Tenacibaculum jejuense

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tenacibaculum

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3944 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A238UEW4|A0A238UEW4_9FLAO Glycosyl transferase group 1 family protein OS=Tenacibaculum jejuense OX=584609 GN=TJEJU_4079 PE=4 SV=1
MM1 pKa = 7.88RR2 pKa = 11.84KK3 pKa = 8.09TITFLYY9 pKa = 10.15AVLISISIFGQTSLSTGDD27 pKa = 3.23IAFLSVNFDD36 pKa = 3.21GSDD39 pKa = 3.39DD40 pKa = 3.62YY41 pKa = 12.21SFILFKK47 pKa = 10.97DD48 pKa = 3.03IDD50 pKa = 4.47ANTTITFTDD59 pKa = 4.33CGWSDD64 pKa = 3.32GSASFICNVGDD75 pKa = 3.82ANGWTWLSGSALAAGTVITITNEE98 pKa = 3.35SSASIGTVSGVTSLLSSAGDD118 pKa = 3.3QIFAYY123 pKa = 9.76QGSASSPTFLAGINSNEE140 pKa = 4.21VADD143 pKa = 4.19DD144 pKa = 4.18SNWNGEE150 pKa = 4.17VTSNSTSALPDD161 pKa = 3.18QLTNGTNAIRR171 pKa = 11.84LHH173 pKa = 6.03NMGSEE178 pKa = 3.99VDD180 pKa = 3.12NWQYY184 pKa = 11.46NCTVVSGDD192 pKa = 3.37VTTVRR197 pKa = 11.84AAINNIANWSNNNGTAFSPSAPNCLWNITFASPPSTVTSVTVPSNATYY245 pKa = 10.77SAGQNLDD252 pKa = 3.34FTVSFNEE259 pKa = 4.52TITVNTTGGTPQLALTIGSTTRR281 pKa = 11.84QATFVSGSGTANLLFRR297 pKa = 11.84YY298 pKa = 6.91TVQAGDD304 pKa = 3.78SDD306 pKa = 4.03TDD308 pKa = 4.46GIAVGSLAANGGTIQNGSGTDD329 pKa = 3.33ADD331 pKa = 4.16LTLNSIGSTTNVFVDD346 pKa = 5.68GIAPTGYY353 pKa = 10.25SVTIDD358 pKa = 3.35QSPINAANDD367 pKa = 3.7DD368 pKa = 3.94AVSFTFASAEE378 pKa = 3.88VGTTYY383 pKa = 11.09NYY385 pKa = 11.26AFTSSGAPGSVTGSGTIATASDD407 pKa = 3.42QTTGIDD413 pKa = 3.27ISGLADD419 pKa = 3.41GMITLSVTLTDD430 pKa = 3.62VNGNTGAAATDD441 pKa = 3.85TEE443 pKa = 4.68TKK445 pKa = 9.33EE446 pKa = 4.32TVAPTGYY453 pKa = 10.31SVTIDD458 pKa = 3.35QSPINAANDD467 pKa = 3.7DD468 pKa = 3.94AVSFTFASAEE478 pKa = 3.88VGTTYY483 pKa = 11.09NYY485 pKa = 11.26AFTSSGAPGSVTGSGTIATASDD507 pKa = 3.98QITGIDD513 pKa = 3.26ISGLADD519 pKa = 3.31GTITLTVTLTDD530 pKa = 3.49VNGNTGAVATDD541 pKa = 3.69TEE543 pKa = 4.69TKK545 pKa = 9.32EE546 pKa = 4.32TVAPTGYY553 pKa = 10.31SVTIDD558 pKa = 3.35QSPINAANDD567 pKa = 3.66DD568 pKa = 4.04VVSFTFASAEE578 pKa = 3.88VGTTYY583 pKa = 11.09NYY585 pKa = 11.26AFTSSGAPGSVTGSGTIATASDD607 pKa = 3.98QITGIDD613 pKa = 3.26ISGLADD619 pKa = 3.37GMITLTVTLTDD630 pKa = 3.49VNGNTGAAATDD641 pKa = 3.85TEE643 pKa = 4.68TKK645 pKa = 9.33EE646 pKa = 4.32TVAPTGYY653 pKa = 10.31SVTIDD658 pKa = 3.35QSPINAANDD667 pKa = 3.7DD668 pKa = 3.94AVSFTFASAEE678 pKa = 3.88VGTTYY683 pKa = 11.09NYY685 pKa = 11.26AFTSSGAPGSVTGSGTIATASDD707 pKa = 3.98QITGIDD713 pKa = 3.26ISGLADD719 pKa = 3.31GTITLTVTLTDD730 pKa = 3.49VNGNTGAAATDD741 pKa = 3.85TEE743 pKa = 4.68TKK745 pKa = 9.33EE746 pKa = 4.32TVAPTGYY753 pKa = 10.31SVTIDD758 pKa = 3.35QSPINAANDD767 pKa = 3.7DD768 pKa = 3.94AVSFTFASAEE778 pKa = 3.88VGTTYY783 pKa = 11.09NYY785 pKa = 11.26AFTSSGAPGSVTGSGIVATATDD807 pKa = 4.36QITGIDD813 pKa = 3.55INGLADD819 pKa = 3.5GTITLTVTLTDD830 pKa = 3.49VNGNTGAAATDD841 pKa = 4.05TEE843 pKa = 4.71TKK845 pKa = 10.29DD846 pKa = 3.53ASIPLDD852 pKa = 3.29PTINVPSGAITVTTTNQTISGNYY875 pKa = 8.5AEE877 pKa = 4.77NGITIHH883 pKa = 7.35AYY885 pKa = 9.64IDD887 pKa = 3.38TDD889 pKa = 4.0NNGTADD895 pKa = 3.58NTTSLGSAIVTGNAWSFTVNLTADD919 pKa = 3.48SVNNFVVQAEE929 pKa = 4.26DD930 pKa = 3.37ASGNTSTYY938 pKa = 10.46VDD940 pKa = 4.14VPTITQTNTITWTGNTSNSWTTAGNWDD967 pKa = 4.22TNTVPTSAANVIIPSGLTNYY987 pKa = 7.21PTISSAVTVNSIEE1000 pKa = 4.23IASGASLIANTSVTANVTYY1019 pKa = 10.64NRR1021 pKa = 11.84NLPTTNWYY1029 pKa = 9.84LVSAPVSNEE1038 pKa = 3.7TQEE1041 pKa = 5.75DD1042 pKa = 4.32IINNPSHH1049 pKa = 6.64NFATGSGSNIGIGAFTNNGANPWVYY1074 pKa = 9.83ATNTTTGPLVSGAGVSMKK1092 pKa = 10.32LAAAGDD1098 pKa = 3.75VSITGNINTTNVSFPIATGTRR1119 pKa = 11.84NNFNLIGNPYY1129 pKa = 8.4TSFVNSSTFAAANTGLLSEE1148 pKa = 4.32EE1149 pKa = 4.88TVWLWDD1155 pKa = 3.29GSQYY1159 pKa = 8.9VTYY1162 pKa = 11.13NNMSPIEE1169 pKa = 4.03VAPAQGFFVEE1179 pKa = 4.86AAGSGNVTFSTANQSHH1195 pKa = 5.47QNSDD1199 pKa = 2.98TFLRR1203 pKa = 11.84QVPNPTFEE1211 pKa = 5.75LFIQNDD1217 pKa = 3.17SDD1219 pKa = 3.66KK1220 pKa = 11.2RR1221 pKa = 11.84STKK1224 pKa = 10.07VFYY1227 pKa = 11.17ANGKK1231 pKa = 7.37TKK1233 pKa = 10.61GFDD1236 pKa = 2.94NGYY1239 pKa = 9.25DD1240 pKa = 3.14SKK1242 pKa = 10.64MFAGISEE1249 pKa = 4.17NFGIFTEE1256 pKa = 4.41LLEE1259 pKa = 4.39NNQGKK1264 pKa = 9.57KK1265 pKa = 10.16LAIQTLPNSNLEE1277 pKa = 4.17TMIVPVGIIANAGEE1291 pKa = 4.76EE1292 pKa = 4.3ITFSMSSKK1300 pKa = 10.37NLPTGVEE1307 pKa = 4.1IYY1309 pKa = 11.08LEE1311 pKa = 4.3DD1312 pKa = 3.7KK1313 pKa = 11.16VNNTMINLTEE1323 pKa = 4.25RR1324 pKa = 11.84NHH1326 pKa = 5.75TLTLKK1331 pKa = 9.65TALNASGRR1339 pKa = 11.84FYY1341 pKa = 10.85IHH1343 pKa = 5.58TTAKK1347 pKa = 10.28RR1348 pKa = 11.84LSNEE1352 pKa = 4.44DD1353 pKa = 3.7IINNLNNVSIYY1364 pKa = 10.61KK1365 pKa = 9.91SASKK1369 pKa = 10.41EE1370 pKa = 3.9VTISGLQGSGDD1381 pKa = 2.97IKK1383 pKa = 11.04VFSILGKK1390 pKa = 9.92QVGSTSINSNGTSKK1404 pKa = 10.62IEE1406 pKa = 4.49LPDD1409 pKa = 4.2LPSGIYY1415 pKa = 9.59IVRR1418 pKa = 11.84LSSEE1422 pKa = 4.1FGKK1425 pKa = 8.84LTRR1428 pKa = 11.84KK1429 pKa = 9.91IILEE1433 pKa = 3.97

Molecular weight: 147.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A238U9H0|A0A238U9H0_9FLAO Probable ABC-type transport system permease component OS=Tenacibaculum jejuense OX=584609 GN=TJEJU_2160 PE=4 SV=1
MM1 pKa = 7.46KK2 pKa = 10.55FEE4 pKa = 5.36LYY6 pKa = 10.21LIKK9 pKa = 10.16IIMQSYY15 pKa = 7.54NTSLSLINTIIKK27 pKa = 8.33TDD29 pKa = 3.08NRR31 pKa = 11.84ISVRR35 pKa = 11.84RR36 pKa = 11.84FFPRR40 pKa = 11.84PP41 pKa = 3.17

Molecular weight: 4.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3944

0

3944

1390372

23

5673

352.5

39.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.574 ± 0.039

0.742 ± 0.015

5.566 ± 0.038

6.654 ± 0.048

5.396 ± 0.04

6.074 ± 0.055

1.663 ± 0.022

8.209 ± 0.042

8.528 ± 0.087

9.117 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.808 ± 0.018

6.892 ± 0.044

3.148 ± 0.031

3.23 ± 0.022

3.285 ± 0.03

6.797 ± 0.048

6.084 ± 0.071

6.122 ± 0.044

1.013 ± 0.014

4.097 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski