Bombyx mori cytoplasmic polyhedrosis virus (BmCPV)

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Spinareovirinae; Cypovirus; Cypovirus 1

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C7EWL8|C7EWL8_CPVBM p101 OS=Bombyx mori cytoplasmic polyhedrosis virus OX=110829 PE=4 SV=1
MM1 pKa = 6.17TTKK4 pKa = 10.63LFKK7 pKa = 9.87QTIIPTNKK15 pKa = 10.21DD16 pKa = 2.58VDD18 pKa = 3.49EE19 pKa = 4.94KK20 pKa = 11.12YY21 pKa = 10.44IYY23 pKa = 10.45FIEE26 pKa = 4.53RR27 pKa = 11.84ADD29 pKa = 3.61HH30 pKa = 6.96KK31 pKa = 10.38IIKK34 pKa = 8.48PLHH37 pKa = 6.06PAFEE41 pKa = 4.43PWQFAGNQHH50 pKa = 5.55AHH52 pKa = 5.34QLEE55 pKa = 3.91QGYY58 pKa = 11.15ADD60 pKa = 3.18GHH62 pKa = 5.75RR63 pKa = 11.84FITNYY68 pKa = 10.55NATSRR73 pKa = 11.84LNSAMTLQIMNKK85 pKa = 9.51PMITIVKK92 pKa = 9.74KK93 pKa = 8.79FTTNTPHH100 pKa = 6.4QVTTIPEE107 pKa = 4.8GYY109 pKa = 9.63SFGVVKK115 pKa = 10.68EE116 pKa = 4.08KK117 pKa = 11.13LCTNEE122 pKa = 3.78QLLSLLALTAEE133 pKa = 4.29PVIEE137 pKa = 4.67NDD139 pKa = 3.93GEE141 pKa = 4.45VNDD144 pKa = 5.21TIQEE148 pKa = 4.13DD149 pKa = 3.83EE150 pKa = 4.4TEE152 pKa = 4.16KK153 pKa = 11.2KK154 pKa = 9.42EE155 pKa = 4.49VEE157 pKa = 3.95MRR159 pKa = 11.84MNWSDD164 pKa = 3.84EE165 pKa = 4.1VVEE168 pKa = 4.62LPKK171 pKa = 10.46QQEE174 pKa = 4.06EE175 pKa = 4.62NVFVLSKK182 pKa = 10.5PSMISEE188 pKa = 4.29EE189 pKa = 4.16EE190 pKa = 4.03LMPIDD195 pKa = 4.33MEE197 pKa = 4.49VMTPKK202 pKa = 10.31VLEE205 pKa = 4.68PPTPLPSPIVVAVSSEE221 pKa = 4.13SPQVKK226 pKa = 9.91EE227 pKa = 4.49IEE229 pKa = 4.42RR230 pKa = 11.84LPADD234 pKa = 4.26LPQEE238 pKa = 4.01QRR240 pKa = 11.84VSRR243 pKa = 11.84KK244 pKa = 8.93PVARR248 pKa = 11.84TTKK251 pKa = 9.8PSFSSFSSPDD261 pKa = 2.97IVSANVQTPVPKK273 pKa = 9.97VAPRR277 pKa = 11.84PVEE280 pKa = 3.94EE281 pKa = 4.35FLSSVFTSLFEE292 pKa = 3.92AWFVRR297 pKa = 11.84VLPLIKK303 pKa = 9.9QGKK306 pKa = 6.86PVYY309 pKa = 9.73MMPGTIKK316 pKa = 10.19WEE318 pKa = 4.08RR319 pKa = 11.84EE320 pKa = 3.79AQITDD325 pKa = 3.01TKK327 pKa = 10.21TRR329 pKa = 11.84YY330 pKa = 9.34FNSVSGKK337 pKa = 10.14LILVEE342 pKa = 4.14MEE344 pKa = 4.35SITRR348 pKa = 11.84ALQPGEE354 pKa = 4.0LNDD357 pKa = 3.47RR358 pKa = 11.84RR359 pKa = 11.84EE360 pKa = 4.77LIRR363 pKa = 11.84QTLEE367 pKa = 4.13TVCAGHH373 pKa = 6.79NIHH376 pKa = 6.6VLTGKK381 pKa = 8.76DD382 pKa = 3.05TFGVLEE388 pKa = 4.36VEE390 pKa = 4.51

Molecular weight: 44.27 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D0EZK6|D0EZK6_CPVBM RNA-dependent RNA polymerase OS=Bombyx mori cytoplasmic polyhedrosis virus OX=110829 PE=1 SV=1
MM1 pKa = 7.39FAIDD5 pKa = 4.05PLKK8 pKa = 10.53HH9 pKa = 5.65SKK11 pKa = 10.57LYY13 pKa = 10.59EE14 pKa = 4.03EE15 pKa = 4.63YY16 pKa = 10.94GLYY19 pKa = 10.45LRR21 pKa = 11.84PHH23 pKa = 6.9QINQEE28 pKa = 3.99IKK30 pKa = 8.54PTTIKK35 pKa = 10.54KK36 pKa = 10.23KK37 pKa = 10.17EE38 pKa = 3.85LAPTIRR44 pKa = 11.84SIKK47 pKa = 8.95YY48 pKa = 9.15ASLIHH53 pKa = 7.22SMLAEE58 pKa = 3.8HH59 pKa = 7.52AARR62 pKa = 11.84HH63 pKa = 5.84NGTLINPRR71 pKa = 11.84MYY73 pKa = 11.37ADD75 pKa = 5.11MITLGNTKK83 pKa = 8.74VTVTKK88 pKa = 8.63GTPKK92 pKa = 10.7AQIDD96 pKa = 3.92TLKK99 pKa = 10.59MNGLTVVSKK108 pKa = 10.56SRR110 pKa = 11.84RR111 pKa = 11.84NNKK114 pKa = 9.1KK115 pKa = 10.34KK116 pKa = 10.17PVSDD120 pKa = 3.47TTATIDD126 pKa = 3.48EE127 pKa = 4.35NTNAIVTYY135 pKa = 10.29KK136 pKa = 10.83ALTEE140 pKa = 3.92MSTLIEE146 pKa = 4.27SFRR149 pKa = 11.84LPSGLTLIIFDD160 pKa = 3.97DD161 pKa = 4.06EE162 pKa = 5.1KK163 pKa = 10.96YY164 pKa = 10.59QSLIPNYY171 pKa = 8.93INQLIAYY178 pKa = 5.86TQPHH182 pKa = 7.71IIPTWQGIADD192 pKa = 4.32FSDD195 pKa = 3.56TYY197 pKa = 10.93LRR199 pKa = 11.84SYY201 pKa = 10.09FKK203 pKa = 10.89RR204 pKa = 11.84PFEE207 pKa = 4.06LTASNLAAPQKK218 pKa = 10.75HH219 pKa = 5.88NLSPMTRR226 pKa = 11.84SIFNNTGRR234 pKa = 11.84EE235 pKa = 3.82DD236 pKa = 3.4AVIRR240 pKa = 11.84KK241 pKa = 9.45LYY243 pKa = 10.72GYY245 pKa = 10.27GEE247 pKa = 4.44YY248 pKa = 11.12VFIKK252 pKa = 11.0YY253 pKa = 8.71EE254 pKa = 4.09GCLITWTGIYY264 pKa = 10.78GEE266 pKa = 4.2VTMMVNLSKK275 pKa = 10.66RR276 pKa = 11.84DD277 pKa = 3.55LGLDD281 pKa = 3.25VGDD284 pKa = 5.72DD285 pKa = 3.58YY286 pKa = 11.97LKK288 pKa = 10.45EE289 pKa = 4.1YY290 pKa = 10.77KK291 pKa = 10.13KK292 pKa = 10.91LLFYY296 pKa = 10.92GVITDD301 pKa = 5.76AIPSGISTRR310 pKa = 11.84STIMKK315 pKa = 9.91ISPHH319 pKa = 7.59KK320 pKa = 10.14MMNPSGGALAVLSKK334 pKa = 10.58FLEE337 pKa = 4.48AVVSTNVINATLVVYY352 pKa = 10.51AEE354 pKa = 4.34KK355 pKa = 10.85GAGKK359 pKa = 8.68TSFLSTYY366 pKa = 10.93AEE368 pKa = 4.08QLSLASGQVVGHH380 pKa = 6.99LSSDD384 pKa = 3.14AYY386 pKa = 10.61GRR388 pKa = 11.84WLAKK392 pKa = 9.89TKK394 pKa = 10.46DD395 pKa = 3.21IEE397 pKa = 4.52EE398 pKa = 4.17PSFAYY403 pKa = 10.15DD404 pKa = 3.46YY405 pKa = 11.4VLSLDD410 pKa = 3.57TDD412 pKa = 4.2DD413 pKa = 4.63NEE415 pKa = 4.92SYY417 pKa = 10.91YY418 pKa = 9.29EE419 pKa = 4.04QKK421 pKa = 10.93ASEE424 pKa = 4.65LLMSHH429 pKa = 7.16GISEE433 pKa = 4.36VAQYY437 pKa = 11.15EE438 pKa = 4.28LLSVRR443 pKa = 11.84KK444 pKa = 8.85KK445 pKa = 10.38IKK447 pKa = 10.4MMDD450 pKa = 3.36EE451 pKa = 4.0MNEE454 pKa = 3.76VLIAQLEE461 pKa = 4.3NADD464 pKa = 3.67THH466 pKa = 6.13SEE468 pKa = 4.04RR469 pKa = 11.84NFYY472 pKa = 11.58YY473 pKa = 9.9MVSTGKK479 pKa = 6.19TTPRR483 pKa = 11.84ILIVEE488 pKa = 4.06GHH490 pKa = 6.41FNAQDD495 pKa = 3.26ATIARR500 pKa = 11.84TDD502 pKa = 3.41TTVLLRR508 pKa = 11.84TINDD512 pKa = 3.35TTQAMRR518 pKa = 11.84DD519 pKa = 3.56RR520 pKa = 11.84QRR522 pKa = 11.84GGVVQLFLRR531 pKa = 11.84DD532 pKa = 3.14TYY534 pKa = 11.61YY535 pKa = 11.31RR536 pKa = 11.84LLPALHH542 pKa = 5.25TTVYY546 pKa = 8.96PFEE549 pKa = 4.09MLEE552 pKa = 4.54SIKK555 pKa = 10.15RR556 pKa = 11.84WKK558 pKa = 8.44WVHH561 pKa = 5.43

Molecular weight: 63.57 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11

0

11

8294

248

1333

754.0

85.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.86 ± 0.476

0.699 ± 0.177

5.836 ± 0.22

5.45 ± 0.318

3.786 ± 0.208

4.702 ± 0.253

2.64 ± 0.119

6.788 ± 0.264

4.292 ± 0.404

8.934 ± 0.387

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.894 ± 0.19

5.619 ± 0.242

4.365 ± 0.364

3.81 ± 0.2

6.004 ± 0.273

7.801 ± 0.322

7.403 ± 0.395

6.933 ± 0.353

0.796 ± 0.088

4.389 ± 0.363
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski