Bat paramyxovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; unclassified Paramyxoviridae

Average proteome isoelectric point is 6.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A346NTM2|A0A346NTM2_9MONO Matrix protein OS=Bat paramyxovirus OX=1300978 GN=M PE=4 SV=1
MM1 pKa = 7.34SRR3 pKa = 11.84VDD5 pKa = 3.85KK6 pKa = 11.23LSASVDD12 pKa = 3.19NGLAIAEE19 pKa = 4.73FIQEE23 pKa = 4.14NRR25 pKa = 11.84SSIQSTYY32 pKa = 9.5GRR34 pKa = 11.84SSIGEE39 pKa = 3.66PTIANRR45 pKa = 11.84AKK47 pKa = 10.42AWEE50 pKa = 4.3LYY52 pKa = 9.96IDD54 pKa = 3.71RR55 pKa = 11.84TNSRR59 pKa = 11.84NAGHH63 pKa = 6.45EE64 pKa = 4.39GKK66 pKa = 10.48LKK68 pKa = 10.69SINEE72 pKa = 3.98LPEE75 pKa = 4.44GKK77 pKa = 10.33GSEE80 pKa = 4.22TTRR83 pKa = 11.84VAEE86 pKa = 4.04TSEE89 pKa = 4.4IEE91 pKa = 4.63QSPKK95 pKa = 10.12NQNSSSGDD103 pKa = 3.23GSGDD107 pKa = 3.44FNFRR111 pKa = 11.84FPGDD115 pKa = 3.5SSEE118 pKa = 4.31SDD120 pKa = 2.72IGVWSKK126 pKa = 11.41NSSDD130 pKa = 3.58LSDD133 pKa = 3.47VEE135 pKa = 4.4GRR137 pKa = 11.84SISISEE143 pKa = 4.32GEE145 pKa = 4.42AEE147 pKa = 4.54PEE149 pKa = 4.09TSNDD153 pKa = 2.77VPSQVNEE160 pKa = 3.89SSRR163 pKa = 11.84DD164 pKa = 3.58HH165 pKa = 6.59ARR167 pKa = 11.84EE168 pKa = 3.91GADD171 pKa = 3.26QADD174 pKa = 4.08EE175 pKa = 4.2QVVSSNDD182 pKa = 3.25QEE184 pKa = 4.32TTTIIEE190 pKa = 4.34NPSKK194 pKa = 10.83EE195 pKa = 4.34SIASIMEE202 pKa = 3.93EE203 pKa = 4.09SGPMPKK209 pKa = 9.51RR210 pKa = 11.84RR211 pKa = 11.84LKK213 pKa = 9.35NASRR217 pKa = 11.84IKK219 pKa = 9.49EE220 pKa = 4.32TVDD223 pKa = 4.76AIPADD228 pKa = 3.77TPIVKK233 pKa = 8.68KK234 pKa = 7.56TTGEE238 pKa = 3.99NIQLQKK244 pKa = 10.3KK245 pKa = 6.43TDD247 pKa = 3.67KK248 pKa = 11.42LEE250 pKa = 4.31LSAGATQSAHH260 pKa = 7.28PSPQIQSSTNADD272 pKa = 2.59VDD274 pKa = 3.9TAQDD278 pKa = 3.38HH279 pKa = 4.18VHH281 pKa = 5.35YY282 pKa = 10.88AKK284 pKa = 8.46MTEE287 pKa = 4.12EE288 pKa = 4.04SHH290 pKa = 6.87PLSKK294 pKa = 10.01TDD296 pKa = 3.38TNQIALEE303 pKa = 4.17KK304 pKa = 10.48KK305 pKa = 9.88LDD307 pKa = 4.31KK308 pKa = 10.8ILEE311 pKa = 4.22NQEE314 pKa = 4.45KK315 pKa = 9.91ILKK318 pKa = 9.24KK319 pKa = 10.72LEE321 pKa = 3.9VLSEE325 pKa = 4.1VKK327 pKa = 10.84EE328 pKa = 3.89EE329 pKa = 3.84VNAIKK334 pKa = 9.21KK335 pKa = 7.37TLSNQSLALSTIEE348 pKa = 4.15NYY350 pKa = 9.67IGEE353 pKa = 4.37MMVIIPKK360 pKa = 10.31SGVPEE365 pKa = 4.37DD366 pKa = 4.17EE367 pKa = 4.49NNHH370 pKa = 6.65KK371 pKa = 8.75ITKK374 pKa = 10.19NPDD377 pKa = 2.86LRR379 pKa = 11.84PVIGRR384 pKa = 11.84DD385 pKa = 3.01STRR388 pKa = 11.84GKK390 pKa = 10.57KK391 pKa = 9.22EE392 pKa = 3.83VIRR395 pKa = 11.84PMTDD399 pKa = 2.83RR400 pKa = 11.84EE401 pKa = 4.21RR402 pKa = 11.84IDD404 pKa = 3.32IDD406 pKa = 3.43EE407 pKa = 4.84DD408 pKa = 4.64FYY410 pKa = 11.59NIPVVDD416 pKa = 3.8EE417 pKa = 4.69KK418 pKa = 11.74YY419 pKa = 10.11FVKK422 pKa = 10.6PINKK426 pKa = 9.14QEE428 pKa = 3.66NNAANFVPKK437 pKa = 9.9EE438 pKa = 4.14DD439 pKa = 3.51KK440 pKa = 9.86TSYY443 pKa = 10.54RR444 pKa = 11.84IIRR447 pKa = 11.84DD448 pKa = 3.83IIRR451 pKa = 11.84KK452 pKa = 7.2EE453 pKa = 4.09VKK455 pKa = 10.39DD456 pKa = 3.78PEE458 pKa = 4.49ARR460 pKa = 11.84DD461 pKa = 3.57AVIKK465 pKa = 10.41LFNDD469 pKa = 4.02SIGKK473 pKa = 9.28VPINEE478 pKa = 4.05IYY480 pKa = 10.67DD481 pKa = 4.48GIRR484 pKa = 11.84MLVYY488 pKa = 10.47TDD490 pKa = 4.09ILDD493 pKa = 4.23HH494 pKa = 6.94LEE496 pKa = 4.0KK497 pKa = 10.92

Molecular weight: 55.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A346NTM3|A0A346NTM3_9MONO Fusion glycoprotein F0 OS=Bat paramyxovirus OX=1300978 GN=F PE=3 SV=1
MM1 pKa = 7.41SGKK4 pKa = 10.4ADD6 pKa = 3.86FSKK9 pKa = 10.79RR10 pKa = 11.84SWEE13 pKa = 4.59DD14 pKa = 2.85GGTLQAIDD22 pKa = 3.5ATADD26 pKa = 3.3EE27 pKa = 4.94KK28 pKa = 11.46GRR30 pKa = 11.84LIPKK34 pKa = 9.41VRR36 pKa = 11.84VVNPGWNDD44 pKa = 3.34RR45 pKa = 11.84KK46 pKa = 9.51STGYY50 pKa = 10.5KK51 pKa = 9.41YY52 pKa = 10.69LIVYY56 pKa = 7.85GIIEE60 pKa = 4.57EE61 pKa = 4.29KK62 pKa = 10.76EE63 pKa = 3.76KK64 pKa = 11.34DD65 pKa = 3.48HH66 pKa = 5.87THH68 pKa = 5.77SAGGEE73 pKa = 3.93PTVRR77 pKa = 11.84KK78 pKa = 10.1SNAPRR83 pKa = 11.84AFGALPLGVGRR94 pKa = 11.84SHH96 pKa = 7.63VEE98 pKa = 3.78PEE100 pKa = 4.31DD101 pKa = 3.57LLEE104 pKa = 5.44AILKK108 pKa = 10.55LEE110 pKa = 3.69ITVRR114 pKa = 11.84RR115 pKa = 11.84TAGANEE121 pKa = 4.11KK122 pKa = 9.9IVYY125 pKa = 9.43GMSRR129 pKa = 11.84IDD131 pKa = 4.61NILKK135 pKa = 8.97PWAPILEE142 pKa = 4.44NGAIFPAIKK151 pKa = 9.89VCSNIDD157 pKa = 3.72IVPLDD162 pKa = 4.07HH163 pKa = 7.07PLKK166 pKa = 10.41LRR168 pKa = 11.84PIFLTITLLTDD179 pKa = 3.59AGIYY183 pKa = 9.3KK184 pKa = 9.8VPRR187 pKa = 11.84SILEE191 pKa = 3.66FRR193 pKa = 11.84QNKK196 pKa = 9.61AISFNLLVTLQVGSDD211 pKa = 3.73FTSSGVKK218 pKa = 10.56GMINEE223 pKa = 3.93NGEE226 pKa = 4.17RR227 pKa = 11.84VTTFMVHH234 pKa = 5.95IGNFVRR240 pKa = 11.84KK241 pKa = 9.36RR242 pKa = 11.84GKK244 pKa = 9.99AYY246 pKa = 10.54SIEE249 pKa = 4.12YY250 pKa = 10.29CKK252 pKa = 11.04AKK254 pKa = 9.77VDD256 pKa = 3.62KK257 pKa = 10.41MDD259 pKa = 3.27MRR261 pKa = 11.84FSLGAVGGLSFHH273 pKa = 6.22VRR275 pKa = 11.84IAGKK279 pKa = 9.07MSHH282 pKa = 5.92MLKK285 pKa = 10.42AQLGYY290 pKa = 10.63HH291 pKa = 5.19RR292 pKa = 11.84TICYY296 pKa = 10.83SLMDD300 pKa = 4.0TNPYY304 pKa = 9.59LNRR307 pKa = 11.84VMWRR311 pKa = 11.84SEE313 pKa = 3.75CSILKK318 pKa = 8.08VTAVFQPSVPKK329 pKa = 10.26EE330 pKa = 3.51FKK332 pKa = 10.41IYY334 pKa = 10.8DD335 pKa = 3.81DD336 pKa = 3.91VLIDD340 pKa = 3.61NTGKK344 pKa = 10.12ILKK347 pKa = 9.31QQ348 pKa = 3.23

Molecular weight: 38.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

5477

239

2195

684.6

77.84

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.076 ± 0.698

1.296 ± 0.288

6.08 ± 0.235

5.77 ± 0.592

3.834 ± 0.446

5.094 ± 0.666

1.917 ± 0.354

8.527 ± 0.438

6.865 ± 0.645

9.385 ± 0.778

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.666 ± 0.333

6.463 ± 0.455

3.944 ± 0.233

3.688 ± 0.306

5.185 ± 0.321

8.234 ± 0.57

5.879 ± 0.45

5.222 ± 0.353

1.15 ± 0.121

3.725 ± 0.431
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski