Amino acid dipepetide frequency for Changjiang zhaovirus-like virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.111AlaAla: 4.111 ± 0.0
0.914AlaCys: 0.914 ± 0.0
5.482AlaAsp: 5.482 ± 0.0
3.198AlaGlu: 3.198 ± 0.0
4.568AlaPhe: 4.568 ± 0.0
4.111AlaGly: 4.111 ± 0.0
2.284AlaHis: 2.284 ± 0.0
4.111AlaIle: 4.111 ± 0.0
4.111AlaLys: 4.111 ± 0.0
6.396AlaLeu: 6.396 ± 0.0
3.198AlaMet: 3.198 ± 0.0
1.827AlaAsn: 1.827 ± 0.0
0.914AlaPro: 0.914 ± 0.0
3.655AlaGln: 3.655 ± 0.0
4.111AlaArg: 4.111 ± 0.0
4.111AlaSer: 4.111 ± 0.0
1.37AlaThr: 1.37 ± 0.0
5.482AlaVal: 5.482 ± 0.0
1.37AlaTrp: 1.37 ± 0.0
2.741AlaTyr: 2.741 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.827CysAla: 1.827 ± 0.0
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
1.37CysGlu: 1.37 ± 0.0
0.0CysPhe: 0.0 ± 0.0
0.457CysGly: 0.457 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.457CysIle: 0.457 ± 0.0
1.827CysLys: 1.827 ± 0.0
0.457CysLeu: 0.457 ± 0.0
0.0CysMet: 0.0 ± 0.0
0.914CysAsn: 0.914 ± 0.0
0.457CysPro: 0.457 ± 0.0
0.914CysGln: 0.914 ± 0.0
0.0CysArg: 0.0 ± 0.0
1.37CysSer: 1.37 ± 0.0
0.0CysThr: 0.0 ± 0.0
1.827CysVal: 1.827 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
2.284AspAla: 2.284 ± 0.0
0.914AspCys: 0.914 ± 0.0
1.37AspAsp: 1.37 ± 0.0
4.568AspGlu: 4.568 ± 0.0
4.568AspPhe: 4.568 ± 0.0
2.284AspGly: 2.284 ± 0.0
0.0AspHis: 0.0 ± 0.0
4.111AspIle: 4.111 ± 0.0
1.827AspLys: 1.827 ± 0.0
2.284AspLeu: 2.284 ± 0.0
2.284AspMet: 2.284 ± 0.0
2.284AspAsn: 2.284 ± 0.0
2.284AspPro: 2.284 ± 0.0
1.827AspGln: 1.827 ± 0.0
3.655AspArg: 3.655 ± 0.0
2.284AspSer: 2.284 ± 0.0
2.741AspThr: 2.741 ± 0.0
2.741AspVal: 2.741 ± 0.0
0.914AspTrp: 0.914 ± 0.0
2.284AspTyr: 2.284 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
4.568GluAla: 4.568 ± 0.0
0.0GluCys: 0.0 ± 0.0
2.284GluAsp: 2.284 ± 0.0
4.568GluGlu: 4.568 ± 0.0
2.741GluPhe: 2.741 ± 0.0
2.741GluGly: 2.741 ± 0.0
2.741GluHis: 2.741 ± 0.0
2.284GluIle: 2.284 ± 0.0
5.939GluLys: 5.939 ± 0.0
3.655GluLeu: 3.655 ± 0.0
0.457GluMet: 0.457 ± 0.0
2.741GluAsn: 2.741 ± 0.0
3.198GluPro: 3.198 ± 0.0
1.827GluGln: 1.827 ± 0.0
3.655GluArg: 3.655 ± 0.0
3.198GluSer: 3.198 ± 0.0
5.482GluThr: 5.482 ± 0.0
3.655GluVal: 3.655 ± 0.0
0.914GluTrp: 0.914 ± 0.0
4.111GluTyr: 4.111 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.655PheAla: 3.655 ± 0.0
0.457PheCys: 0.457 ± 0.0
5.025PheAsp: 5.025 ± 0.0
2.284PheGlu: 2.284 ± 0.0
0.914PhePhe: 0.914 ± 0.0
5.025PheGly: 5.025 ± 0.0
1.37PheHis: 1.37 ± 0.0
2.741PheIle: 2.741 ± 0.0
5.025PheLys: 5.025 ± 0.0
0.914PheLeu: 0.914 ± 0.0
1.37PheMet: 1.37 ± 0.0
1.37PheAsn: 1.37 ± 0.0
0.457PhePro: 0.457 ± 0.0
1.827PheGln: 1.827 ± 0.0
2.284PheArg: 2.284 ± 0.0
2.284PheSer: 2.284 ± 0.0
3.198PheThr: 3.198 ± 0.0
1.37PheVal: 1.37 ± 0.0
0.914PheTrp: 0.914 ± 0.0
1.37PheTyr: 1.37 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
5.025GlyAla: 5.025 ± 0.0
0.457GlyCys: 0.457 ± 0.0
1.37GlyAsp: 1.37 ± 0.0
0.914GlyGlu: 0.914 ± 0.0
3.655GlyPhe: 3.655 ± 0.0
3.198GlyGly: 3.198 ± 0.0
0.914GlyHis: 0.914 ± 0.0
3.655GlyIle: 3.655 ± 0.0
5.482GlyLys: 5.482 ± 0.0
3.198GlyLeu: 3.198 ± 0.0
0.457GlyMet: 0.457 ± 0.0
3.198GlyAsn: 3.198 ± 0.0
2.741GlyPro: 2.741 ± 0.0
2.284GlyGln: 2.284 ± 0.0
2.741GlyArg: 2.741 ± 0.0
5.025GlySer: 5.025 ± 0.0
6.396GlyThr: 6.396 ± 0.0
3.198GlyVal: 3.198 ± 0.0
1.37GlyTrp: 1.37 ± 0.0
4.568GlyTyr: 4.568 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.37HisAla: 1.37 ± 0.0
0.0HisCys: 0.0 ± 0.0
1.827HisAsp: 1.827 ± 0.0
0.0HisGlu: 0.0 ± 0.0
2.741HisPhe: 2.741 ± 0.0
1.827HisGly: 1.827 ± 0.0
0.0HisHis: 0.0 ± 0.0
0.914HisIle: 0.914 ± 0.0
2.284HisLys: 2.284 ± 0.0
0.914HisLeu: 0.914 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.827HisAsn: 1.827 ± 0.0
1.37HisPro: 1.37 ± 0.0
0.0HisGln: 0.0 ± 0.0
1.827HisArg: 1.827 ± 0.0
0.0HisSer: 0.0 ± 0.0
3.655HisThr: 3.655 ± 0.0
2.741HisVal: 2.741 ± 0.0
0.457HisTrp: 0.457 ± 0.0
0.914HisTyr: 0.914 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
2.741IleAla: 2.741 ± 0.0
1.827IleCys: 1.827 ± 0.0
3.198IleAsp: 3.198 ± 0.0
5.025IleGlu: 5.025 ± 0.0
1.827IlePhe: 1.827 ± 0.0
4.111IleGly: 4.111 ± 0.0
1.37IleHis: 1.37 ± 0.0
4.111IleIle: 4.111 ± 0.0
3.198IleLys: 3.198 ± 0.0
4.568IleLeu: 4.568 ± 0.0
1.37IleMet: 1.37 ± 0.0
3.655IleAsn: 3.655 ± 0.0
4.111IlePro: 4.111 ± 0.0
2.284IleGln: 2.284 ± 0.0
3.198IleArg: 3.198 ± 0.0
4.568IleSer: 4.568 ± 0.0
3.655IleThr: 3.655 ± 0.0
4.111IleVal: 4.111 ± 0.0
0.457IleTrp: 0.457 ± 0.0
2.741IleTyr: 2.741 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
7.766LysAla: 7.766 ± 0.0
0.457LysCys: 0.457 ± 0.0
2.284LysAsp: 2.284 ± 0.0
4.111LysGlu: 4.111 ± 0.0
1.37LysPhe: 1.37 ± 0.0
5.025LysGly: 5.025 ± 0.0
2.284LysHis: 2.284 ± 0.0
6.396LysIle: 6.396 ± 0.0
5.939LysLys: 5.939 ± 0.0
6.852LysLeu: 6.852 ± 0.0
3.655LysMet: 3.655 ± 0.0
1.37LysAsn: 1.37 ± 0.0
0.914LysPro: 0.914 ± 0.0
6.852LysGln: 6.852 ± 0.0
3.655LysArg: 3.655 ± 0.0
4.111LysSer: 4.111 ± 0.0
2.284LysThr: 2.284 ± 0.0
4.111LysVal: 4.111 ± 0.0
0.457LysTrp: 0.457 ± 0.0
3.655LysTyr: 3.655 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
5.482LeuAla: 5.482 ± 0.0
0.457LeuCys: 0.457 ± 0.0
2.741LeuAsp: 2.741 ± 0.0
4.111LeuGlu: 4.111 ± 0.0
3.198LeuPhe: 3.198 ± 0.0
4.568LeuGly: 4.568 ± 0.0
2.741LeuHis: 2.741 ± 0.0
4.568LeuIle: 4.568 ± 0.0
7.309LeuLys: 7.309 ± 0.0
5.025LeuLeu: 5.025 ± 0.0
2.284LeuMet: 2.284 ± 0.0
2.741LeuAsn: 2.741 ± 0.0
3.655LeuPro: 3.655 ± 0.0
4.111LeuGln: 4.111 ± 0.0
2.741LeuArg: 2.741 ± 0.0
4.111LeuSer: 4.111 ± 0.0
6.852LeuThr: 6.852 ± 0.0
4.568LeuVal: 4.568 ± 0.0
1.37LeuTrp: 1.37 ± 0.0
2.741LeuTyr: 2.741 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.741MetAla: 2.741 ± 0.0
0.0MetCys: 0.0 ± 0.0
2.284MetAsp: 2.284 ± 0.0
2.284MetGlu: 2.284 ± 0.0
0.914MetPhe: 0.914 ± 0.0
0.457MetGly: 0.457 ± 0.0
0.914MetHis: 0.914 ± 0.0
1.827MetIle: 1.827 ± 0.0
1.37MetLys: 1.37 ± 0.0
2.741MetLeu: 2.741 ± 0.0
1.37MetMet: 1.37 ± 0.0
0.914MetAsn: 0.914 ± 0.0
2.741MetPro: 2.741 ± 0.0
0.914MetGln: 0.914 ± 0.0
1.37MetArg: 1.37 ± 0.0
1.37MetSer: 1.37 ± 0.0
3.198MetThr: 3.198 ± 0.0
1.37MetVal: 1.37 ± 0.0
0.457MetTrp: 0.457 ± 0.0
0.914MetTyr: 0.914 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
2.741AsnAla: 2.741 ± 0.0
0.914AsnCys: 0.914 ± 0.0
1.37AsnAsp: 1.37 ± 0.0
4.111AsnGlu: 4.111 ± 0.0
0.457AsnPhe: 0.457 ± 0.0
3.655AsnGly: 3.655 ± 0.0
0.457AsnHis: 0.457 ± 0.0
3.198AsnIle: 3.198 ± 0.0
1.827AsnLys: 1.827 ± 0.0
5.482AsnLeu: 5.482 ± 0.0
0.457AsnMet: 0.457 ± 0.0
2.741AsnAsn: 2.741 ± 0.0
1.37AsnPro: 1.37 ± 0.0
2.741AsnGln: 2.741 ± 0.0
2.284AsnArg: 2.284 ± 0.0
0.914AsnSer: 0.914 ± 0.0
4.111AsnThr: 4.111 ± 0.0
4.568AsnVal: 4.568 ± 0.0
0.914AsnTrp: 0.914 ± 0.0
0.457AsnTyr: 0.457 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
2.284ProAla: 2.284 ± 0.0
0.0ProCys: 0.0 ± 0.0
1.37ProAsp: 1.37 ± 0.0
3.198ProGlu: 3.198 ± 0.0
1.827ProPhe: 1.827 ± 0.0
2.284ProGly: 2.284 ± 0.0
1.37ProHis: 1.37 ± 0.0
3.198ProIle: 3.198 ± 0.0
4.111ProLys: 4.111 ± 0.0
2.741ProLeu: 2.741 ± 0.0
0.0ProMet: 0.0 ± 0.0
3.198ProAsn: 3.198 ± 0.0
2.284ProPro: 2.284 ± 0.0
3.198ProGln: 3.198 ± 0.0
2.284ProArg: 2.284 ± 0.0
3.198ProSer: 3.198 ± 0.0
3.198ProThr: 3.198 ± 0.0
1.37ProVal: 1.37 ± 0.0
0.914ProTrp: 0.914 ± 0.0
2.741ProTyr: 2.741 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.655GlnAla: 3.655 ± 0.0
0.914GlnCys: 0.914 ± 0.0
4.568GlnAsp: 4.568 ± 0.0
2.741GlnGlu: 2.741 ± 0.0
2.284GlnPhe: 2.284 ± 0.0
1.37GlnGly: 1.37 ± 0.0
2.284GlnHis: 2.284 ± 0.0
3.198GlnIle: 3.198 ± 0.0
3.655GlnLys: 3.655 ± 0.0
2.741GlnLeu: 2.741 ± 0.0
0.914GlnMet: 0.914 ± 0.0
2.284GlnAsn: 2.284 ± 0.0
2.284GlnPro: 2.284 ± 0.0
2.284GlnGln: 2.284 ± 0.0
1.827GlnArg: 1.827 ± 0.0
2.284GlnSer: 2.284 ± 0.0
3.655GlnThr: 3.655 ± 0.0
1.827GlnVal: 1.827 ± 0.0
0.914GlnTrp: 0.914 ± 0.0
1.37GlnTyr: 1.37 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.655ArgAla: 3.655 ± 0.0
0.457ArgCys: 0.457 ± 0.0
2.741ArgAsp: 2.741 ± 0.0
4.111ArgGlu: 4.111 ± 0.0
1.37ArgPhe: 1.37 ± 0.0
1.37ArgGly: 1.37 ± 0.0
1.37ArgHis: 1.37 ± 0.0
5.939ArgIle: 5.939 ± 0.0
5.482ArgLys: 5.482 ± 0.0
5.482ArgLeu: 5.482 ± 0.0
1.827ArgMet: 1.827 ± 0.0
2.284ArgAsn: 2.284 ± 0.0
3.198ArgPro: 3.198 ± 0.0
0.914ArgGln: 0.914 ± 0.0
4.111ArgArg: 4.111 ± 0.0
2.284ArgSer: 2.284 ± 0.0
1.37ArgThr: 1.37 ± 0.0
3.198ArgVal: 3.198 ± 0.0
0.0ArgTrp: 0.0 ± 0.0
2.284ArgTyr: 2.284 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.025SerAla: 5.025 ± 0.0
2.741SerCys: 2.741 ± 0.0
1.827SerAsp: 1.827 ± 0.0
3.655SerGlu: 3.655 ± 0.0
2.284SerPhe: 2.284 ± 0.0
4.568SerGly: 4.568 ± 0.0
0.0SerHis: 0.0 ± 0.0
1.37SerIle: 1.37 ± 0.0
3.198SerLys: 3.198 ± 0.0
4.568SerLeu: 4.568 ± 0.0
1.37SerMet: 1.37 ± 0.0
3.655SerAsn: 3.655 ± 0.0
1.37SerPro: 1.37 ± 0.0
3.655SerGln: 3.655 ± 0.0
2.284SerArg: 2.284 ± 0.0
3.198SerSer: 3.198 ± 0.0
3.655SerThr: 3.655 ± 0.0
3.655SerVal: 3.655 ± 0.0
1.37SerTrp: 1.37 ± 0.0
3.655SerTyr: 3.655 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
5.025ThrAla: 5.025 ± 0.0
1.37ThrCys: 1.37 ± 0.0
3.655ThrAsp: 3.655 ± 0.0
2.741ThrGlu: 2.741 ± 0.0
2.741ThrPhe: 2.741 ± 0.0
3.655ThrGly: 3.655 ± 0.0
1.37ThrHis: 1.37 ± 0.0
5.482ThrIle: 5.482 ± 0.0
3.655ThrLys: 3.655 ± 0.0
4.111ThrLeu: 4.111 ± 0.0
3.655ThrMet: 3.655 ± 0.0
2.284ThrAsn: 2.284 ± 0.0
4.568ThrPro: 4.568 ± 0.0
2.284ThrGln: 2.284 ± 0.0
3.198ThrArg: 3.198 ± 0.0
3.198ThrSer: 3.198 ± 0.0
6.852ThrThr: 6.852 ± 0.0
7.309ThrVal: 7.309 ± 0.0
1.827ThrTrp: 1.827 ± 0.0
1.827ThrTyr: 1.827 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
1.827ValAla: 1.827 ± 0.0
0.0ValCys: 0.0 ± 0.0
2.284ValAsp: 2.284 ± 0.0
3.198ValGlu: 3.198 ± 0.0
2.741ValPhe: 2.741 ± 0.0
5.939ValGly: 5.939 ± 0.0
1.827ValHis: 1.827 ± 0.0
3.198ValIle: 3.198 ± 0.0
2.284ValLys: 2.284 ± 0.0
5.482ValLeu: 5.482 ± 0.0
1.827ValMet: 1.827 ± 0.0
3.655ValAsn: 3.655 ± 0.0
5.025ValPro: 5.025 ± 0.0
3.655ValGln: 3.655 ± 0.0
4.568ValArg: 4.568 ± 0.0
5.025ValSer: 5.025 ± 0.0
4.111ValThr: 4.111 ± 0.0
3.198ValVal: 3.198 ± 0.0
0.914ValTrp: 0.914 ± 0.0
2.284ValTyr: 2.284 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.457TrpAla: 0.457 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
1.37TrpGlu: 1.37 ± 0.0
0.457TrpPhe: 0.457 ± 0.0
0.457TrpGly: 0.457 ± 0.0
0.457TrpHis: 0.457 ± 0.0
0.914TrpIle: 0.914 ± 0.0
3.198TrpLys: 3.198 ± 0.0
2.284TrpLeu: 2.284 ± 0.0
0.914TrpMet: 0.914 ± 0.0
0.457TrpAsn: 0.457 ± 0.0
0.457TrpPro: 0.457 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.37TrpArg: 1.37 ± 0.0
1.37TrpSer: 1.37 ± 0.0
1.37TrpThr: 1.37 ± 0.0
1.37TrpVal: 1.37 ± 0.0
1.37TrpTrp: 1.37 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.827TyrAla: 1.827 ± 0.0
0.0TyrCys: 0.0 ± 0.0
1.827TyrAsp: 1.827 ± 0.0
3.198TyrGlu: 3.198 ± 0.0
3.198TyrPhe: 3.198 ± 0.0
2.741TyrGly: 2.741 ± 0.0
0.914TyrHis: 0.914 ± 0.0
0.457TyrIle: 0.457 ± 0.0
1.827TyrLys: 1.827 ± 0.0
5.939TyrLeu: 5.939 ± 0.0
2.284TyrMet: 2.284 ± 0.0
1.37TyrAsn: 1.37 ± 0.0
1.37TyrPro: 1.37 ± 0.0
1.827TyrGln: 1.827 ± 0.0
2.284TyrArg: 2.284 ± 0.0
3.198TyrSer: 3.198 ± 0.0
3.655TyrThr: 3.655 ± 0.0
1.37TyrVal: 1.37 ± 0.0
1.37TyrTrp: 1.37 ± 0.0
2.284TyrTyr: 2.284 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2190 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski