Streptococcus satellite phage Javan401

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 19 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZLN4|A0A4D5ZLN4_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan401 OX=2558680 GN=JavanS401_0016 PE=4 SV=1
MM1 pKa = 7.2KK2 pKa = 9.64TLSDD6 pKa = 3.59TPKK9 pKa = 9.76TFTFTTTLPNFEE21 pKa = 4.31QAQKK25 pKa = 10.83AGSALIGYY33 pKa = 7.56MVGTYY38 pKa = 7.06EE39 pKa = 4.84QSVIDD44 pKa = 3.34ITYY47 pKa = 9.06TGNGNLKK54 pKa = 10.56AEE56 pKa = 4.29YY57 pKa = 9.86TSDD60 pKa = 3.39EE61 pKa = 4.19DD62 pKa = 3.69LAEE65 pKa = 4.16SFEE68 pKa = 5.17RR69 pKa = 11.84ITNSLDD75 pKa = 3.16HH76 pKa = 6.92TDD78 pKa = 3.84DD79 pKa = 4.1FKK81 pKa = 11.46DD82 pKa = 3.86YY83 pKa = 11.57EE84 pKa = 4.37EE85 pKa = 5.91DD86 pKa = 3.77EE87 pKa = 4.42PTLKK91 pKa = 10.85GDD93 pKa = 3.89LDD95 pKa = 4.15TYY97 pKa = 9.8TALIGSFDD105 pKa = 3.91TLGQAQAFTEE115 pKa = 4.03NLDD118 pKa = 3.61YY119 pKa = 11.3EE120 pKa = 4.48LTKK123 pKa = 11.04GNNFIFEE130 pKa = 4.37QLPDD134 pKa = 3.68MVVLYY139 pKa = 8.61VSPQDD144 pKa = 3.68TIANSTIQKK153 pKa = 10.38LEE155 pKa = 3.71EE156 pKa = 4.37AYY158 pKa = 10.58VKK160 pKa = 10.78HH161 pKa = 5.69EE162 pKa = 4.52ADD164 pKa = 3.66YY165 pKa = 11.35KK166 pKa = 10.89PDD168 pKa = 3.63TFRR171 pKa = 11.84LNYY174 pKa = 9.8HH175 pKa = 6.4DD176 pKa = 3.95MRR178 pKa = 11.84VPQLQKK184 pKa = 10.54LDD186 pKa = 4.04KK187 pKa = 10.03DD188 pKa = 3.98TMISDD193 pKa = 4.27IILYY197 pKa = 9.73EE198 pKa = 4.7LEE200 pKa = 4.7LLDD203 pKa = 4.53HH204 pKa = 7.54ADD206 pKa = 3.89RR207 pKa = 11.84LLSDD211 pKa = 4.22EE212 pKa = 5.14PLPLDD217 pKa = 4.19DD218 pKa = 3.33QHH220 pKa = 8.96GYY222 pKa = 7.78EE223 pKa = 4.31TVEE226 pKa = 3.89LLGDD230 pKa = 3.78EE231 pKa = 5.28VIDD234 pKa = 4.6LVKK237 pKa = 10.95KK238 pKa = 10.86LDD240 pKa = 3.52TDD242 pKa = 3.62KK243 pKa = 11.31QFDD246 pKa = 4.55GIHH249 pKa = 7.15DD250 pKa = 4.28YY251 pKa = 10.98IIGGG255 pKa = 3.65

Molecular weight: 29.0 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZS17|A0A4D5ZS17_9VIRU Integrase OS=Streptococcus satellite phage Javan401 OX=2558680 GN=JavanS401_0019 PE=3 SV=1
MM1 pKa = 7.92KK2 pKa = 9.25ITEE5 pKa = 4.22YY6 pKa = 10.66KK7 pKa = 10.04KK8 pKa = 10.7KK9 pKa = 10.7NSTTVYY15 pKa = 9.95RR16 pKa = 11.84ANIYY20 pKa = 10.61LGVDD24 pKa = 3.91HH25 pKa = 7.01ITGKK29 pKa = 10.18KK30 pKa = 9.88VKK32 pKa = 9.57TSVTGRR38 pKa = 11.84TKK40 pKa = 10.69KK41 pKa = 9.61EE42 pKa = 3.43VKK44 pKa = 9.82IRR46 pKa = 11.84IKK48 pKa = 10.17EE49 pKa = 3.91AQHH52 pKa = 5.68NFKK55 pKa = 10.67TNGHH59 pKa = 5.51TVTKK63 pKa = 10.16AVPVEE68 pKa = 4.14NYY70 pKa = 10.2KK71 pKa = 10.55EE72 pKa = 4.15LAEE75 pKa = 4.41LWLKK79 pKa = 10.56SYY81 pKa = 11.07EE82 pKa = 4.18MTVKK86 pKa = 10.03PQTFIATKK94 pKa = 10.58RR95 pKa = 11.84MIHH98 pKa = 5.41NHH100 pKa = 7.26LIPVFGDD107 pKa = 3.04IKK109 pKa = 10.73LDD111 pKa = 3.65KK112 pKa = 10.92LSVSYY117 pKa = 10.61IQGHH121 pKa = 5.33INEE124 pKa = 4.31LSKK127 pKa = 11.19EE128 pKa = 4.14FVHH131 pKa = 7.02FGTVHH136 pKa = 6.64SINKK140 pKa = 9.37RR141 pKa = 11.84VLQYY145 pKa = 10.92GVSLQLIPFNPARR158 pKa = 11.84DD159 pKa = 3.83VILPKK164 pKa = 10.34AVKK167 pKa = 9.53PDD169 pKa = 3.09NKK171 pKa = 10.27AIKK174 pKa = 10.24FIDD177 pKa = 3.79YY178 pKa = 10.68DD179 pKa = 3.84DD180 pKa = 5.34LKK182 pKa = 11.66ALMSYY187 pKa = 8.12MEE189 pKa = 4.43KK190 pKa = 10.66LSNKK194 pKa = 9.25KK195 pKa = 9.16YY196 pKa = 10.55SYY198 pKa = 10.49YY199 pKa = 10.42FDD201 pKa = 3.55YY202 pKa = 11.2VLYY205 pKa = 10.82NILLATGCRR214 pKa = 11.84FGEE217 pKa = 4.65AIALTWSDD225 pKa = 3.04IDD227 pKa = 4.54FEE229 pKa = 4.55NATIDD234 pKa = 3.43INKK237 pKa = 9.88NYY239 pKa = 9.76NRR241 pKa = 11.84LVDD244 pKa = 3.54IVGTPKK250 pKa = 10.52SKK252 pKa = 10.62AGYY255 pKa = 9.05RR256 pKa = 11.84VISIDD261 pKa = 3.39QKK263 pKa = 9.48TVNLLRR269 pKa = 11.84LYY271 pKa = 10.82KK272 pKa = 10.28NRR274 pKa = 11.84QRR276 pKa = 11.84QLFSEE281 pKa = 4.65VGGEE285 pKa = 3.9APKK288 pKa = 10.93VVFATPTRR296 pKa = 11.84KK297 pKa = 9.52YY298 pKa = 9.69QNTAIRR304 pKa = 11.84QGSLDD309 pKa = 3.54RR310 pKa = 11.84RR311 pKa = 11.84LKK313 pKa = 10.74EE314 pKa = 3.58IGCPRR319 pKa = 11.84FTFHH323 pKa = 7.93AFRR326 pKa = 11.84HH327 pKa = 4.69THH329 pKa = 6.92ASLLLNAGISYY340 pKa = 10.68KK341 pKa = 10.23EE342 pKa = 3.61LQYY345 pKa = 11.49RR346 pKa = 11.84LGHH349 pKa = 6.19ATLAMTMDD357 pKa = 4.24IYY359 pKa = 11.79SHH361 pKa = 6.95LSKK364 pKa = 10.92DD365 pKa = 3.51KK366 pKa = 10.41EE367 pKa = 4.25KK368 pKa = 10.93EE369 pKa = 3.85AVSYY373 pKa = 9.5YY374 pKa = 10.62EE375 pKa = 4.12KK376 pKa = 10.7AINSLL381 pKa = 3.57

Molecular weight: 43.88 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

19

0

19

2770

42

480

145.8

16.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.235 ± 0.689

0.686 ± 0.179

6.39 ± 0.695

7.473 ± 0.655

4.26 ± 0.42

4.765 ± 0.449

1.841 ± 0.244

8.195 ± 0.447

9.856 ± 0.79

9.603 ± 0.511

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.744 ± 0.371

6.065 ± 0.555

3.249 ± 0.44

3.682 ± 0.467

4.477 ± 0.362

4.693 ± 0.457

6.859 ± 0.526

4.079 ± 0.487

0.578 ± 0.237

5.271 ± 0.346
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski