Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175)

Taxonomy: cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum; Sulfurospirillum deleyianum

Average proteome isoelectric point is 6.48

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2243 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D1AYY0|D1AYY0_SULD5 Sulfatase OS=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) OX=525898 GN=Sdel_0080 PE=4 SV=1
MM1 pKa = 7.61NSSLYY6 pKa = 10.85NGVSGIKK13 pKa = 9.35TSQFYY18 pKa = 10.73IDD20 pKa = 4.3VIGNNISNVNTNGFKK35 pKa = 10.85GSTPEE40 pKa = 3.86VSSLFSSILVGTYY53 pKa = 9.85NSYY56 pKa = 11.54SNGVGMGAQSFNTALDD72 pKa = 3.55MSQGILEE79 pKa = 4.34NTDD82 pKa = 3.01NTFDD86 pKa = 4.16LALGSEE92 pKa = 4.56GWFGVQGADD101 pKa = 2.8GNTYY105 pKa = 7.16YY106 pKa = 10.54TRR108 pKa = 11.84AGSFSLDD115 pKa = 3.27AEE117 pKa = 4.7GNLVDD122 pKa = 5.15GDD124 pKa = 4.36GNYY127 pKa = 11.0LLATLGNNIATTTLDD142 pKa = 3.66ADD144 pKa = 3.95TLAKK148 pKa = 10.37FGQYY152 pKa = 10.3YY153 pKa = 10.92NNGTASSVTPYY164 pKa = 10.94AITEE168 pKa = 4.23LNDD171 pKa = 3.11VGLGTIGSQGIVNLPKK187 pKa = 9.51TLYY190 pKa = 8.69YY191 pKa = 10.09PPVASSEE198 pKa = 3.93ASYY201 pKa = 11.01SANLDD206 pKa = 3.35PTITTDD212 pKa = 5.41AVTLDD217 pKa = 4.74LNSADD222 pKa = 3.96YY223 pKa = 9.79PSSVLADD230 pKa = 3.74TTSKK234 pKa = 9.67TLTLNGTITNTITTQTPQKK253 pKa = 10.73GDD255 pKa = 3.34IVDD258 pKa = 3.77VTLKK262 pKa = 10.66DD263 pKa = 3.65ASGKK267 pKa = 8.11TLLLTATLDD276 pKa = 3.91EE277 pKa = 4.21NLEE280 pKa = 4.1WSINDD285 pKa = 3.68YY286 pKa = 11.07DD287 pKa = 4.06VSAYY291 pKa = 10.3DD292 pKa = 3.64LSSAFTLTSAKK303 pKa = 10.3LQTEE307 pKa = 4.33QEE309 pKa = 4.4VATQEE314 pKa = 4.0NFSTSIIGPDD324 pKa = 3.54GDD326 pKa = 5.17KK327 pKa = 11.03DD328 pKa = 3.61ILDD331 pKa = 3.47MTFTKK336 pKa = 10.37VIPQTSTEE344 pKa = 4.41TTWNAVVNIYY354 pKa = 10.72SFYY357 pKa = 9.86EE358 pKa = 4.15TYY360 pKa = 9.06DD361 pKa = 3.14TSKK364 pKa = 9.89TYY366 pKa = 9.19DD367 pKa = 3.13TTQYY371 pKa = 11.17YY372 pKa = 9.72IDD374 pKa = 3.4KK375 pKa = 8.97TANKK379 pKa = 9.42VYY381 pKa = 10.37EE382 pKa = 4.26IVDD385 pKa = 3.93TQTGALTFNGNGSLASNTIPTINNGGTTLTLNLGTVGGYY424 pKa = 10.78DD425 pKa = 3.68GMVSNANIDD434 pKa = 3.53KK435 pKa = 11.15ANASSSNGTLEE446 pKa = 4.47GFLTGYY452 pKa = 10.71DD453 pKa = 3.02VDD455 pKa = 4.15TNGNVIASFSNGKK468 pKa = 9.52SSSVAKK474 pKa = 9.78IAVYY478 pKa = 10.2HH479 pKa = 5.7FQNDD483 pKa = 3.25QGLMAEE489 pKa = 4.26SSNLFSEE496 pKa = 4.69SSNSGKK502 pKa = 10.57AFFYY506 pKa = 10.52ADD508 pKa = 3.4EE509 pKa = 4.67SGEE512 pKa = 4.2SFLGSKK518 pKa = 10.17VYY520 pKa = 9.49SHH522 pKa = 7.12KK523 pKa = 11.23LEE525 pKa = 4.27GSNVSLATALTEE537 pKa = 4.69LIIVQKK543 pKa = 11.07AFDD546 pKa = 4.07ASAKK550 pKa = 10.62SITTSDD556 pKa = 3.77EE557 pKa = 3.98LLKK560 pKa = 11.04NAINMKK566 pKa = 10.28AA567 pKa = 3.07

Molecular weight: 60.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D1B2Y5|D1B2Y5_SULD5 Uncharacterized protein OS=Sulfurospirillum deleyianum (strain ATCC 51133 / DSM 6946 / 5175) OX=525898 GN=Sdel_1437 PE=4 SV=1
MM1 pKa = 7.28KK2 pKa = 9.39RR3 pKa = 11.84TYY5 pKa = 10.1QPHH8 pKa = 4.92TTPKK12 pKa = 10.24KK13 pKa = 7.56RR14 pKa = 11.84THH16 pKa = 6.02GFRR19 pKa = 11.84LRR21 pKa = 11.84MKK23 pKa = 9.27TKK25 pKa = 10.31GGRR28 pKa = 11.84KK29 pKa = 9.04VIAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.08GRR39 pKa = 11.84RR40 pKa = 11.84RR41 pKa = 11.84LAAA44 pKa = 4.25

Molecular weight: 5.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2243

0

2243

701989

32

4798

313.0

35.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.492 ± 0.056

1.07 ± 0.023

4.945 ± 0.061

7.338 ± 0.05

5.047 ± 0.044

6.174 ± 0.064

2.379 ± 0.029

7.654 ± 0.045

7.603 ± 0.061

10.438 ± 0.061

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.776 ± 0.029

4.431 ± 0.049

3.189 ± 0.036

3.172 ± 0.031

3.618 ± 0.035

6.556 ± 0.044

5.153 ± 0.051

6.457 ± 0.043

0.784 ± 0.019

3.723 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski