Aeromonas phage Asswx_1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Emmerichvirinae; Ceceduovirus; unclassified Ceceduovirus

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 407 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A411B8P3|A0A411B8P3_9CAUD Uncharacterized protein OS=Aeromonas phage Asswx_1 OX=2419739 GN=ASswx1_348 PE=4 SV=1
MM1 pKa = 7.46IFKK4 pKa = 10.28IGQSYY9 pKa = 10.34KK10 pKa = 8.69IVSMFGVAVEE20 pKa = 6.06HH21 pKa = 6.52MDD23 pKa = 3.76CLNDD27 pKa = 4.21VIVCTDD33 pKa = 3.75FDD35 pKa = 4.48EE36 pKa = 5.47DD37 pKa = 5.11SGVAWFDD44 pKa = 3.12GLMWTNFGDD53 pKa = 3.44RR54 pKa = 11.84GNYY57 pKa = 8.05ILAMSDD63 pKa = 3.19EE64 pKa = 4.87GIEE67 pKa = 4.62NFGTDD72 pKa = 3.19YY73 pKa = 11.52GSFLSNVLEE82 pKa = 4.18EE83 pKa = 4.47VKK85 pKa = 10.84

Molecular weight: 9.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A411B833|A0A411B833_9CAUD Uncharacterized protein OS=Aeromonas phage Asswx_1 OX=2419739 GN=ASswx1_128 PE=4 SV=1
MM1 pKa = 7.24FAFTRR6 pKa = 11.84VIFLGIIYY14 pKa = 10.01GVGSNQCGEE23 pKa = 4.21YY24 pKa = 9.89HH25 pKa = 5.62WVGTLSVTRR34 pKa = 11.84RR35 pKa = 11.84GLVIKK40 pKa = 10.0YY41 pKa = 9.21CQGNKK46 pKa = 6.56WRR48 pKa = 11.84VMLVTSRR55 pKa = 11.84GLYY58 pKa = 10.51KK59 pKa = 10.71NIQSGVWKK67 pKa = 10.66VLL69 pKa = 3.3

Molecular weight: 7.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

407

0

407

70352

31

1316

172.9

19.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.978 ± 0.174

1.355 ± 0.072

6.841 ± 0.11

7.181 ± 0.169

4.664 ± 0.103

6.364 ± 0.159

2.01 ± 0.065

7.174 ± 0.105

7.667 ± 0.193

6.941 ± 0.103

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.187 ± 0.082

5.551 ± 0.108

3.224 ± 0.074

2.999 ± 0.075

4.26 ± 0.077

6.543 ± 0.122

5.613 ± 0.2

7.394 ± 0.123

1.429 ± 0.045

4.627 ± 0.125
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski