Capybara microvirus Cap1_SP_94

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7N9|A0A4P8W7N9_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_94 OX=2584800 PE=4 SV=1
MM1 pKa = 7.49FFPFTSYY8 pKa = 11.27SPDD11 pKa = 3.27LSGSEE16 pKa = 4.01VLEE19 pKa = 4.07RR20 pKa = 11.84KK21 pKa = 9.69YY22 pKa = 11.09DD23 pKa = 3.9LQTMIDD29 pKa = 4.11PNNSTLVLHH38 pKa = 7.0RR39 pKa = 11.84GLLTDD44 pKa = 3.65VPISFNSQYY53 pKa = 10.85LPKK56 pKa = 10.62PEE58 pKa = 4.34DD59 pKa = 3.38TDD61 pKa = 4.9LAKK64 pKa = 10.4QLQNGSPLEE73 pKa = 4.7DD74 pKa = 3.65YY75 pKa = 10.99SGSRR79 pKa = 11.84PFNGAAHH86 pKa = 7.01HH87 pKa = 6.79IDD89 pKa = 3.73DD90 pKa = 4.37VSANTYY96 pKa = 9.08MDD98 pKa = 4.31EE99 pKa = 4.87LSKK102 pKa = 9.74TLQTSS107 pKa = 3.39

Molecular weight: 11.97 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W544|A0A4P8W544_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_94 OX=2584800 PE=4 SV=1
MM1 pKa = 7.73SICQNFKK8 pKa = 10.7HH9 pKa = 5.95IASRR13 pKa = 11.84SKK15 pKa = 10.69RR16 pKa = 11.84LRR18 pKa = 11.84ANLDD22 pKa = 3.01ALYY25 pKa = 11.27NKK27 pKa = 9.32VSCNKK32 pKa = 9.66CDD34 pKa = 3.08SCLAQNRR41 pKa = 11.84NDD43 pKa = 3.0WYY45 pKa = 10.1VRR47 pKa = 11.84ARR49 pKa = 11.84FEE51 pKa = 4.11MMQTLGLDD59 pKa = 3.45YY60 pKa = 10.82YY61 pKa = 10.73NNVVADD67 pKa = 3.97PGFILFPCLTYY78 pKa = 10.48IPTNRR83 pKa = 11.84PTLEE87 pKa = 4.29LLDD90 pKa = 5.37DD91 pKa = 4.32NSLPYY96 pKa = 10.41YY97 pKa = 10.66FEE99 pKa = 4.49GFSYY103 pKa = 10.59SHH105 pKa = 7.06IKK107 pKa = 10.34RR108 pKa = 11.84FLVEE112 pKa = 4.33LADD115 pKa = 3.82KK116 pKa = 9.98FQNRR120 pKa = 11.84YY121 pKa = 7.61HH122 pKa = 6.84TGTSCGVRR130 pKa = 11.84YY131 pKa = 8.46MVASEE136 pKa = 3.77YY137 pKa = 11.07GYY139 pKa = 11.27AEE141 pKa = 4.78EE142 pKa = 4.25YY143 pKa = 10.98LDD145 pKa = 5.34DD146 pKa = 5.04FGHH149 pKa = 6.37SRR151 pKa = 11.84IGQAAPHH158 pKa = 4.95YY159 pKa = 9.69HH160 pKa = 5.85VLLFFPSVAYY170 pKa = 10.23NDD172 pKa = 3.36KK173 pKa = 10.97DD174 pKa = 3.38YY175 pKa = 10.74WADD178 pKa = 3.39VVEE181 pKa = 4.65SLWSVTHH188 pKa = 4.55RR189 pKa = 11.84HH190 pKa = 5.57GRR192 pKa = 11.84VGWSKK197 pKa = 10.69KK198 pKa = 9.07HH199 pKa = 5.4GKK201 pKa = 9.44FVTSPLAIKK210 pKa = 9.16YY211 pKa = 5.33TTQYY215 pKa = 10.16CHH217 pKa = 6.53KK218 pKa = 9.46QHH220 pKa = 6.74SYY222 pKa = 7.52YY223 pKa = 10.24QRR225 pKa = 11.84PEE227 pKa = 3.64IEE229 pKa = 3.49KK230 pKa = 9.78WLYY233 pKa = 10.58QDD235 pKa = 3.29ITKK238 pKa = 8.14DD239 pKa = 3.52TPFHH243 pKa = 5.72VQHH246 pKa = 6.29EE247 pKa = 4.63LIKK250 pKa = 10.47EE251 pKa = 4.07RR252 pKa = 11.84EE253 pKa = 4.11KK254 pKa = 10.86QIHH257 pKa = 7.4DD258 pKa = 3.31ILPFHH263 pKa = 7.23RR264 pKa = 11.84EE265 pKa = 3.69SLHH268 pKa = 7.05FGEE271 pKa = 5.38CAVDD275 pKa = 4.0FLKK278 pKa = 11.04SLSSEE283 pKa = 3.9EE284 pKa = 4.15RR285 pKa = 11.84IKK287 pKa = 11.09LLSNGITFPDD297 pKa = 4.07DD298 pKa = 3.3FAADD302 pKa = 3.67GTLNHH307 pKa = 6.88YY308 pKa = 10.15ILPKK312 pKa = 10.23YY313 pKa = 10.33IYY315 pKa = 9.78DD316 pKa = 3.4KK317 pKa = 11.09LYY319 pKa = 10.58FVIEE323 pKa = 4.16NKK325 pKa = 10.42SVIEE329 pKa = 4.35DD330 pKa = 3.43GKK332 pKa = 11.02SVVKK336 pKa = 10.07PFVRR340 pKa = 11.84YY341 pKa = 9.92GSDD344 pKa = 3.27YY345 pKa = 11.65ALADD349 pKa = 3.35YY350 pKa = 7.5RR351 pKa = 11.84TLFRR355 pKa = 11.84YY356 pKa = 9.22NFNKK360 pKa = 10.11SRR362 pKa = 11.84FDD364 pKa = 3.72LEE366 pKa = 5.28RR367 pKa = 11.84ITSNLFLSQLDD378 pKa = 3.56KK379 pKa = 11.47EE380 pKa = 4.95LIEE383 pKa = 4.45KK384 pKa = 10.13LNKK387 pKa = 9.16RR388 pKa = 11.84DD389 pKa = 3.66YY390 pKa = 10.6VLQYY394 pKa = 10.17NYY396 pKa = 11.17ADD398 pKa = 3.56FRR400 pKa = 11.84HH401 pKa = 6.53FIDD404 pKa = 5.65DD405 pKa = 3.14IKK407 pKa = 11.32SRR409 pKa = 11.84YY410 pKa = 7.3TFDD413 pKa = 5.63RR414 pKa = 11.84ILSYY418 pKa = 10.96KK419 pKa = 10.3HH420 pKa = 6.13IVHH423 pKa = 6.71HH424 pKa = 6.63LFAFDD429 pKa = 3.95PLSYY433 pKa = 11.1SDD435 pKa = 4.92DD436 pKa = 3.57DD437 pKa = 4.52LYY439 pKa = 11.96NFVEE443 pKa = 5.13DD444 pKa = 3.44ISVNKK449 pKa = 10.13ILTKK453 pKa = 10.43RR454 pKa = 11.84FSSLDD459 pKa = 3.33KK460 pKa = 11.23YY461 pKa = 10.82EE462 pKa = 3.92LSIYY466 pKa = 10.29QKK468 pKa = 10.88LFSSYY473 pKa = 10.17NSPDD477 pKa = 2.91ISYY480 pKa = 10.9LDD482 pKa = 4.28GYY484 pKa = 10.75SCVRR488 pKa = 11.84NDD490 pKa = 3.89EE491 pKa = 4.17LDD493 pKa = 3.54EE494 pKa = 4.34FLSIIDD500 pKa = 4.24TIKK503 pKa = 10.62LHH505 pKa = 7.11ASVHH509 pKa = 5.53RR510 pKa = 11.84KK511 pKa = 8.77KK512 pKa = 10.8AYY514 pKa = 10.36DD515 pKa = 3.66LVCLQKK521 pKa = 10.3QAHH524 pKa = 7.17KK525 pKa = 10.57YY526 pKa = 9.84RR527 pKa = 11.84NLSKK531 pKa = 11.2YY532 pKa = 10.22ILL534 pKa = 3.91

Molecular weight: 63.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1658

107

668

414.5

47.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.514 ± 1.424

1.086 ± 0.392

7.057 ± 0.594

4.524 ± 0.944

5.127 ± 1.063

5.127 ± 0.766

2.473 ± 0.84

6.152 ± 0.562

5.489 ± 0.931

9.409 ± 0.742

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.87 ± 0.438

5.368 ± 0.439

3.739 ± 0.882

4.222 ± 0.559

4.584 ± 0.469

9.59 ± 0.631

5.79 ± 0.891

5.006 ± 0.245

1.086 ± 0.231

5.79 ± 1.067
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski