Streptococcus phage Javan349

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.41

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 49 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D6A8J6|A0A4D6A8J6_9CAUD Uncharacterized protein OS=Streptococcus phage Javan349 OX=2548119 GN=Javan349_0034 PE=4 SV=1
MM1 pKa = 7.61SYY3 pKa = 11.05DD4 pKa = 3.95LEE6 pKa = 4.43ILGKK10 pKa = 9.83IEE12 pKa = 3.96SGQYY16 pKa = 9.97ICIDD20 pKa = 3.51EE21 pKa = 4.67PKK23 pKa = 10.37YY24 pKa = 10.99SSPTYY29 pKa = 10.74NLGKK33 pKa = 9.1MFRR36 pKa = 11.84VAMDD40 pKa = 3.16WDD42 pKa = 4.41FDD44 pKa = 3.41QGTIYY49 pKa = 10.78NIADD53 pKa = 3.09IFEE56 pKa = 4.69NIQRR60 pKa = 11.84GISEE64 pKa = 4.49LEE66 pKa = 3.95QYY68 pKa = 9.17PEE70 pKa = 4.81KK71 pKa = 10.64YY72 pKa = 9.59VQYY75 pKa = 10.66EE76 pKa = 4.03PANKK80 pKa = 9.13WGTVSSALEE89 pKa = 4.03DD90 pKa = 3.6LRR92 pKa = 11.84SLRR95 pKa = 11.84DD96 pKa = 3.75CILGQDD102 pKa = 3.23IDD104 pKa = 3.94TKK106 pKa = 10.54YY107 pKa = 11.13LYY109 pKa = 10.61VRR111 pKa = 11.84WW112 pKa = 3.86

Molecular weight: 13.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D6AC19|A0A4D6AC19_9CAUD Mobile element protein OS=Streptococcus phage Javan349 OX=2548119 GN=Javan349_0027 PE=3 SV=1
MM1 pKa = 7.62SSGAEE6 pKa = 3.59LRR8 pKa = 11.84GFDD11 pKa = 3.96DD12 pKa = 3.31VLRR15 pKa = 11.84NIEE18 pKa = 3.98VRR20 pKa = 11.84LGNNKK25 pKa = 8.78VKK27 pKa = 10.63RR28 pKa = 11.84ATSRR32 pKa = 11.84ALKK35 pKa = 10.36AVANEE40 pKa = 3.87TLEE43 pKa = 4.15EE44 pKa = 4.1FKK46 pKa = 11.18GALQVYY52 pKa = 9.16KK53 pKa = 10.12DD54 pKa = 3.43TGEE57 pKa = 4.35TIEE60 pKa = 4.32SATAGRR66 pKa = 11.84VTGLASGVPVVKK78 pKa = 10.19IGFGEE83 pKa = 4.76GSRR86 pKa = 11.84WRR88 pKa = 11.84LVHH91 pKa = 6.68LNEE94 pKa = 4.47FGYY97 pKa = 10.93GKK99 pKa = 9.95NPHH102 pKa = 6.4PRR104 pKa = 11.84GFGVIRR110 pKa = 11.84RR111 pKa = 11.84FSEE114 pKa = 4.0AHH116 pKa = 5.54AKK118 pKa = 7.8TYY120 pKa = 9.96KK121 pKa = 10.43YY122 pKa = 10.32RR123 pKa = 11.84VASHH127 pKa = 6.35LKK129 pKa = 10.01IGGFF133 pKa = 3.68

Molecular weight: 14.58 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

49

0

49

11633

37

1422

237.4

26.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.714 ± 0.674

0.576 ± 0.122

6.112 ± 0.313

7.462 ± 0.336

4.504 ± 0.341

6.542 ± 0.33

1.53 ± 0.143

6.696 ± 0.295

8.588 ± 0.419

8.192 ± 0.362

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.493 ± 0.201

5.751 ± 0.291

2.828 ± 0.199

3.705 ± 0.191

4.479 ± 0.315

6.585 ± 0.364

6.232 ± 0.457

6.052 ± 0.248

1.264 ± 0.151

3.696 ± 0.297
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski