Trichomonas vaginalis virus 1 (TVV1)

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Totiviridae; Trichomonasvirus

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q90155|Q90155_TTV1 RNA-directed RNA polymerase (Fragment) OS=Trichomonas vaginalis virus 1 OX=674953 GN=pol PE=3 SV=1
MM1 pKa = 7.19EE2 pKa = 5.64ASANGLSHH10 pKa = 7.93DD11 pKa = 4.42DD12 pKa = 4.09NANKK16 pKa = 9.65SQNVGPSTLPRR27 pKa = 11.84SDD29 pKa = 3.14KK30 pKa = 11.09QGGEE34 pKa = 3.64KK35 pKa = 10.34HH36 pKa = 6.28EE37 pKa = 4.3NSFNSFSNDD46 pKa = 2.5FFFNFLRR53 pKa = 11.84MSTNTHH59 pKa = 6.17ISDD62 pKa = 3.74SPGVSFVAKK71 pKa = 10.42DD72 pKa = 3.41GTPYY76 pKa = 10.95SSLTIPSGVGRR87 pKa = 11.84LTHH90 pKa = 6.16NVVASAVQLNITASNTLEE108 pKa = 3.65VDD110 pKa = 3.38YY111 pKa = 11.5GFGQDD116 pKa = 3.26VSRR119 pKa = 11.84TTGTIPIPIFDD130 pKa = 3.77GEE132 pKa = 4.61KK133 pKa = 9.59YY134 pKa = 10.29KK135 pKa = 10.09EE136 pKa = 4.0TARR139 pKa = 11.84ALAAIFSKK147 pKa = 10.62KK148 pKa = 10.06GMSVDD153 pKa = 3.52VTSQTVQEE161 pKa = 4.23TLKK164 pKa = 11.21NSDD167 pKa = 3.33LTIATVAAGYY177 pKa = 7.73YY178 pKa = 7.0TALAARR184 pKa = 11.84HH185 pKa = 5.96EE186 pKa = 4.28LTKK189 pKa = 10.79DD190 pKa = 3.28VSEE193 pKa = 4.52AAHH196 pKa = 6.69TIPFVTALSDD206 pKa = 3.54TFSAALNAQRR216 pKa = 11.84TSHH219 pKa = 6.43VISSCLRR226 pKa = 11.84CPNSRR231 pKa = 11.84NAQRR235 pKa = 11.84DD236 pKa = 3.62IVIGTVLWNNVFVEE250 pKa = 4.4SLSEE254 pKa = 3.98HH255 pKa = 5.97NMAVPNPNDD264 pKa = 2.91ISFFIPNKK272 pKa = 9.99ALSSSWWCAIWLLNAFLHH290 pKa = 6.5SFIAPTRR297 pKa = 11.84IHH299 pKa = 6.94IFITQGEE306 pKa = 4.94TYY308 pKa = 10.07HH309 pKa = 6.92LAPFTDD315 pKa = 3.16SDD317 pKa = 3.84VYY319 pKa = 10.42EE320 pKa = 4.07AVRR323 pKa = 11.84FLLAMSKK330 pKa = 10.16SSRR333 pKa = 11.84PMPEE337 pKa = 3.86SVEE340 pKa = 4.31SMLYY344 pKa = 10.39AYY346 pKa = 7.32GTQMIIQPHH355 pKa = 4.82SLYY358 pKa = 10.63TEE360 pKa = 4.42GGLIRR365 pKa = 11.84RR366 pKa = 11.84MIFTVPHH373 pKa = 6.59LPAHH377 pKa = 6.9GYY379 pKa = 9.65FVTNSEE385 pKa = 4.1FSRR388 pKa = 11.84YY389 pKa = 7.39MNIAVPDD396 pKa = 4.1DD397 pKa = 3.67PRR399 pKa = 11.84SAKK402 pKa = 10.69DD403 pKa = 3.21FVIGAGTGLLQIVLAYY419 pKa = 9.72QAAFSCAGPIALHH432 pKa = 5.63WHH434 pKa = 6.29ANDD437 pKa = 5.58AISQGMDD444 pKa = 2.8RR445 pKa = 11.84VASIYY450 pKa = 10.99LEE452 pKa = 3.79GRR454 pKa = 11.84YY455 pKa = 7.58FTIPMAVNVATNVAQYY471 pKa = 7.91TTMVRR476 pKa = 11.84ADD478 pKa = 3.19PEE480 pKa = 4.18YY481 pKa = 10.68RR482 pKa = 11.84HH483 pKa = 5.66TLDD486 pKa = 5.29RR487 pKa = 11.84ILPRR491 pKa = 11.84IFGPSTDD498 pKa = 3.46TVFDD502 pKa = 4.96FIEE505 pKa = 4.19SAITSSWVSIDD516 pKa = 2.85ARR518 pKa = 11.84KK519 pKa = 10.06RR520 pKa = 11.84NGRR523 pKa = 11.84ARR525 pKa = 11.84KK526 pKa = 9.01FRR528 pKa = 11.84TAFINRR534 pKa = 11.84FHH536 pKa = 7.21DD537 pKa = 3.54PEE539 pKa = 3.96FAYY542 pKa = 10.14MFGITGNGIEE552 pKa = 4.07RR553 pKa = 11.84MEE555 pKa = 4.37GKK557 pKa = 8.6VTSNIAQEE565 pKa = 3.93VDD567 pKa = 3.16YY568 pKa = 11.37LMNGGDD574 pKa = 4.79LRR576 pKa = 11.84NCPILRR582 pKa = 11.84TLKK585 pKa = 9.83AAEE588 pKa = 4.14RR589 pKa = 11.84EE590 pKa = 4.18EE591 pKa = 4.72TVTFMCKK598 pKa = 9.82EE599 pKa = 4.18KK600 pKa = 10.96VGSLYY605 pKa = 10.78AIDD608 pKa = 3.41GTVRR612 pKa = 11.84VFKK615 pKa = 10.72RR616 pKa = 11.84FEE618 pKa = 4.46TIDD621 pKa = 3.6LAQLGWTSHH630 pKa = 4.96GKK632 pKa = 9.31VMKK635 pKa = 9.69PYY637 pKa = 10.74AFRR640 pKa = 11.84APVIQGMTICSTAYY654 pKa = 8.86TSTAIDD660 pKa = 3.78IITTVFGPLRR670 pKa = 11.84LRR672 pKa = 11.84VGSLFEE678 pKa = 3.97

Molecular weight: 74.92 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q90155|Q90155_TTV1 RNA-directed RNA polymerase (Fragment) OS=Trichomonas vaginalis virus 1 OX=674953 GN=pol PE=3 SV=1
DDD2 pKa = 4.78FLSKKK7 pKa = 10.49VRR9 pKa = 11.84CGPVIPSVKKK19 pKa = 9.74HH20 pKa = 5.5HH21 pKa = 6.27NINYYY26 pKa = 10.17SILKKK31 pKa = 10.49HH32 pKa = 6.04GNEEE36 pKa = 3.99YY37 pKa = 9.7FVPGYYY43 pKa = 10.73WVLQDDD49 pKa = 5.65DD50 pKa = 4.48YY51 pKa = 11.87LNAVKKK57 pKa = 9.93VGEEE61 pKa = 4.51DDD63 pKa = 3.98PPNQLPYYY71 pKa = 11.11DD72 pKa = 4.63DD73 pKa = 6.11DD74 pKa = 5.37LFTYYY79 pKa = 10.56KKK81 pKa = 9.93LLYYY85 pKa = 10.41DD86 pKa = 4.23YY87 pKa = 10.51SHHH90 pKa = 6.81PEEE93 pKa = 4.23RR94 pKa = 11.84HHH96 pKa = 5.87KK97 pKa = 10.72PRR99 pKa = 11.84LLTSEEE105 pKa = 4.73EEE107 pKa = 4.08QLFPLKKK114 pKa = 10.3EE115 pKa = 3.76SAARR119 pKa = 11.84TKKK122 pKa = 11.23NFYYY126 pKa = 11.3RR127 pKa = 11.84TLWNEEE133 pKa = 3.91TSDDD137 pKa = 3.13KK138 pKa = 11.34AFKKK142 pKa = 10.5GTYYY146 pKa = 10.11DDD148 pKa = 3.91VAGLLMWQQCALMWSLPKKK167 pKa = 10.65IINKKK172 pKa = 9.51ISGVCDDD179 pKa = 3.43LTEEE183 pKa = 4.38KK184 pKa = 10.97SLTLLKKK191 pKa = 10.49ISDDD195 pKa = 3.64LKKK198 pKa = 10.38LGLAYYY204 pKa = 10.64PIFRR208 pKa = 11.84LFIEEE213 pKa = 4.84PTLLGRR219 pKa = 11.84GAIPGDDD226 pKa = 3.15ALDDD230 pKa = 3.59KKK232 pKa = 10.91HH233 pKa = 6.52LTYYY237 pKa = 10.29PLMTVDDD244 pKa = 3.57PKKK247 pKa = 9.7QLHHH251 pKa = 5.85DD252 pKa = 4.82IYYY255 pKa = 10.84LLSRR259 pKa = 11.84NYYY262 pKa = 9.41NTKKK266 pKa = 9.54SSFEEE271 pKa = 3.66HH272 pKa = 6.5HH273 pKa = 6.74EEE275 pKa = 4.18EE276 pKa = 4.43LLWSRR281 pKa = 11.84SGSHHH286 pKa = 6.32YY287 pKa = 11.13YY288 pKa = 9.85DDD290 pKa = 3.61EE291 pKa = 4.81IDDD294 pKa = 3.8LLPPQPTRR302 pKa = 11.84KKK304 pKa = 9.37EE305 pKa = 3.75LDDD308 pKa = 3.72VTIDDD313 pKa = 4.02YY314 pKa = 10.63KKK316 pKa = 9.99CKKK319 pKa = 7.74QVFIRR324 pKa = 11.84QSRR327 pKa = 11.84KKK329 pKa = 9.69EEE331 pKa = 4.08HH332 pKa = 5.88KKK334 pKa = 9.68EE335 pKa = 3.72FIYYY339 pKa = 10.13CDDD342 pKa = 3.73ISYYY346 pKa = 9.69YYY348 pKa = 10.58DDD350 pKa = 4.24VLKKK354 pKa = 10.68FEEE357 pKa = 5.38GWQDDD362 pKa = 2.84EEE364 pKa = 5.9ILSPGDDD371 pKa = 3.6YY372 pKa = 10.61SEEE375 pKa = 3.95LHHH378 pKa = 6.73KKK380 pKa = 9.77SGYYY384 pKa = 9.98KK385 pKa = 8.42YY386 pKa = 10.71KK387 pKa = 11.29MLDDD391 pKa = 3.61YY392 pKa = 11.3DDD394 pKa = 5.84NSQHHH399 pKa = 6.71IQSMRR404 pKa = 11.84LIFEEE409 pKa = 4.35MKKK412 pKa = 10.79EE413 pKa = 4.04LPPEEE418 pKa = 4.42SFALDDD424 pKa = 3.01CIASFDDD431 pKa = 3.88MQTSDDD437 pKa = 3.33RR438 pKa = 11.84KKK440 pKa = 5.64TATLPSGHHH449 pKa = 7.21ATTFINTVLNWCYYY463 pKa = 9.23QMVGLKKK470 pKa = 9.52DDD472 pKa = 4.16FMCAGDDD479 pKa = 4.46DD480 pKa = 4.1ILMSQEEE487 pKa = 4.57ISLAPILKKK496 pKa = 10.02QFKKK500 pKa = 10.32NPSKKK505 pKa = 10.84STGTRR510 pKa = 11.84GEEE513 pKa = 4.34LRR515 pKa = 11.84KKK517 pKa = 9.45HH518 pKa = 4.23YY519 pKa = 10.01EEE521 pKa = 5.28GVFAYYY527 pKa = 8.75CRR529 pKa = 11.84AIASLVSGNWLSEEE543 pKa = 4.12LRR545 pKa = 11.84DDD547 pKa = 3.6TPILVPIQNGIDDD560 pKa = 3.56LRR562 pKa = 11.84SRR564 pKa = 11.84AGLLGVPWKKK574 pKa = 10.76GLSEEE579 pKa = 4.86IEEE582 pKa = 4.55EEE584 pKa = 4.51IPKKK588 pKa = 9.28DD589 pKa = 3.53SMALLNSHHH598 pKa = 6.99AGPGLITRR606 pKa = 11.84DDD608 pKa = 3.58YY609 pKa = 11.53SFTVTPTPPKKK620 pKa = 9.61HHH622 pKa = 6.77SLEEE626 pKa = 4.23YY627 pKa = 9.01ATRR630 pKa = 11.84HHH632 pKa = 6.01LQDDD636 pKa = 3.62CKKK639 pKa = 9.78HH640 pKa = 5.67PWKKK644 pKa = 10.56LTANEEE650 pKa = 4.37NKKK653 pKa = 10.3GQQIKKK659 pKa = 10.35KK660 pKa = 8.89SHHH663 pKa = 5.28HHH665 pKa = 5.12SQTKKK670 pKa = 7.74TYYY673 pKa = 8.04KK674 pKa = 10.31VYYY677 pKa = 9.85EE678 pKa = 4.11FKKK681 pKa = 10.82SGLPTVLSEEE691 pKa = 4.36SQSALSLVWWQAMLKKK707 pKa = 10.25EE708 pKa = 4.09MQDDD712 pKa = 3.36YY713 pKa = 8.34TKKK716 pKa = 10.71KK717 pKa = 10.21KK718 pKa = 9.84DD719 pKa = 3.19HHH721 pKa = 6.25YYY723 pKa = 9.96CNACTSSVSGDDD735 pKa = 3.03FLRR738 pKa = 11.84ATSKKK743 pKa = 10.11AGVLITSLISSSS

Molecular weight: 85.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1434

678

756

717.0

80.4

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.531 ± 1.119

1.604 ± 0.363

5.091 ± 0.142

4.463 ± 0.024

5.021 ± 0.559

5.439 ± 0.386

2.859 ± 0.036

6.206 ± 0.461

5.021 ± 1.129

9.484 ± 1.81

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.58 ± 0.141

4.393 ± 0.395

5.021 ± 0.285

3.347 ± 0.44

4.881 ± 0.46

8.926 ± 0.049

7.252 ± 0.64

5.509 ± 0.811

1.534 ± 0.319

3.835 ± 0.375
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski