Maize-associated totivirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; unclassified Totiviridae

Average proteome isoelectric point is 7.04

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A0N9MPY0|A0A0N9MPY0_9VIRU Capsid protein OS=Maize-associated totivirus 1 OX=1729670 PE=4 SV=1
MM1 pKa = 7.59DD2 pKa = 3.86TFVRR6 pKa = 11.84HH7 pKa = 5.63FFKK10 pKa = 10.78EE11 pKa = 4.03VTTPGVPFVLDD22 pKa = 4.21DD23 pKa = 4.33ACHH26 pKa = 5.44TWTYY30 pKa = 10.17FQGFKK35 pKa = 10.36TVVTGDD41 pKa = 3.39ASKK44 pKa = 11.15SSARR48 pKa = 11.84DD49 pKa = 3.04IYY51 pKa = 11.26QAMTPLGMLEE61 pKa = 4.1TAFEE65 pKa = 4.71SMGSNYY71 pKa = 10.7DD72 pKa = 3.6GLTKK76 pKa = 10.65NYY78 pKa = 7.33LTPEE82 pKa = 3.93GAINYY87 pKa = 9.99SNIHH91 pKa = 6.41DD92 pKa = 4.03TLKK95 pKa = 10.89QSGGMNNQEE104 pKa = 4.83LSTFMAFCQTISWHH118 pKa = 6.73DD119 pKa = 3.44NHH121 pKa = 5.78VTLLFNMLRR130 pKa = 11.84YY131 pKa = 9.76VILMKK136 pKa = 10.75SKK138 pKa = 10.5EE139 pKa = 4.34SKK141 pKa = 10.33QNLNGALGRR150 pKa = 11.84FQEE153 pKa = 5.08DD154 pKa = 3.44FLEE157 pKa = 5.11INMDD161 pKa = 4.33PACQLPAGFEE171 pKa = 3.71LALRR175 pKa = 11.84DD176 pKa = 3.36RR177 pKa = 11.84VAATRR182 pKa = 11.84PRR184 pKa = 11.84ARR186 pKa = 11.84QAARR190 pKa = 11.84VTVACPLLPFPGVPTLLLPTQCTPYY215 pKa = 10.35PIPFEE220 pKa = 4.04LAGKK224 pKa = 10.2FDD226 pKa = 3.9DD227 pKa = 3.74TMGRR231 pKa = 11.84FDD233 pKa = 4.85RR234 pKa = 11.84RR235 pKa = 11.84GTRR238 pKa = 11.84LKK240 pKa = 10.25IDD242 pKa = 3.56VAWRR246 pKa = 11.84VMNFLQDD253 pKa = 4.1QSYY256 pKa = 8.05TWQCEE261 pKa = 3.87YY262 pKa = 10.67RR263 pKa = 11.84GTRR266 pKa = 11.84IGQQEE271 pKa = 4.44YY272 pKa = 10.05VRR274 pKa = 11.84GRR276 pKa = 11.84YY277 pKa = 9.93SNMIWPVLYY286 pKa = 10.44QPEE289 pKa = 4.66DD290 pKa = 3.51NDD292 pKa = 3.26EE293 pKa = 4.28DD294 pKa = 4.11VVLRR298 pKa = 11.84RR299 pKa = 11.84ITEE302 pKa = 3.81VGLPDD307 pKa = 3.66VPLPPMHH314 pKa = 7.07NEE316 pKa = 3.66FFKK319 pKa = 11.18GKK321 pKa = 9.26SVEE324 pKa = 4.05YY325 pKa = 9.53KK326 pKa = 8.65YY327 pKa = 11.15QSIRR331 pKa = 11.84RR332 pKa = 11.84GLAARR337 pKa = 11.84FRR339 pKa = 11.84GAKK342 pKa = 9.25IDD344 pKa = 3.37ISSYY348 pKa = 8.68GAHH351 pKa = 5.7VPVLKK356 pKa = 10.57KK357 pKa = 10.46ISTVTYY363 pKa = 10.22AVNEE367 pKa = 4.09GLRR370 pKa = 11.84TVRR373 pKa = 11.84GFIEE377 pKa = 4.44RR378 pKa = 11.84AAQDD382 pKa = 3.36FRR384 pKa = 11.84LAPVAGPGVIPPAEE398 pKa = 3.96QAPDD402 pKa = 3.21ASAATGGPEE411 pKa = 4.81AGGTSAA417 pKa = 5.6

Molecular weight:
46.67 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A0N9MPY0|A0A0N9MPY0_9VIRU Capsid protein OS=Maize-associated totivirus 1 OX=1729670 PE=4 SV=1
MM1 pKa = 7.59DD2 pKa = 3.86TFVRR6 pKa = 11.84HH7 pKa = 5.63FFKK10 pKa = 10.78EE11 pKa = 4.03VTTPGVPFVLDD22 pKa = 4.21DD23 pKa = 4.33ACHH26 pKa = 5.44TWTYY30 pKa = 10.17FQGFKK35 pKa = 10.36TVVTGDD41 pKa = 3.39ASKK44 pKa = 11.15SSARR48 pKa = 11.84DD49 pKa = 3.04IYY51 pKa = 11.26QAMTPLGMLEE61 pKa = 4.1TAFEE65 pKa = 4.71SMGSNYY71 pKa = 10.7DD72 pKa = 3.6GLTKK76 pKa = 10.65NYY78 pKa = 7.33LTPEE82 pKa = 3.93GAINYY87 pKa = 9.99SNIHH91 pKa = 6.41DD92 pKa = 4.03TLKK95 pKa = 10.89QSGGMNNQEE104 pKa = 4.83LSTFMAFCQTISWHH118 pKa = 6.73DD119 pKa = 3.44NHH121 pKa = 5.78VTLLFNMLRR130 pKa = 11.84YY131 pKa = 9.76VILMKK136 pKa = 10.75SKK138 pKa = 10.5EE139 pKa = 4.34SKK141 pKa = 10.33QNLNGALGRR150 pKa = 11.84FQEE153 pKa = 5.08DD154 pKa = 3.44FLEE157 pKa = 5.11INMDD161 pKa = 4.33PACQLPAGFEE171 pKa = 3.71LALRR175 pKa = 11.84DD176 pKa = 3.36RR177 pKa = 11.84VAATRR182 pKa = 11.84PRR184 pKa = 11.84ARR186 pKa = 11.84QAARR190 pKa = 11.84VTVACPLLPFPGVPTLLLPTQCTPYY215 pKa = 10.35PIPFEE220 pKa = 4.04LAGKK224 pKa = 10.2FDD226 pKa = 3.9DD227 pKa = 3.74TMGRR231 pKa = 11.84FDD233 pKa = 4.85RR234 pKa = 11.84RR235 pKa = 11.84GTRR238 pKa = 11.84LKK240 pKa = 10.25IDD242 pKa = 3.56VAWRR246 pKa = 11.84VMNFLQDD253 pKa = 4.1QSYY256 pKa = 8.05TWQCEE261 pKa = 3.87YY262 pKa = 10.67RR263 pKa = 11.84GTRR266 pKa = 11.84IGQQEE271 pKa = 4.44YY272 pKa = 10.05VRR274 pKa = 11.84GRR276 pKa = 11.84YY277 pKa = 9.93SNMIWPVLYY286 pKa = 10.44QPEE289 pKa = 4.66DD290 pKa = 3.51NDD292 pKa = 3.26EE293 pKa = 4.28DD294 pKa = 4.11VVLRR298 pKa = 11.84RR299 pKa = 11.84ITEE302 pKa = 3.81VGLPDD307 pKa = 3.66VPLPPMHH314 pKa = 7.07NEE316 pKa = 3.66FFKK319 pKa = 11.18GKK321 pKa = 9.26SVEE324 pKa = 4.05YY325 pKa = 9.53KK326 pKa = 8.65YY327 pKa = 11.15QSIRR331 pKa = 11.84RR332 pKa = 11.84GLAARR337 pKa = 11.84FRR339 pKa = 11.84GAKK342 pKa = 9.25IDD344 pKa = 3.37ISSYY348 pKa = 8.68GAHH351 pKa = 5.7VPVLKK356 pKa = 10.57KK357 pKa = 10.46ISTVTYY363 pKa = 10.22AVNEE367 pKa = 4.09GLRR370 pKa = 11.84TVRR373 pKa = 11.84GFIEE377 pKa = 4.37RR378 pKa = 11.84AAQDD382 pKa = 3.76FSSCPGCRR390 pKa = 11.84SWRR393 pKa = 11.84DD394 pKa = 3.19TASRR398 pKa = 11.84AGTRR402 pKa = 11.84CLSCNRR408 pKa = 11.84GTGSWWDD415 pKa = 3.31QCLGEE420 pKa = 4.32VAGEE424 pKa = 4.49AITMLNATPGGDD436 pKa = 3.14GPYY439 pKa = 9.82IRR441 pKa = 11.84RR442 pKa = 11.84KK443 pKa = 10.2EE444 pKa = 4.06PLTLDD449 pKa = 3.61NVPVWVNIRR458 pKa = 11.84RR459 pKa = 11.84NHH461 pKa = 4.9LTAVDD466 pKa = 3.74RR467 pKa = 11.84QDD469 pKa = 3.35AKK471 pKa = 10.89HH472 pKa = 5.88VLGFVLPGKK481 pKa = 9.84SFEE484 pKa = 4.13VGGFGRR490 pKa = 11.84YY491 pKa = 8.27LVGKK495 pKa = 8.18TSVAATAIPCDD506 pKa = 4.6GVWLMYY512 pKa = 10.81VSVTTPANILPPIVKK527 pKa = 8.62RR528 pKa = 11.84TLSAMFSAVDD538 pKa = 4.04GYY540 pKa = 11.2YY541 pKa = 10.44FHH543 pKa = 7.96DD544 pKa = 4.89ADD546 pKa = 3.74TTKK549 pKa = 10.91YY550 pKa = 10.19LRR552 pKa = 11.84KK553 pKa = 8.39TFDD556 pKa = 2.72VDD558 pKa = 3.81RR559 pKa = 11.84NVIAHH564 pKa = 7.69AARR567 pKa = 11.84PTPPHH572 pKa = 5.93EE573 pKa = 4.74GEE575 pKa = 4.1FEE577 pKa = 4.09RR578 pKa = 11.84AVITAEE584 pKa = 3.76HH585 pKa = 6.0HH586 pKa = 3.99THH588 pKa = 5.67YY589 pKa = 10.47RR590 pKa = 11.84PEE592 pKa = 4.46EE593 pKa = 3.34IWAIAKK599 pKa = 8.59QHH601 pKa = 4.88TTTLRR606 pKa = 11.84AMGIVLANLRR616 pKa = 11.84KK617 pKa = 9.22IQGVTEE623 pKa = 4.01ATVATFLAYY632 pKa = 9.84IMTVRR637 pKa = 11.84PQVAYY642 pKa = 10.35LVATSRR648 pKa = 11.84RR649 pKa = 11.84IWRR652 pKa = 11.84SKK654 pKa = 10.3NVAEE658 pKa = 4.08LTEE661 pKa = 4.04VLKK664 pKa = 11.12DD665 pKa = 2.83IATPIKK671 pKa = 10.62SMHH674 pKa = 4.66QHH676 pKa = 5.65EE677 pKa = 4.78VCDD680 pKa = 3.76LTEE683 pKa = 4.52LFEE686 pKa = 4.38LQCLVNRR693 pKa = 11.84GVGQIDD699 pKa = 3.11WRR701 pKa = 11.84KK702 pKa = 8.72EE703 pKa = 3.84RR704 pKa = 11.84NHH706 pKa = 5.84RR707 pKa = 11.84TSPDD711 pKa = 3.32VVKK714 pKa = 11.08VSLEE718 pKa = 4.07DD719 pKa = 3.41VVKK722 pKa = 10.37YY723 pKa = 9.31ATEE726 pKa = 3.76IFLLGKK732 pKa = 9.98AHH734 pKa = 7.11GYY736 pKa = 10.03HH737 pKa = 5.4YY738 pKa = 11.05RR739 pKa = 11.84KK740 pKa = 8.92MDD742 pKa = 3.37RR743 pKa = 11.84QKK745 pKa = 10.91YY746 pKa = 9.47ISARR750 pKa = 11.84WEE752 pKa = 3.68WSPTGSIHH760 pKa = 5.86SQYY763 pKa = 10.79PEE765 pKa = 3.98DD766 pKa = 3.77EE767 pKa = 4.36RR768 pKa = 11.84YY769 pKa = 9.93IPGNYY774 pKa = 8.18RR775 pKa = 11.84QKK777 pKa = 10.02TKK779 pKa = 10.49FVALNMMSRR788 pKa = 11.84QHH790 pKa = 6.35VDD792 pKa = 2.47SMFLRR797 pKa = 11.84KK798 pKa = 9.52PEE800 pKa = 3.62IHH802 pKa = 6.53AWTSVKK808 pKa = 10.73YY809 pKa = 9.62EE810 pKa = 3.87WAKK813 pKa = 10.25QRR815 pKa = 11.84AIYY818 pKa = 10.09GVDD821 pKa = 3.3LTSTVITNFAMYY833 pKa = 10.0RR834 pKa = 11.84CEE836 pKa = 4.02EE837 pKa = 4.23VFKK840 pKa = 11.11HH841 pKa = 5.86RR842 pKa = 11.84FPVGEE847 pKa = 3.83EE848 pKa = 3.42AAADD852 pKa = 3.84RR853 pKa = 11.84VHH855 pKa = 6.86RR856 pKa = 11.84RR857 pKa = 11.84LKK859 pKa = 10.67IMLEE863 pKa = 4.24DD864 pKa = 4.03NEE866 pKa = 4.66SFCYY870 pKa = 10.81DD871 pKa = 3.25FDD873 pKa = 5.14DD874 pKa = 5.86FNAQHH879 pKa = 6.09STQAMQAVLVAYY891 pKa = 10.27LNVFQADD898 pKa = 3.36MSDD901 pKa = 3.81DD902 pKa = 3.53QRR904 pKa = 11.84EE905 pKa = 4.13AMSWVIDD912 pKa = 3.76SLSDD916 pKa = 3.6VTIHH920 pKa = 6.46NSNVQPPEE928 pKa = 3.75QYY930 pKa = 9.89EE931 pKa = 4.25LKK933 pKa = 9.94GTLLSGWRR941 pKa = 11.84LTTFMNTALNYY952 pKa = 10.15VYY954 pKa = 10.1FKK956 pKa = 11.06AAGCFDD962 pKa = 3.23IGGVRR967 pKa = 11.84DD968 pKa = 3.92SVHH971 pKa = 6.66NGDD974 pKa = 5.02DD975 pKa = 3.41VLVSIKK981 pKa = 10.63HH982 pKa = 5.58IGAAVKK988 pKa = 9.6IHH990 pKa = 6.28HH991 pKa = 6.89RR992 pKa = 11.84MAQINARR999 pKa = 11.84AQPAKK1004 pKa = 10.67CNVFSVGEE1012 pKa = 3.91FLRR1015 pKa = 11.84VEE1017 pKa = 4.23HH1018 pKa = 7.01KK1019 pKa = 10.46VDD1021 pKa = 3.32KK1022 pKa = 10.22DD1023 pKa = 3.38TGLGAQYY1030 pKa = 9.02LTRR1033 pKa = 11.84ACATLVHH1040 pKa = 6.2SRR1042 pKa = 11.84CEE1044 pKa = 4.19SQEE1047 pKa = 4.0PEE1049 pKa = 4.31HH1050 pKa = 6.18LTGAVKK1056 pKa = 10.65AIVTRR1061 pKa = 11.84ARR1063 pKa = 11.84EE1064 pKa = 3.86VFEE1067 pKa = 4.02RR1068 pKa = 11.84AKK1070 pKa = 10.44ISQALLADD1078 pKa = 4.33LVRR1081 pKa = 11.84SAIRR1085 pKa = 11.84RR1086 pKa = 11.84VAAVFHH1092 pKa = 6.74RR1093 pKa = 11.84PAKK1096 pKa = 8.7EE1097 pKa = 3.65AFVIAEE1103 pKa = 3.91LHH1105 pKa = 5.85AVVGGASTEE1114 pKa = 4.05DD1115 pKa = 3.59FAPIDD1120 pKa = 3.6FKK1122 pKa = 11.3INEE1125 pKa = 3.92RR1126 pKa = 11.84CEE1128 pKa = 3.96YY1129 pKa = 10.67DD1130 pKa = 3.55RR1131 pKa = 11.84EE1132 pKa = 4.17RR1133 pKa = 11.84CASDD1137 pKa = 3.45KK1138 pKa = 11.45DD1139 pKa = 4.28DD1140 pKa = 3.67MVVTQDD1146 pKa = 4.31LYY1148 pKa = 10.84PGIFDD1153 pKa = 3.83YY1154 pKa = 11.32ARR1156 pKa = 11.84TLAQAYY1162 pKa = 9.23EE1163 pKa = 4.37GVLDD1167 pKa = 3.81EE1168 pKa = 4.31QQAKK1172 pKa = 9.91RR1173 pKa = 11.84RR1174 pKa = 11.84VISATTRR1181 pKa = 11.84QISVTRR1187 pKa = 11.84KK1188 pKa = 6.37TWLDD1192 pKa = 3.4IVPLPTDD1199 pKa = 3.41TFYY1202 pKa = 11.15RR1203 pKa = 11.84YY1204 pKa = 9.68GRR1206 pKa = 11.84ALYY1209 pKa = 10.54KK1210 pKa = 9.63MYY1212 pKa = 10.33HH1213 pKa = 6.28GLVSMPHH1220 pKa = 6.11LEE1222 pKa = 3.84KK1223 pKa = 10.88ARR1225 pKa = 11.84FVGIPPIALLDD1236 pKa = 3.65SRR1238 pKa = 11.84SRR1240 pKa = 11.84NIIRR1244 pKa = 11.84NIIVEE1249 pKa = 4.16ASDD1252 pKa = 3.14VEE1254 pKa = 4.31YY1255 pKa = 10.99ALRR1258 pKa = 11.84VLLL1261 pKa = 4.86

Molecular weight:
143.14 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1678

417

1261

839.0

94.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.701 ± 0.137

1.669 ± 0.103

5.721 ± 0.092

5.423 ± 0.173

4.648 ± 0.387

6.198 ± 0.659

2.741 ± 0.475

4.827 ± 0.335

4.35 ± 0.229

7.628 ± 0.128

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.741 ± 0.168

3.516 ± 0.143

5.006 ± 0.763

3.993 ± 0.252

7.569 ± 0.274

5.066 ± 0.12

6.853 ± 0.152

7.926 ± 0.541

1.49 ± 0.13

3.933 ± 0.043

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski