Amino acid dipepetide frequency for Alternaria brassicicola betaendornavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.119AlaAla: 4.119 ± 0.0
1.471AlaCys: 1.471 ± 0.0
5.884AlaAsp: 5.884 ± 0.0
4.413AlaGlu: 4.413 ± 0.0
2.942AlaPhe: 2.942 ± 0.0
4.119AlaGly: 4.119 ± 0.0
1.765AlaHis: 1.765 ± 0.0
3.825AlaIle: 3.825 ± 0.0
5.001AlaLys: 5.001 ± 0.0
4.707AlaLeu: 4.707 ± 0.0
1.765AlaMet: 1.765 ± 0.0
2.059AlaAsn: 2.059 ± 0.0
1.177AlaPro: 1.177 ± 0.0
2.059AlaGln: 2.059 ± 0.0
5.296AlaArg: 5.296 ± 0.0
3.53AlaSer: 3.53 ± 0.0
4.119AlaThr: 4.119 ± 0.0
2.354AlaVal: 2.354 ± 0.0
1.471AlaTrp: 1.471 ± 0.0
3.236AlaTyr: 3.236 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.588CysAla: 0.588 ± 0.0
1.177CysCys: 1.177 ± 0.0
1.177CysAsp: 1.177 ± 0.0
0.883CysGlu: 0.883 ± 0.0
0.294CysPhe: 0.294 ± 0.0
2.648CysGly: 2.648 ± 0.0
1.765CysHis: 1.765 ± 0.0
0.883CysIle: 0.883 ± 0.0
1.471CysLys: 1.471 ± 0.0
1.471CysLeu: 1.471 ± 0.0
0.294CysMet: 0.294 ± 0.0
0.883CysAsn: 0.883 ± 0.0
0.883CysPro: 0.883 ± 0.0
0.588CysGln: 0.588 ± 0.0
0.588CysArg: 0.588 ± 0.0
1.177CysSer: 1.177 ± 0.0
1.471CysThr: 1.471 ± 0.0
1.765CysVal: 1.765 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.588CysTyr: 0.588 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.119AspAla: 4.119 ± 0.0
0.588AspCys: 0.588 ± 0.0
5.001AspAsp: 5.001 ± 0.0
4.707AspGlu: 4.707 ± 0.0
2.648AspPhe: 2.648 ± 0.0
2.354AspGly: 2.354 ± 0.0
1.471AspHis: 1.471 ± 0.0
5.001AspIle: 5.001 ± 0.0
3.825AspLys: 3.825 ± 0.0
5.296AspLeu: 5.296 ± 0.0
1.765AspMet: 1.765 ± 0.0
1.765AspAsn: 1.765 ± 0.0
2.648AspPro: 2.648 ± 0.0
2.942AspGln: 2.942 ± 0.0
3.236AspArg: 3.236 ± 0.0
2.648AspSer: 2.648 ± 0.0
2.059AspThr: 2.059 ± 0.0
3.825AspVal: 3.825 ± 0.0
1.471AspTrp: 1.471 ± 0.0
1.765AspTyr: 1.765 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.001GluAla: 5.001 ± 0.0
1.471GluCys: 1.471 ± 0.0
3.53GluAsp: 3.53 ± 0.0
5.296GluGlu: 5.296 ± 0.0
2.354GluPhe: 2.354 ± 0.0
3.236GluGly: 3.236 ± 0.0
2.354GluHis: 2.354 ± 0.0
3.236GluIle: 3.236 ± 0.0
3.53GluLys: 3.53 ± 0.0
4.119GluLeu: 4.119 ± 0.0
2.942GluMet: 2.942 ± 0.0
3.825GluAsn: 3.825 ± 0.0
2.354GluPro: 2.354 ± 0.0
2.648GluGln: 2.648 ± 0.0
2.942GluArg: 2.942 ± 0.0
3.236GluSer: 3.236 ± 0.0
4.119GluThr: 4.119 ± 0.0
2.942GluVal: 2.942 ± 0.0
1.765GluTrp: 1.765 ± 0.0
1.177GluTyr: 1.177 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.765PheAla: 1.765 ± 0.0
1.177PheCys: 1.177 ± 0.0
2.354PheAsp: 2.354 ± 0.0
2.648PheGlu: 2.648 ± 0.0
0.588PhePhe: 0.588 ± 0.0
2.648PheGly: 2.648 ± 0.0
1.177PheHis: 1.177 ± 0.0
1.765PheIle: 1.765 ± 0.0
2.648PheLys: 2.648 ± 0.0
1.765PheLeu: 1.765 ± 0.0
0.883PheMet: 0.883 ± 0.0
3.53PheAsn: 3.53 ± 0.0
1.471PhePro: 1.471 ± 0.0
0.883PheGln: 0.883 ± 0.0
1.177PheArg: 1.177 ± 0.0
2.059PheSer: 2.059 ± 0.0
1.177PheThr: 1.177 ± 0.0
5.001PheVal: 5.001 ± 0.0
0.588PheTrp: 0.588 ± 0.0
0.883PheTyr: 0.883 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
5.884GlyAla: 5.884 ± 0.0
1.177GlyCys: 1.177 ± 0.0
2.354GlyAsp: 2.354 ± 0.0
2.648GlyGlu: 2.648 ± 0.0
3.236GlyPhe: 3.236 ± 0.0
2.942GlyGly: 2.942 ± 0.0
0.588GlyHis: 0.588 ± 0.0
2.059GlyIle: 2.059 ± 0.0
5.001GlyLys: 5.001 ± 0.0
5.296GlyLeu: 5.296 ± 0.0
3.825GlyMet: 3.825 ± 0.0
2.354GlyAsn: 2.354 ± 0.0
3.236GlyPro: 3.236 ± 0.0
3.236GlyGln: 3.236 ± 0.0
5.001GlyArg: 5.001 ± 0.0
4.119GlySer: 4.119 ± 0.0
4.119GlyThr: 4.119 ± 0.0
3.53GlyVal: 3.53 ± 0.0
0.294GlyTrp: 0.294 ± 0.0
1.177GlyTyr: 1.177 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.059HisAla: 2.059 ± 0.0
0.588HisCys: 0.588 ± 0.0
2.059HisAsp: 2.059 ± 0.0
2.059HisGlu: 2.059 ± 0.0
0.294HisPhe: 0.294 ± 0.0
0.883HisGly: 0.883 ± 0.0
0.588HisHis: 0.588 ± 0.0
1.471HisIle: 1.471 ± 0.0
1.471HisLys: 1.471 ± 0.0
1.765HisLeu: 1.765 ± 0.0
1.177HisMet: 1.177 ± 0.0
2.648HisAsn: 2.648 ± 0.0
0.883HisPro: 0.883 ± 0.0
1.177HisGln: 1.177 ± 0.0
1.177HisArg: 1.177 ± 0.0
2.354HisSer: 2.354 ± 0.0
1.177HisThr: 1.177 ± 0.0
2.648HisVal: 2.648 ± 0.0
0.588HisTrp: 0.588 ± 0.0
0.294HisTyr: 0.294 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.059IleAla: 2.059 ± 0.0
0.294IleCys: 0.294 ± 0.0
4.413IleAsp: 4.413 ± 0.0
5.296IleGlu: 5.296 ± 0.0
0.588IlePhe: 0.588 ± 0.0
5.884IleGly: 5.884 ± 0.0
1.177IleHis: 1.177 ± 0.0
3.825IleIle: 3.825 ± 0.0
5.296IleLys: 5.296 ± 0.0
2.942IleLeu: 2.942 ± 0.0
2.354IleMet: 2.354 ± 0.0
4.707IleAsn: 4.707 ± 0.0
1.765IlePro: 1.765 ± 0.0
0.883IleGln: 0.883 ± 0.0
2.059IleArg: 2.059 ± 0.0
3.825IleSer: 3.825 ± 0.0
3.236IleThr: 3.236 ± 0.0
4.119IleVal: 4.119 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.765IleTyr: 1.765 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.59LysAla: 5.59 ± 0.0
0.883LysCys: 0.883 ± 0.0
2.059LysAsp: 2.059 ± 0.0
4.413LysGlu: 4.413 ± 0.0
2.942LysPhe: 2.942 ± 0.0
3.236LysGly: 3.236 ± 0.0
2.354LysHis: 2.354 ± 0.0
4.119LysIle: 4.119 ± 0.0
2.059LysLys: 2.059 ± 0.0
4.707LysLeu: 4.707 ± 0.0
1.471LysMet: 1.471 ± 0.0
2.354LysAsn: 2.354 ± 0.0
2.059LysPro: 2.059 ± 0.0
2.648LysGln: 2.648 ± 0.0
5.296LysArg: 5.296 ± 0.0
5.59LysSer: 5.59 ± 0.0
5.884LysThr: 5.884 ± 0.0
3.825LysVal: 3.825 ± 0.0
0.588LysTrp: 0.588 ± 0.0
1.471LysTyr: 1.471 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
3.236LeuAla: 3.236 ± 0.0
2.942LeuCys: 2.942 ± 0.0
5.001LeuAsp: 5.001 ± 0.0
2.354LeuGlu: 2.354 ± 0.0
2.354LeuPhe: 2.354 ± 0.0
3.53LeuGly: 3.53 ± 0.0
1.471LeuHis: 1.471 ± 0.0
4.119LeuIle: 4.119 ± 0.0
5.296LeuLys: 5.296 ± 0.0
6.472LeuLeu: 6.472 ± 0.0
3.53LeuMet: 3.53 ± 0.0
4.413LeuAsn: 4.413 ± 0.0
3.236LeuPro: 3.236 ± 0.0
2.354LeuGln: 2.354 ± 0.0
2.942LeuArg: 2.942 ± 0.0
7.649LeuSer: 7.649 ± 0.0
3.53LeuThr: 3.53 ± 0.0
6.178LeuVal: 6.178 ± 0.0
2.354LeuTrp: 2.354 ± 0.0
1.177LeuTyr: 1.177 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.354MetAla: 2.354 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.471MetAsp: 1.471 ± 0.0
2.942MetGlu: 2.942 ± 0.0
1.177MetPhe: 1.177 ± 0.0
1.471MetGly: 1.471 ± 0.0
0.588MetHis: 0.588 ± 0.0
2.648MetIle: 2.648 ± 0.0
3.53MetLys: 3.53 ± 0.0
3.53MetLeu: 3.53 ± 0.0
1.177MetMet: 1.177 ± 0.0
1.471MetAsn: 1.471 ± 0.0
1.765MetPro: 1.765 ± 0.0
1.471MetGln: 1.471 ± 0.0
1.765MetArg: 1.765 ± 0.0
4.119MetSer: 4.119 ± 0.0
3.236MetThr: 3.236 ± 0.0
2.648MetVal: 2.648 ± 0.0
0.0MetTrp: 0.0 ± 0.0
1.471MetTyr: 1.471 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
4.707AsnAla: 4.707 ± 0.0
0.883AsnCys: 0.883 ± 0.0
2.354AsnAsp: 2.354 ± 0.0
3.825AsnGlu: 3.825 ± 0.0
1.765AsnPhe: 1.765 ± 0.0
5.296AsnGly: 5.296 ± 0.0
0.883AsnHis: 0.883 ± 0.0
3.825AsnIle: 3.825 ± 0.0
0.883AsnLys: 0.883 ± 0.0
4.119AsnLeu: 4.119 ± 0.0
2.059AsnMet: 2.059 ± 0.0
3.825AsnAsn: 3.825 ± 0.0
2.059AsnPro: 2.059 ± 0.0
2.648AsnGln: 2.648 ± 0.0
3.236AsnArg: 3.236 ± 0.0
2.942AsnSer: 2.942 ± 0.0
3.236AsnThr: 3.236 ± 0.0
3.236AsnVal: 3.236 ± 0.0
2.059AsnTrp: 2.059 ± 0.0
1.177AsnTyr: 1.177 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.765ProAla: 1.765 ± 0.0
0.883ProCys: 0.883 ± 0.0
2.354ProAsp: 2.354 ± 0.0
2.354ProGlu: 2.354 ± 0.0
1.177ProPhe: 1.177 ± 0.0
1.765ProGly: 1.765 ± 0.0
1.471ProHis: 1.471 ± 0.0
1.471ProIle: 1.471 ± 0.0
2.059ProLys: 2.059 ± 0.0
2.648ProLeu: 2.648 ± 0.0
1.765ProMet: 1.765 ± 0.0
1.765ProAsn: 1.765 ± 0.0
0.588ProPro: 0.588 ± 0.0
0.883ProGln: 0.883 ± 0.0
1.765ProArg: 1.765 ± 0.0
3.825ProSer: 3.825 ± 0.0
4.413ProThr: 4.413 ± 0.0
5.001ProVal: 5.001 ± 0.0
0.0ProTrp: 0.0 ± 0.0
0.883ProTyr: 0.883 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.53GlnAla: 3.53 ± 0.0
0.883GlnCys: 0.883 ± 0.0
1.177GlnAsp: 1.177 ± 0.0
1.765GlnGlu: 1.765 ± 0.0
1.177GlnPhe: 1.177 ± 0.0
2.648GlnGly: 2.648 ± 0.0
2.059GlnHis: 2.059 ± 0.0
2.059GlnIle: 2.059 ± 0.0
0.0GlnLys: 0.0 ± 0.0
3.825GlnLeu: 3.825 ± 0.0
1.177GlnMet: 1.177 ± 0.0
2.942GlnAsn: 2.942 ± 0.0
1.471GlnPro: 1.471 ± 0.0
0.588GlnGln: 0.588 ± 0.0
2.059GlnArg: 2.059 ± 0.0
1.177GlnSer: 1.177 ± 0.0
2.942GlnThr: 2.942 ± 0.0
2.059GlnVal: 2.059 ± 0.0
1.471GlnTrp: 1.471 ± 0.0
0.588GlnTyr: 0.588 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.236ArgAla: 3.236 ± 0.0
0.588ArgCys: 0.588 ± 0.0
3.236ArgAsp: 3.236 ± 0.0
2.942ArgGlu: 2.942 ± 0.0
3.53ArgPhe: 3.53 ± 0.0
3.236ArgGly: 3.236 ± 0.0
1.471ArgHis: 1.471 ± 0.0
4.119ArgIle: 4.119 ± 0.0
3.236ArgLys: 3.236 ± 0.0
5.59ArgLeu: 5.59 ± 0.0
2.648ArgMet: 2.648 ± 0.0
2.059ArgAsn: 2.059 ± 0.0
2.059ArgPro: 2.059 ± 0.0
1.177ArgGln: 1.177 ± 0.0
2.942ArgArg: 2.942 ± 0.0
4.413ArgSer: 4.413 ± 0.0
4.119ArgThr: 4.119 ± 0.0
3.825ArgVal: 3.825 ± 0.0
0.588ArgTrp: 0.588 ± 0.0
0.883ArgTyr: 0.883 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
2.648SerAla: 2.648 ± 0.0
2.648SerCys: 2.648 ± 0.0
3.825SerAsp: 3.825 ± 0.0
4.119SerGlu: 4.119 ± 0.0
2.354SerPhe: 2.354 ± 0.0
6.178SerGly: 6.178 ± 0.0
1.177SerHis: 1.177 ± 0.0
1.765SerIle: 1.765 ± 0.0
5.884SerLys: 5.884 ± 0.0
3.825SerLeu: 3.825 ± 0.0
2.942SerMet: 2.942 ± 0.0
3.236SerAsn: 3.236 ± 0.0
4.119SerPro: 4.119 ± 0.0
2.648SerGln: 2.648 ± 0.0
3.825SerArg: 3.825 ± 0.0
5.884SerSer: 5.884 ± 0.0
5.296SerThr: 5.296 ± 0.0
3.236SerVal: 3.236 ± 0.0
1.471SerTrp: 1.471 ± 0.0
3.53SerTyr: 3.53 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.884ThrAla: 5.884 ± 0.0
1.471ThrCys: 1.471 ± 0.0
3.53ThrAsp: 3.53 ± 0.0
3.53ThrGlu: 3.53 ± 0.0
4.707ThrPhe: 4.707 ± 0.0
4.119ThrGly: 4.119 ± 0.0
0.588ThrHis: 0.588 ± 0.0
4.707ThrIle: 4.707 ± 0.0
5.296ThrLys: 5.296 ± 0.0
2.354ThrLeu: 2.354 ± 0.0
2.354ThrMet: 2.354 ± 0.0
3.825ThrAsn: 3.825 ± 0.0
2.354ThrPro: 2.354 ± 0.0
0.883ThrGln: 0.883 ± 0.0
3.236ThrArg: 3.236 ± 0.0
5.59ThrSer: 5.59 ± 0.0
3.825ThrThr: 3.825 ± 0.0
3.825ThrVal: 3.825 ± 0.0
2.354ThrTrp: 2.354 ± 0.0
0.883ThrTyr: 0.883 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
3.53ValAla: 3.53 ± 0.0
0.588ValCys: 0.588 ± 0.0
4.119ValAsp: 4.119 ± 0.0
3.825ValGlu: 3.825 ± 0.0
0.588ValPhe: 0.588 ± 0.0
4.119ValGly: 4.119 ± 0.0
2.059ValHis: 2.059 ± 0.0
3.53ValIle: 3.53 ± 0.0
5.001ValLys: 5.001 ± 0.0
5.296ValLeu: 5.296 ± 0.0
2.942ValMet: 2.942 ± 0.0
4.119ValAsn: 4.119 ± 0.0
2.648ValPro: 2.648 ± 0.0
3.53ValGln: 3.53 ± 0.0
5.001ValArg: 5.001 ± 0.0
4.119ValSer: 4.119 ± 0.0
5.296ValThr: 5.296 ± 0.0
5.59ValVal: 5.59 ± 0.0
0.588ValTrp: 0.588 ± 0.0
1.471ValTyr: 1.471 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
2.354TrpAla: 2.354 ± 0.0
0.294TrpCys: 0.294 ± 0.0
2.059TrpAsp: 2.059 ± 0.0
0.883TrpGlu: 0.883 ± 0.0
0.883TrpPhe: 0.883 ± 0.0
0.588TrpGly: 0.588 ± 0.0
0.294TrpHis: 0.294 ± 0.0
0.883TrpIle: 0.883 ± 0.0
0.588TrpLys: 0.588 ± 0.0
2.059TrpLeu: 2.059 ± 0.0
0.294TrpMet: 0.294 ± 0.0
1.471TrpAsn: 1.471 ± 0.0
1.177TrpPro: 1.177 ± 0.0
0.588TrpGln: 0.588 ± 0.0
1.177TrpArg: 1.177 ± 0.0
1.471TrpSer: 1.471 ± 0.0
0.294TrpThr: 0.294 ± 0.0
1.177TrpVal: 1.177 ± 0.0
0.588TrpTrp: 0.588 ± 0.0
0.588TrpTyr: 0.588 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.883TyrAla: 0.883 ± 0.0
0.588TyrCys: 0.588 ± 0.0
1.177TyrAsp: 1.177 ± 0.0
1.177TyrGlu: 1.177 ± 0.0
0.588TyrPhe: 0.588 ± 0.0
1.177TyrGly: 1.177 ± 0.0
2.059TyrHis: 2.059 ± 0.0
1.177TyrIle: 1.177 ± 0.0
1.765TyrLys: 1.765 ± 0.0
2.354TyrLeu: 2.354 ± 0.0
1.177TyrMet: 1.177 ± 0.0
1.765TyrAsn: 1.765 ± 0.0
0.883TyrPro: 0.883 ± 0.0
1.765TyrGln: 1.765 ± 0.0
1.177TyrArg: 1.177 ± 0.0
0.883TyrSer: 0.883 ± 0.0
1.765TyrThr: 1.765 ± 0.0
1.177TyrVal: 1.177 ± 0.0
1.471TyrTrp: 1.471 ± 0.0
0.294TyrTyr: 0.294 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3400 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski