Agrilactobacillus composti DSM 18527 = JCM 14202

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Agrilactobacillus; Agrilactobacillus composti

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3260 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R1Y2M9|A0A0R1Y2M9_9LACO Glycosyl transferase 2 family protein OS=Agrilactobacillus composti DSM 18527 = JCM 14202 OX=1423734 GN=FC83_GL003004 PE=4 SV=1
MM1 pKa = 7.6ASVKK5 pKa = 10.23IIEE8 pKa = 4.35TSVASGNTGGDD19 pKa = 3.38MYY21 pKa = 11.1DD22 pKa = 4.02SPNGTYY28 pKa = 10.06IKK30 pKa = 10.73ALALNTDD37 pKa = 2.96WEE39 pKa = 4.54YY40 pKa = 11.73FDD42 pKa = 3.89TQTVDD47 pKa = 3.12GQIWYY52 pKa = 9.58DD53 pKa = 3.49LGGDD57 pKa = 3.38QWISEE62 pKa = 4.37IYY64 pKa = 10.0AAPNINDD71 pKa = 3.69LEE73 pKa = 4.45VRR75 pKa = 11.84SGTAKK80 pKa = 10.59VADD83 pKa = 3.98FTTATVYY90 pKa = 10.19YY91 pKa = 9.85SPNGSEE97 pKa = 4.0NTQDD101 pKa = 3.67NPTPLPEE108 pKa = 4.22NSEE111 pKa = 3.8WAYY114 pKa = 11.48NKK116 pKa = 10.4AATDD120 pKa = 3.67SEE122 pKa = 4.39GTIWFDD128 pKa = 3.06VGRR131 pKa = 11.84SQWVTTQEE139 pKa = 4.44VVDD142 pKa = 4.36EE143 pKa = 4.57DD144 pKa = 3.83AGGDD148 pKa = 3.91IEE150 pKa = 4.48WSGSGIFQYY159 pKa = 8.49PTYY162 pKa = 10.89SDD164 pKa = 3.42GGINADD170 pKa = 4.68MIRR173 pKa = 11.84QAASDD178 pKa = 4.06MYY180 pKa = 10.84TSVSDD185 pKa = 3.91DD186 pKa = 3.67QINTIMAVAEE196 pKa = 4.3HH197 pKa = 6.69EE198 pKa = 4.57SGNNSNKK205 pKa = 9.26INNWDD210 pKa = 3.41KK211 pKa = 10.94NAQEE215 pKa = 4.12GHH217 pKa = 6.38PSKK220 pKa = 11.03GVLQFVGYY228 pKa = 8.27TFDD231 pKa = 3.86HH232 pKa = 5.7YY233 pKa = 11.17HH234 pKa = 5.87VANHH238 pKa = 6.33DD239 pKa = 4.62NIWSSMDD246 pKa = 3.15QLYY249 pKa = 11.26ALFNDD254 pKa = 4.11ATWASDD260 pKa = 2.83ISLGGWAPNGPVRR273 pKa = 11.84FPAA276 pKa = 4.36

Molecular weight: 30.33 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|X0QHW8|X0QHW8_9LACO Uncharacterized protein OS=Agrilactobacillus composti DSM 18527 = JCM 14202 OX=1423734 GN=FC83_GL001830 PE=4 SV=1
MM1 pKa = 7.2FHH3 pKa = 7.3LIWVLIIGALIGVIAGAITSRR24 pKa = 11.84GMPFGWIGNILAGLIGAWLGQRR46 pKa = 11.84LLGTWGPSLAGMALIPAIIGAIILVLVVSLILGATTKK83 pKa = 10.41RR84 pKa = 11.84RR85 pKa = 11.84AA86 pKa = 3.17

Molecular weight: 8.9 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3260

0

3260

1004349

49

1815

308.1

34.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.184 ± 0.047

0.534 ± 0.012

5.667 ± 0.043

4.379 ± 0.036

4.356 ± 0.038

6.881 ± 0.035

2.124 ± 0.02

7.004 ± 0.041

5.849 ± 0.037

10.307 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.505 ± 0.021

4.591 ± 0.033

4.046 ± 0.029

5.268 ± 0.046

3.754 ± 0.031

5.379 ± 0.037

6.59 ± 0.048

6.969 ± 0.032

1.062 ± 0.017

3.539 ± 0.025
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski