Tessaracoccus flavescens

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Tessaracoccus

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3222 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Q2CV15|A0A1Q2CV15_9ACTN 30S ribosomal protein S13 OS=Tessaracoccus flavescens OX=399497 GN=rpsM PE=3 SV=1
MM1 pKa = 7.35RR2 pKa = 11.84TLLIATASLATLIAAGACTADD23 pKa = 3.69QPAPGPQPASTSAAAVDD40 pKa = 3.67VDD42 pKa = 5.6DD43 pKa = 6.68FLAQHH48 pKa = 6.81DD49 pKa = 3.95LAGRR53 pKa = 11.84SVTEE57 pKa = 3.67IVEE60 pKa = 4.32ALDD63 pKa = 3.49GTNEE67 pKa = 3.79DD68 pKa = 4.73RR69 pKa = 11.84EE70 pKa = 4.2NGPYY74 pKa = 10.68GSVLPGEE81 pKa = 5.41LILADD86 pKa = 3.94EE87 pKa = 4.77KK88 pKa = 11.18QQVSLPIEE96 pKa = 4.03DD97 pKa = 4.3AFYY100 pKa = 11.17LSVAPYY106 pKa = 8.7VTGTHH111 pKa = 5.42EE112 pKa = 4.6CYY114 pKa = 10.49NHH116 pKa = 6.44NLASCQGEE124 pKa = 4.11LAQQEE129 pKa = 4.2FDD131 pKa = 3.57VTIVGEE137 pKa = 4.26DD138 pKa = 3.38GQEE141 pKa = 3.86IFDD144 pKa = 4.26GQVTTAPNGFAGFWLPKK161 pKa = 9.92EE162 pKa = 3.78ITATVTVEE170 pKa = 3.65HH171 pKa = 7.49DD172 pKa = 3.11GRR174 pKa = 11.84TATTEE179 pKa = 3.94VSTGAEE185 pKa = 4.41DD186 pKa = 3.82PTCITTMQLAA196 pKa = 3.65

Molecular weight: 20.56 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Q2CW34|A0A1Q2CW34_9ACTN Uncharacterized protein OS=Tessaracoccus flavescens OX=399497 GN=BW733_05200 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.99KK16 pKa = 9.72HH17 pKa = 5.74RR18 pKa = 11.84KK19 pKa = 7.87LLKK22 pKa = 8.37RR23 pKa = 11.84TRR25 pKa = 11.84IQRR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84AGKK33 pKa = 9.79

Molecular weight: 4.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3222

0

3222

1009990

33

2120

313.5

33.83

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.299 ± 0.052

0.706 ± 0.012

6.284 ± 0.034

6.102 ± 0.045

3.011 ± 0.024

8.734 ± 0.04

2.026 ± 0.023

4.339 ± 0.033

2.483 ± 0.032

10.151 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.018 ± 0.018

2.171 ± 0.025

5.387 ± 0.034

3.091 ± 0.023

7.306 ± 0.055

5.676 ± 0.03

6.039 ± 0.05

8.576 ± 0.037

1.588 ± 0.019

2.013 ± 0.021
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski