.99RR415 pKa = 11.84SIILPSGSVGPVYY428 pKa = 10.59FEE430 pKa = 5.51HH431 pKa = 7.24NLTNTGNGDD440 pKa = 3.6EE441 pKa = 4.66NLTLSLTQTEE451 pKa = 4.31SDD453 pKa = 3.66FTVTYY458 pKa = 10.23IEE460 pKa = 4.89YY461 pKa = 11.08YY462 pKa = 10.88NDD464 pKa = 3.51ANGNGVEE471 pKa = 5.02DD472 pKa = 4.09LGEE475 pKa = 4.26EE476 pKa = 4.22NLTGGPLALGAGEE489 pKa = 4.84SINLLVKK496 pKa = 10.55IGLPTGLDD504 pKa = 3.54DD505 pKa = 6.02NIATGEE511 pKa = 4.12INATTTSCAVNKK523 pKa = 10.43SAVVYY528 pKa = 9.82DD529 pKa = 4.11QIRR532 pKa = 11.84VLPLNFDD539 pKa = 3.89LDD541 pKa = 3.64ITKK544 pKa = 10.3EE545 pKa = 4.08VSDD548 pKa = 5.72DD549 pKa = 3.45NASWVDD555 pKa = 3.83TIEE558 pKa = 4.29LSEE561 pKa = 4.51GSPAYY566 pKa = 10.7YY567 pKa = 10.44RR568 pKa = 11.84ITVTNNGPDD577 pKa = 3.32GATDD581 pKa = 3.36VTVNDD586 pKa = 3.7VLPANVNYY594 pKa = 9.86IGYY597 pKa = 9.28YY598 pKa = 8.26ATQGTYY604 pKa = 10.78GAGQWMVGNLALDD617 pKa = 4.42GSAEE621 pKa = 4.01LFIDD625 pKa = 3.85VNVSQTAGDD634 pKa = 3.58LTVIQNIASTTDD646 pKa = 3.19TNDD649 pKa = 3.05TDD651 pKa = 5.16TNDD654 pKa = 3.43QDD656 pKa = 4.34DD657 pKa = 4.36ANITAIHH664 pKa = 6.26IPVVNLQIVKK674 pKa = 8.8TVSNPTPYY682 pKa = 10.31EE683 pKa = 4.25GEE685 pKa = 4.51DD686 pKa = 3.05INYY689 pKa = 7.68TITVTKK695 pKa = 10.49FGIDD699 pKa = 3.31DD700 pKa = 4.01AEE702 pKa = 3.99NVVVNDD708 pKa = 4.34ILPPWVSYY716 pKa = 11.18VDD718 pKa = 3.59STASVGSYY726 pKa = 11.14DD727 pKa = 3.92EE728 pKa = 4.44TTGIWDD734 pKa = 3.77IGTMSNSVEE743 pKa = 4.08TLIIQATVDD752 pKa = 3.61TNATLHH758 pKa = 5.79NPIVNTASVSTDD770 pKa = 3.17TTDD773 pKa = 3.16TNPDD777 pKa = 3.59DD778 pKa = 6.13DD779 pKa = 4.07IASATFNASNPADD792 pKa = 3.86LGITKK797 pKa = 9.07TVDD800 pKa = 3.12NPNPQEE806 pKa = 4.08GDD808 pKa = 3.67TIVYY812 pKa = 7.58TISVTNYY819 pKa = 9.91GPLDD823 pKa = 3.44ATNIYY828 pKa = 9.02VQEE831 pKa = 4.16EE832 pKa = 4.43PFDD835 pKa = 4.44GNLSITGTDD844 pKa = 3.22TTLGTFNAPWWHH856 pKa = 5.91IPEE859 pKa = 4.96LNVSQTAVLTVTAMVDD875 pKa = 3.63LNSTGDD881 pKa = 3.47ILINNVIIDD890 pKa = 4.09TEE892 pKa = 4.11RR893 pKa = 11.84LDD895 pKa = 4.22QNDD898 pKa = 3.99TNGEE902 pKa = 3.93NDD904 pKa = 3.27KK905 pKa = 10.18ATAIVIVGCPCDD917 pKa = 4.58NISSDD922 pKa = 4.11SASAMNKK929 pKa = 8.49TVGLLMICMTLLIGLIFVRR948 pKa = 11.84RR949 pKa = 11.84EE950 pKa = 3.34EE951 pKa = 4.06KK952 pKa = 10.45YY953 pKa = 10.82NRR955 pKa = 11.84NEE957 pKa = 3.7RR958 pKa = 3.68

Molecular weight: 102.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I2K7J7|I2K7J7_9PROT ATP synthase subunit a OS=Sulfurovum sp. AR OX=1165841 GN=atpB PE=3 SV=1
MM1 pKa = 7.28KK2 pKa = 9.38RR3 pKa = 11.84TYY5 pKa = 9.96QPHH8 pKa = 4.86STPRR12 pKa = 11.84KK13 pKa = 7.0RR14 pKa = 11.84THH16 pKa = 6.38GFRR19 pKa = 11.84TRR21 pKa = 11.84MKK23 pKa = 8.87TKK25 pKa = 10.11NGRR28 pKa = 11.84KK29 pKa = 9.33VISARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.87GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2114

0

2114

643284

29

2708

304.3

34.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.284 ± 0.065

0.872 ± 0.018

5.736 ± 0.048

7.278 ± 0.06

4.686 ± 0.038

6.454 ± 0.055

2.192 ± 0.027

7.859 ± 0.049

7.619 ± 0.064

9.77 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.89 ± 0.027

4.356 ± 0.043

3.348 ± 0.031

3.093 ± 0.029

3.627 ± 0.036

6.102 ± 0.036

5.528 ± 0.045

6.503 ± 0.048

0.879 ± 0.02

3.925 ± 0.041
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski