Snake deltavirus F18-5

Taxonomy: Viruses; Ribozyviria; Kolmioviridae; Deltavirus; unclassified Deltavirus

Average proteome isoelectric point is 8.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G1TVA1|A0A3G1TVA1_9VIRU Delta antigen OS=Snake deltavirus F18-5 OX=2419666 PE=3 SV=1
MM1 pKa = 7.07EE2 pKa = 4.94TPSKK6 pKa = 10.54KK7 pKa = 10.14QIPTPSRR14 pKa = 11.84EE15 pKa = 4.52DD16 pKa = 3.29ILEE19 pKa = 3.91QWVEE23 pKa = 3.47LGKK26 pKa = 10.53RR27 pKa = 11.84KK28 pKa = 9.99KK29 pKa = 9.97EE30 pKa = 4.08LEE32 pKa = 4.09KK33 pKa = 10.69EE34 pKa = 4.19LQKK37 pKa = 9.68VTKK40 pKa = 9.91KK41 pKa = 10.19KK42 pKa = 10.44RR43 pKa = 11.84KK44 pKa = 9.79LEE46 pKa = 4.11EE47 pKa = 3.55QHH49 pKa = 6.62GFLGNVLGIVRR60 pKa = 11.84GKK62 pKa = 7.21EE63 pKa = 3.75QKK65 pKa = 9.97PAATPQKK72 pKa = 9.95KK73 pKa = 9.59RR74 pKa = 11.84KK75 pKa = 9.47AEE77 pKa = 3.74EE78 pKa = 4.07SMDD81 pKa = 3.41VDD83 pKa = 3.76GGSRR87 pKa = 11.84LPPKK91 pKa = 9.7EE92 pKa = 3.42IKK94 pKa = 10.15KK95 pKa = 10.5RR96 pKa = 11.84IFTEE100 pKa = 3.99EE101 pKa = 3.15EE102 pKa = 3.72RR103 pKa = 11.84AEE105 pKa = 3.98HH106 pKa = 6.53RR107 pKa = 11.84RR108 pKa = 11.84RR109 pKa = 11.84GQLEE113 pKa = 4.04NKK115 pKa = 9.36KK116 pKa = 10.12KK117 pKa = 9.88QLEE120 pKa = 4.33GRR122 pKa = 11.84GKK124 pKa = 9.61QLPEE128 pKa = 4.05EE129 pKa = 4.2EE130 pKa = 4.17QKK132 pKa = 11.29LLAEE136 pKa = 4.7LTRR139 pKa = 11.84KK140 pKa = 10.4DD141 pKa = 3.54EE142 pKa = 3.94EE143 pKa = 4.08RR144 pKa = 11.84KK145 pKa = 9.71QRR147 pKa = 11.84FHH149 pKa = 7.58YY150 pKa = 10.47GGAGEE155 pKa = 4.2VNPLEE160 pKa = 4.53GQSRR164 pKa = 11.84GAFGGGFVPSTQGVPEE180 pKa = 4.45SPFHH184 pKa = 5.77RR185 pKa = 11.84TGTGLDD191 pKa = 3.36VRR193 pKa = 11.84GDD195 pKa = 3.28KK196 pKa = 9.93MFPP199 pKa = 3.24

Molecular weight: 22.73 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3G1TVA1|A0A3G1TVA1_9VIRU Delta antigen OS=Snake deltavirus F18-5 OX=2419666 PE=3 SV=1
MM1 pKa = 7.07EE2 pKa = 4.94TPSKK6 pKa = 10.54KK7 pKa = 10.14QIPTPSRR14 pKa = 11.84EE15 pKa = 4.52DD16 pKa = 3.29ILEE19 pKa = 3.91QWVEE23 pKa = 3.47LGKK26 pKa = 10.53RR27 pKa = 11.84KK28 pKa = 9.99KK29 pKa = 9.97EE30 pKa = 4.08LEE32 pKa = 4.09KK33 pKa = 10.69EE34 pKa = 4.19LQKK37 pKa = 9.68VTKK40 pKa = 9.91KK41 pKa = 10.19KK42 pKa = 10.44RR43 pKa = 11.84KK44 pKa = 9.79LEE46 pKa = 4.11EE47 pKa = 3.55QHH49 pKa = 6.62GFLGNVLGIVRR60 pKa = 11.84GKK62 pKa = 7.21EE63 pKa = 3.75QKK65 pKa = 9.97PAATPQKK72 pKa = 9.95KK73 pKa = 9.59RR74 pKa = 11.84KK75 pKa = 9.47AEE77 pKa = 3.74EE78 pKa = 4.07SMDD81 pKa = 3.41VDD83 pKa = 3.76GGSRR87 pKa = 11.84LPPKK91 pKa = 9.7EE92 pKa = 3.42IKK94 pKa = 10.15KK95 pKa = 10.5RR96 pKa = 11.84IFTEE100 pKa = 3.99EE101 pKa = 3.15EE102 pKa = 3.72RR103 pKa = 11.84AEE105 pKa = 3.98HH106 pKa = 6.53RR107 pKa = 11.84RR108 pKa = 11.84RR109 pKa = 11.84GQLEE113 pKa = 4.04NKK115 pKa = 9.36KK116 pKa = 10.12KK117 pKa = 9.88QLEE120 pKa = 4.33GRR122 pKa = 11.84GKK124 pKa = 9.61QLPEE128 pKa = 4.05EE129 pKa = 4.2EE130 pKa = 4.17QKK132 pKa = 11.29LLAEE136 pKa = 4.7LTRR139 pKa = 11.84KK140 pKa = 10.4DD141 pKa = 3.54EE142 pKa = 3.94EE143 pKa = 4.08RR144 pKa = 11.84KK145 pKa = 9.71QRR147 pKa = 11.84FHH149 pKa = 7.58YY150 pKa = 10.47GGAGEE155 pKa = 4.2VNPLEE160 pKa = 4.53GQSRR164 pKa = 11.84GAFGGGFVPSTQGVPEE180 pKa = 4.45SPFHH184 pKa = 5.77RR185 pKa = 11.84TGTGLDD191 pKa = 3.36VRR193 pKa = 11.84GDD195 pKa = 3.28KK196 pKa = 9.93MFPP199 pKa = 3.24

Molecular weight: 22.73 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

199

199

199

199.0

22.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.518 ± 0.0

0.0 ± 0.0

3.015 ± 0.0

14.07 ± 0.0

3.518 ± 0.0

11.055 ± 0.0

2.01 ± 0.0

2.513 ± 0.0

13.568 ± 0.0

8.04 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.508 ± 0.0

1.508 ± 0.0

6.533 ± 0.0

6.533 ± 0.0

9.045 ± 0.0

3.518 ± 0.0

4.523 ± 0.0

4.523 ± 0.0

0.503 ± 0.0

0.503 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski