Tapara virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Phenuiviridae; Phlebovirus; Tapara phlebovirus

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1S5SHW6|A0A1S5SHW6_9VIRU Nonstructural protein OS=Tapara virus OX=1926501 PE=4 SV=1
MM1 pKa = 7.82SSYY4 pKa = 10.97LYY6 pKa = 10.12DD7 pKa = 3.65RR8 pKa = 11.84PIIFRR13 pKa = 11.84QSQEE17 pKa = 4.12DD18 pKa = 4.13CSVQYY23 pKa = 11.02LAFNSFTDD31 pKa = 4.7RR32 pKa = 11.84EE33 pKa = 4.51VCVNNDD39 pKa = 2.96MEE41 pKa = 4.93IPVEE45 pKa = 4.32NYY47 pKa = 7.4MASCAFRR54 pKa = 11.84EE55 pKa = 4.26SLQDD59 pKa = 3.71FYY61 pKa = 11.6RR62 pKa = 11.84AGTLPLKK69 pKa = 10.08WGDD72 pKa = 3.57EE73 pKa = 4.24MPVNRR78 pKa = 11.84VTKK81 pKa = 10.32GSYY84 pKa = 10.25RR85 pKa = 11.84LMDD88 pKa = 3.66GVIEE92 pKa = 4.17SLSRR96 pKa = 11.84FSRR99 pKa = 11.84EE100 pKa = 4.31DD101 pKa = 3.05IIKK104 pKa = 10.35SYY106 pKa = 10.73LPNVQNALSWPLGYY120 pKa = 7.68PTLDD124 pKa = 3.91FIKK127 pKa = 10.19ACVMDD132 pKa = 3.87TPLYY136 pKa = 8.61TRR138 pKa = 11.84KK139 pKa = 8.48STHH142 pKa = 5.38ATLIFRR148 pKa = 11.84TGQPADD154 pKa = 4.17CLDD157 pKa = 3.4QSFVNSHH164 pKa = 5.49RR165 pKa = 11.84RR166 pKa = 11.84IVMEE170 pKa = 3.88SVTRR174 pKa = 11.84GFDD177 pKa = 3.09VKK179 pKa = 10.3TFTGQNLVRR188 pKa = 11.84DD189 pKa = 4.14IASLQCVRR197 pKa = 11.84VLNAYY202 pKa = 9.45QADD205 pKa = 4.03LLYY208 pKa = 10.93CGVSTEE214 pKa = 4.18LTKK217 pKa = 10.67EE218 pKa = 3.9LSKK221 pKa = 11.06LRR223 pKa = 11.84IIHH226 pKa = 7.12DD227 pKa = 3.64GHH229 pKa = 6.42PQNPLGNQRR238 pKa = 11.84WIASPDD244 pKa = 3.02SWDD247 pKa = 3.45YY248 pKa = 11.41RR249 pKa = 11.84PNPDD253 pKa = 3.78VEE255 pKa = 5.23LDD257 pKa = 3.46FDD259 pKa = 5.65LDD261 pKa = 3.62ISDD264 pKa = 4.13SSEE267 pKa = 4.12DD268 pKa = 3.59EE269 pKa = 4.07

Molecular weight: 30.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1S5SHW6|A0A1S5SHW6_9VIRU Nonstructural protein OS=Tapara virus OX=1926501 PE=4 SV=1
MM1 pKa = 7.85SDD3 pKa = 3.66YY4 pKa = 10.91EE5 pKa = 4.1KK6 pKa = 11.01LAIEE10 pKa = 4.28LQGEE14 pKa = 4.54PIDD17 pKa = 4.04KK18 pKa = 10.55NAIQRR23 pKa = 11.84WMSEE27 pKa = 3.61FAYY30 pKa = 10.28EE31 pKa = 4.76GFDD34 pKa = 3.17AANIVKK40 pKa = 10.08LVHH43 pKa = 6.01EE44 pKa = 4.37RR45 pKa = 11.84AKK47 pKa = 10.89AAGRR51 pKa = 11.84DD52 pKa = 3.13WKK54 pKa = 11.16LDD56 pKa = 3.6VKK58 pKa = 11.23KK59 pKa = 10.36MIVLALTRR67 pKa = 11.84GNKK70 pKa = 7.3VDD72 pKa = 4.16KK73 pKa = 9.79MIKK76 pKa = 10.1KK77 pKa = 9.36MSEE80 pKa = 3.39KK81 pKa = 10.4GAATVTEE88 pKa = 4.22LVRR91 pKa = 11.84VYY93 pKa = 10.58SLKK96 pKa = 10.82SGNPTRR102 pKa = 11.84DD103 pKa = 3.59DD104 pKa = 3.55LTLSRR109 pKa = 11.84VAAAFAGYY117 pKa = 7.77TCQALPHH124 pKa = 6.35LAEE127 pKa = 5.64AIPVSGSQMDD137 pKa = 4.08EE138 pKa = 3.94VVKK141 pKa = 10.78NYY143 pKa = 7.42PRR145 pKa = 11.84PMMHH149 pKa = 7.17PAFSGLIDD157 pKa = 3.48PTFKK161 pKa = 11.22EE162 pKa = 4.13EE163 pKa = 4.39TKK165 pKa = 10.67DD166 pKa = 3.5ALINAHH172 pKa = 5.93SLFMYY177 pKa = 10.33HH178 pKa = 5.83FTVQINEE185 pKa = 3.93KK186 pKa = 9.66MRR188 pKa = 11.84GKK190 pKa = 9.96SDD192 pKa = 3.38KK193 pKa = 10.7EE194 pKa = 4.14IISSFQQPMYY204 pKa = 10.88AAINSGFMKK213 pKa = 10.74GEE215 pKa = 3.8TRR217 pKa = 11.84RR218 pKa = 11.84AMLRR222 pKa = 11.84TLGIVDD228 pKa = 4.38ANWVPSSIVQEE239 pKa = 3.63AAKK242 pKa = 10.01IYY244 pKa = 9.91KK245 pKa = 9.78EE246 pKa = 4.31KK247 pKa = 11.41YY248 pKa = 9.27NDD250 pKa = 3.2

Molecular weight: 28.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3951

250

2089

987.8

112.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.961 ± 0.835

2.455 ± 0.826

5.695 ± 0.637

7.669 ± 0.57

4.885 ± 0.365

5.669 ± 0.335

2.556 ± 0.247

6.96 ± 0.388

7.213 ± 0.731

8.226 ± 0.273

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.265 ± 0.361

3.872 ± 0.496

3.569 ± 0.394

2.784 ± 0.374

5.442 ± 0.313

9.415 ± 0.446

5.29 ± 0.474

5.897 ± 0.194

1.215 ± 0.06

2.961 ± 0.351
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski