Streptococcus satellite phage Javan319

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZJX3|A0A4D5ZJX3_9VIRU Integrase OS=Streptococcus satellite phage Javan319 OX=2558633 GN=JavanS319_0001 PE=3 SV=1
MM1 pKa = 6.88TLKK4 pKa = 10.02TFSDD8 pKa = 3.76EE9 pKa = 4.34AKK11 pKa = 9.6TFTFTYY17 pKa = 9.85EE18 pKa = 4.03FQDD21 pKa = 3.51LDD23 pKa = 3.6TAMVAGHH30 pKa = 7.15ALLGYY35 pKa = 7.54MTGTYY40 pKa = 8.23CQPVISITYY49 pKa = 8.38KK50 pKa = 11.0DD51 pKa = 3.63KK52 pKa = 9.79GTLVAEE58 pKa = 4.26YY59 pKa = 11.19VEE61 pKa = 4.12DD62 pKa = 3.62HH63 pKa = 6.67KK64 pKa = 11.65LNKK67 pKa = 8.14TFKK70 pKa = 10.29RR71 pKa = 11.84ICDD74 pKa = 3.7SFKK77 pKa = 10.87DD78 pKa = 4.26YY79 pKa = 11.51YY80 pKa = 9.82NQPVDD85 pKa = 4.45DD86 pKa = 4.12EE87 pKa = 4.7AFEE90 pKa = 4.14EE91 pKa = 5.01RR92 pKa = 11.84YY93 pKa = 9.61KK94 pKa = 10.15QARR97 pKa = 11.84VLQLKK102 pKa = 9.69EE103 pKa = 4.27SEE105 pKa = 4.49DD106 pKa = 4.18FEE108 pKa = 5.17SLLNKK113 pKa = 7.83VTGYY117 pKa = 10.23EE118 pKa = 4.69LEE120 pKa = 4.29LLDD123 pKa = 4.15YY124 pKa = 11.08ADD126 pKa = 5.31RR127 pKa = 11.84LLSDD131 pKa = 4.21KK132 pKa = 9.93PIPMDD137 pKa = 3.3SMTAFGTLEE146 pKa = 3.9MLGDD150 pKa = 3.83EE151 pKa = 5.38SISLLQKK158 pKa = 10.52LDD160 pKa = 3.26VEE162 pKa = 4.69GEE164 pKa = 4.0YY165 pKa = 10.4RR166 pKa = 11.84GLVGYY171 pKa = 10.43SDD173 pKa = 3.51QQ174 pKa = 4.33

Molecular weight: 20.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZPN1|A0A4D5ZPN1_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan319 OX=2558633 GN=JavanS319_0009 PE=4 SV=1
MM1 pKa = 7.45EE2 pKa = 6.05PGWSPKK8 pKa = 9.9RR9 pKa = 11.84GGYY12 pKa = 8.86MFDD15 pKa = 4.06SFPEE19 pKa = 3.91RR20 pKa = 11.84PKK22 pKa = 10.83YY23 pKa = 9.68MKK25 pKa = 9.67QKK27 pKa = 10.27RR28 pKa = 11.84YY29 pKa = 8.88YY30 pKa = 9.43KK31 pKa = 9.91HH32 pKa = 4.88YY33 pKa = 10.68QKK35 pKa = 10.61FVYY38 pKa = 8.34YY39 pKa = 8.95TRR41 pKa = 11.84KK42 pKa = 10.11GDD44 pKa = 3.92RR45 pKa = 11.84FWLNGLSNLKK55 pKa = 10.28

Molecular weight: 6.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14

0

14

2334

51

409

166.7

19.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.613 ± 0.279

0.428 ± 0.125

5.398 ± 0.558

8.183 ± 0.64

3.685 ± 0.382

4.584 ± 0.332

1.714 ± 0.23

6.084 ± 0.593

9.94 ± 0.661

11.525 ± 0.451

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.356 ± 0.399

5.613 ± 0.548

2.442 ± 0.415

5.184 ± 0.362

4.841 ± 0.369

5.913 ± 0.354

6.084 ± 0.575

5.27 ± 0.309

0.771 ± 0.199

4.37 ± 0.528
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski