Penicilliopsis zonata CBS 506.65

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicilliopsis; Penicilliopsis zonata

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9870 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L9SG18|A0A1L9SG18_9EURO Uncharacterized protein OS=Penicilliopsis zonata CBS 506.65 OX=1073090 GN=ASPZODRAFT_2071155 PE=4 SV=1
MM1 pKa = 7.76PSVQSTLIGLTLGAALAAAAPAPSRR26 pKa = 11.84VSEE29 pKa = 4.08LVKK32 pKa = 10.72KK33 pKa = 10.55SSCTFTEE40 pKa = 4.25AAQVSEE46 pKa = 4.7SKK48 pKa = 10.58SSCSTIVIDD57 pKa = 5.59SITVPAGEE65 pKa = 4.43TLDD68 pKa = 4.15LTDD71 pKa = 3.87LTEE74 pKa = 4.45GTTVTFKK81 pKa = 10.68GTTTWEE87 pKa = 4.04YY88 pKa = 11.12EE89 pKa = 4.15EE90 pKa = 4.36WDD92 pKa = 4.01GPLLEE97 pKa = 4.83ISGTKK102 pKa = 8.31ITVNQEE108 pKa = 3.0SDD110 pKa = 3.29AVLDD114 pKa = 4.27GNGAAWWDD122 pKa = 3.97GEE124 pKa = 4.16GSNGGKK130 pKa = 8.26TKK132 pKa = 10.59PKK134 pKa = 10.07FFYY137 pKa = 10.52AHH139 pKa = 6.64SLDD142 pKa = 4.11DD143 pKa = 3.93SVISGLYY150 pKa = 9.52IKK152 pKa = 8.11NTPVQCFSIEE162 pKa = 4.06SDD164 pKa = 3.12NLLIEE169 pKa = 5.15DD170 pKa = 3.95VTIDD174 pKa = 5.14DD175 pKa = 4.86SDD177 pKa = 5.08GDD179 pKa = 4.06TDD181 pKa = 5.23DD182 pKa = 5.75LGHH185 pKa = 6.06NTDD188 pKa = 4.0GFDD191 pKa = 3.38IGEE194 pKa = 4.25STYY197 pKa = 9.71ITITGATVYY206 pKa = 10.89NQDD209 pKa = 3.35DD210 pKa = 3.99CVAINSGEE218 pKa = 3.97NIYY221 pKa = 10.72FSGGTCSGGHH231 pKa = 5.98GLSIGSVGGRR241 pKa = 11.84SDD243 pKa = 3.45NTVKK247 pKa = 10.74NVTFIDD253 pKa = 3.81STVTDD258 pKa = 3.64SEE260 pKa = 4.23NGVRR264 pKa = 11.84IKK266 pKa = 9.73TVYY269 pKa = 10.39DD270 pKa = 3.23ATGTVEE276 pKa = 5.9DD277 pKa = 3.94ITYY280 pKa = 11.17SNIKK284 pKa = 10.28LSGISDD290 pKa = 3.74YY291 pKa = 11.71GLVIEE296 pKa = 4.83QDD298 pKa = 4.03YY299 pKa = 11.49EE300 pKa = 4.38NGDD303 pKa = 3.66PTGTPSNGVTISGVTLTEE321 pKa = 3.71ITGSVDD327 pKa = 3.16DD328 pKa = 5.1DD329 pKa = 3.75AVEE332 pKa = 4.32IYY334 pKa = 10.02ILCGDD339 pKa = 4.84GSCSDD344 pKa = 3.37WTVSDD349 pKa = 3.62VDD351 pKa = 3.34ITGGKK356 pKa = 8.21TSDD359 pKa = 3.09ACEE362 pKa = 4.09NVPSTISCTT371 pKa = 3.55

Molecular weight: 38.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L9SPB4|A0A1L9SPB4_9EURO Uncharacterized protein OS=Penicilliopsis zonata CBS 506.65 OX=1073090 GN=ASPZODRAFT_13846 PE=3 SV=1
SS1 pKa = 6.85HH2 pKa = 7.5KK3 pKa = 10.71SFRR6 pKa = 11.84TKK8 pKa = 10.45QKK10 pKa = 9.84LAKK13 pKa = 9.55AQKK16 pKa = 8.59QNRR19 pKa = 11.84PIPQWIRR26 pKa = 11.84LRR28 pKa = 11.84TGNTIRR34 pKa = 11.84YY35 pKa = 5.79NAKK38 pKa = 8.89RR39 pKa = 11.84RR40 pKa = 11.84HH41 pKa = 4.14WRR43 pKa = 11.84KK44 pKa = 7.41TRR46 pKa = 11.84LGII49 pKa = 4.46

Molecular weight: 6.03 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9869

1

9870

4774852

49

9981

483.8

53.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.773 ± 0.028

1.268 ± 0.009

5.625 ± 0.018

6.184 ± 0.027

3.75 ± 0.016

6.716 ± 0.022

2.429 ± 0.011

4.825 ± 0.019

4.305 ± 0.025

9.339 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.136 ± 0.009

3.409 ± 0.014

5.972 ± 0.026

4.081 ± 0.017

6.259 ± 0.021

8.411 ± 0.029

6.016 ± 0.016

6.258 ± 0.018

1.462 ± 0.009

2.782 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski