Amino acid dipepetide frequency for Fusarium langsethiae hypovirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.304AlaAla: 4.304 ± 0.0
0.506AlaCys: 0.506 ± 0.0
3.797AlaAsp: 3.797 ± 0.0
6.329AlaGlu: 6.329 ± 0.0
4.557AlaPhe: 4.557 ± 0.0
5.316AlaGly: 5.316 ± 0.0
1.013AlaHis: 1.013 ± 0.0
2.785AlaIle: 2.785 ± 0.0
3.544AlaLys: 3.544 ± 0.0
10.127AlaLeu: 10.127 ± 0.0
1.519AlaMet: 1.519 ± 0.0
4.557AlaAsn: 4.557 ± 0.0
3.038AlaPro: 3.038 ± 0.0
2.278AlaGln: 2.278 ± 0.0
6.329AlaArg: 6.329 ± 0.0
6.329AlaSer: 6.329 ± 0.0
3.544AlaThr: 3.544 ± 0.0
4.051AlaVal: 4.051 ± 0.0
1.266AlaTrp: 1.266 ± 0.0
2.785AlaTyr: 2.785 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.013CysAla: 1.013 ± 0.0
0.253CysCys: 0.253 ± 0.0
1.013CysAsp: 1.013 ± 0.0
0.759CysGlu: 0.759 ± 0.0
0.759CysPhe: 0.759 ± 0.0
1.013CysGly: 1.013 ± 0.0
0.506CysHis: 0.506 ± 0.0
0.759CysIle: 0.759 ± 0.0
0.759CysLys: 0.759 ± 0.0
0.506CysLeu: 0.506 ± 0.0
0.506CysMet: 0.506 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.759CysPro: 0.759 ± 0.0
0.759CysGln: 0.759 ± 0.0
1.013CysArg: 1.013 ± 0.0
0.506CysSer: 0.506 ± 0.0
0.759CysThr: 0.759 ± 0.0
0.253CysVal: 0.253 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.253CysTyr: 0.253 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.57AspAla: 5.57 ± 0.0
0.253AspCys: 0.253 ± 0.0
3.291AspAsp: 3.291 ± 0.0
2.532AspGlu: 2.532 ± 0.0
3.544AspPhe: 3.544 ± 0.0
1.772AspGly: 1.772 ± 0.0
1.519AspHis: 1.519 ± 0.0
3.038AspIle: 3.038 ± 0.0
3.038AspLys: 3.038 ± 0.0
4.051AspLeu: 4.051 ± 0.0
0.759AspMet: 0.759 ± 0.0
2.278AspAsn: 2.278 ± 0.0
3.038AspPro: 3.038 ± 0.0
2.278AspGln: 2.278 ± 0.0
3.291AspArg: 3.291 ± 0.0
4.051AspSer: 4.051 ± 0.0
2.785AspThr: 2.785 ± 0.0
3.038AspVal: 3.038 ± 0.0
0.506AspTrp: 0.506 ± 0.0
1.772AspTyr: 1.772 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.57GluAla: 5.57 ± 0.0
1.519GluCys: 1.519 ± 0.0
3.797GluAsp: 3.797 ± 0.0
5.063GluGlu: 5.063 ± 0.0
2.278GluPhe: 2.278 ± 0.0
3.291GluGly: 3.291 ± 0.0
2.025GluHis: 2.025 ± 0.0
2.278GluIle: 2.278 ± 0.0
3.544GluLys: 3.544 ± 0.0
6.582GluLeu: 6.582 ± 0.0
0.759GluMet: 0.759 ± 0.0
3.291GluAsn: 3.291 ± 0.0
3.544GluPro: 3.544 ± 0.0
2.532GluGln: 2.532 ± 0.0
3.544GluArg: 3.544 ± 0.0
4.304GluSer: 4.304 ± 0.0
2.025GluThr: 2.025 ± 0.0
4.557GluVal: 4.557 ± 0.0
1.013GluTrp: 1.013 ± 0.0
1.772GluTyr: 1.772 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
4.557PheAla: 4.557 ± 0.0
0.253PheCys: 0.253 ± 0.0
2.278PheAsp: 2.278 ± 0.0
1.266PheGlu: 1.266 ± 0.0
2.532PhePhe: 2.532 ± 0.0
3.291PheGly: 3.291 ± 0.0
0.759PheHis: 0.759 ± 0.0
4.557PheIle: 4.557 ± 0.0
2.278PheLys: 2.278 ± 0.0
4.557PheLeu: 4.557 ± 0.0
1.013PheMet: 1.013 ± 0.0
0.759PheAsn: 0.759 ± 0.0
1.772PhePro: 1.772 ± 0.0
2.532PheGln: 2.532 ± 0.0
2.025PheArg: 2.025 ± 0.0
3.797PheSer: 3.797 ± 0.0
3.291PheThr: 3.291 ± 0.0
4.557PheVal: 4.557 ± 0.0
0.506PheTrp: 0.506 ± 0.0
1.519PheTyr: 1.519 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.051GlyAla: 4.051 ± 0.0
0.506GlyCys: 0.506 ± 0.0
3.797GlyAsp: 3.797 ± 0.0
3.797GlyGlu: 3.797 ± 0.0
2.278GlyPhe: 2.278 ± 0.0
3.544GlyGly: 3.544 ± 0.0
1.519GlyHis: 1.519 ± 0.0
3.038GlyIle: 3.038 ± 0.0
5.57GlyLys: 5.57 ± 0.0
4.051GlyLeu: 4.051 ± 0.0
1.266GlyMet: 1.266 ± 0.0
2.785GlyAsn: 2.785 ± 0.0
2.532GlyPro: 2.532 ± 0.0
1.266GlyGln: 1.266 ± 0.0
4.304GlyArg: 4.304 ± 0.0
4.051GlySer: 4.051 ± 0.0
2.025GlyThr: 2.025 ± 0.0
3.797GlyVal: 3.797 ± 0.0
1.013GlyTrp: 1.013 ± 0.0
3.291GlyTyr: 3.291 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.532HisAla: 2.532 ± 0.0
0.253HisCys: 0.253 ± 0.0
1.013HisAsp: 1.013 ± 0.0
1.772HisGlu: 1.772 ± 0.0
1.013HisPhe: 1.013 ± 0.0
2.278HisGly: 2.278 ± 0.0
1.519HisHis: 1.519 ± 0.0
1.519HisIle: 1.519 ± 0.0
1.772HisLys: 1.772 ± 0.0
2.532HisLeu: 2.532 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.759HisAsn: 0.759 ± 0.0
1.772HisPro: 1.772 ± 0.0
1.013HisGln: 1.013 ± 0.0
1.519HisArg: 1.519 ± 0.0
2.532HisSer: 2.532 ± 0.0
0.253HisThr: 0.253 ± 0.0
1.266HisVal: 1.266 ± 0.0
1.266HisTrp: 1.266 ± 0.0
1.266HisTyr: 1.266 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.81IleAla: 4.81 ± 0.0
0.253IleCys: 0.253 ± 0.0
1.772IleAsp: 1.772 ± 0.0
2.532IleGlu: 2.532 ± 0.0
3.038IlePhe: 3.038 ± 0.0
2.278IleGly: 2.278 ± 0.0
2.278IleHis: 2.278 ± 0.0
1.266IleIle: 1.266 ± 0.0
3.544IleLys: 3.544 ± 0.0
5.823IleLeu: 5.823 ± 0.0
0.506IleMet: 0.506 ± 0.0
1.266IleAsn: 1.266 ± 0.0
3.291IlePro: 3.291 ± 0.0
2.025IleGln: 2.025 ± 0.0
2.532IleArg: 2.532 ± 0.0
2.785IleSer: 2.785 ± 0.0
1.266IleThr: 1.266 ± 0.0
2.278IleVal: 2.278 ± 0.0
1.013IleTrp: 1.013 ± 0.0
1.266IleTyr: 1.266 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.278LysAla: 2.278 ± 0.0
1.266LysCys: 1.266 ± 0.0
3.291LysAsp: 3.291 ± 0.0
4.304LysGlu: 4.304 ± 0.0
2.785LysPhe: 2.785 ± 0.0
2.785LysGly: 2.785 ± 0.0
1.519LysHis: 1.519 ± 0.0
2.278LysIle: 2.278 ± 0.0
1.772LysLys: 1.772 ± 0.0
7.848LysLeu: 7.848 ± 0.0
1.772LysMet: 1.772 ± 0.0
2.785LysAsn: 2.785 ± 0.0
2.532LysPro: 2.532 ± 0.0
1.519LysGln: 1.519 ± 0.0
3.291LysArg: 3.291 ± 0.0
4.557LysSer: 4.557 ± 0.0
3.038LysThr: 3.038 ± 0.0
4.557LysVal: 4.557 ± 0.0
0.506LysTrp: 0.506 ± 0.0
1.772LysTyr: 1.772 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
8.861LeuAla: 8.861 ± 0.0
1.519LeuCys: 1.519 ± 0.0
4.557LeuAsp: 4.557 ± 0.0
8.608LeuGlu: 8.608 ± 0.0
3.544LeuPhe: 3.544 ± 0.0
4.051LeuGly: 4.051 ± 0.0
1.772LeuHis: 1.772 ± 0.0
5.823LeuIle: 5.823 ± 0.0
3.038LeuLys: 3.038 ± 0.0
8.861LeuLeu: 8.861 ± 0.0
2.785LeuMet: 2.785 ± 0.0
3.038LeuAsn: 3.038 ± 0.0
6.835LeuPro: 6.835 ± 0.0
2.025LeuGln: 2.025 ± 0.0
6.329LeuArg: 6.329 ± 0.0
8.101LeuSer: 8.101 ± 0.0
7.089LeuThr: 7.089 ± 0.0
6.835LeuVal: 6.835 ± 0.0
1.266LeuTrp: 1.266 ± 0.0
4.051LeuTyr: 4.051 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
2.025MetAla: 2.025 ± 0.0
0.506MetCys: 0.506 ± 0.0
0.253MetAsp: 0.253 ± 0.0
2.785MetGlu: 2.785 ± 0.0
0.759MetPhe: 0.759 ± 0.0
0.506MetGly: 0.506 ± 0.0
1.266MetHis: 1.266 ± 0.0
0.253MetIle: 0.253 ± 0.0
0.759MetLys: 0.759 ± 0.0
1.013MetLeu: 1.013 ± 0.0
0.253MetMet: 0.253 ± 0.0
0.759MetAsn: 0.759 ± 0.0
1.519MetPro: 1.519 ± 0.0
1.266MetGln: 1.266 ± 0.0
1.013MetArg: 1.013 ± 0.0
1.519MetSer: 1.519 ± 0.0
1.013MetThr: 1.013 ± 0.0
1.519MetVal: 1.519 ± 0.0
0.253MetTrp: 0.253 ± 0.0
1.266MetTyr: 1.266 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
4.304AsnAla: 4.304 ± 0.0
0.253AsnCys: 0.253 ± 0.0
2.278AsnAsp: 2.278 ± 0.0
2.025AsnGlu: 2.025 ± 0.0
1.772AsnPhe: 1.772 ± 0.0
1.772AsnGly: 1.772 ± 0.0
1.519AsnHis: 1.519 ± 0.0
2.278AsnIle: 2.278 ± 0.0
1.772AsnLys: 1.772 ± 0.0
3.544AsnLeu: 3.544 ± 0.0
0.506AsnMet: 0.506 ± 0.0
1.772AsnAsn: 1.772 ± 0.0
3.291AsnPro: 3.291 ± 0.0
2.025AsnGln: 2.025 ± 0.0
1.772AsnArg: 1.772 ± 0.0
3.291AsnSer: 3.291 ± 0.0
1.519AsnThr: 1.519 ± 0.0
3.038AsnVal: 3.038 ± 0.0
1.013AsnTrp: 1.013 ± 0.0
1.013AsnTyr: 1.013 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.797ProAla: 3.797 ± 0.0
0.253ProCys: 0.253 ± 0.0
2.025ProAsp: 2.025 ± 0.0
2.025ProGlu: 2.025 ± 0.0
3.038ProPhe: 3.038 ± 0.0
4.304ProGly: 4.304 ± 0.0
0.759ProHis: 0.759 ± 0.0
2.785ProIle: 2.785 ± 0.0
3.291ProLys: 3.291 ± 0.0
4.81ProLeu: 4.81 ± 0.0
1.519ProMet: 1.519 ± 0.0
1.772ProAsn: 1.772 ± 0.0
2.532ProPro: 2.532 ± 0.0
2.025ProGln: 2.025 ± 0.0
3.038ProArg: 3.038 ± 0.0
3.291ProSer: 3.291 ± 0.0
3.291ProThr: 3.291 ± 0.0
6.329ProVal: 6.329 ± 0.0
1.266ProTrp: 1.266 ± 0.0
2.278ProTyr: 2.278 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.544GlnAla: 3.544 ± 0.0
0.253GlnCys: 0.253 ± 0.0
1.519GlnAsp: 1.519 ± 0.0
2.278GlnGlu: 2.278 ± 0.0
2.532GlnPhe: 2.532 ± 0.0
2.785GlnGly: 2.785 ± 0.0
0.506GlnHis: 0.506 ± 0.0
0.759GlnIle: 0.759 ± 0.0
2.532GlnLys: 2.532 ± 0.0
4.557GlnLeu: 4.557 ± 0.0
0.0GlnMet: 0.0 ± 0.0
1.266GlnAsn: 1.266 ± 0.0
2.278GlnPro: 2.278 ± 0.0
1.772GlnGln: 1.772 ± 0.0
2.278GlnArg: 2.278 ± 0.0
2.278GlnSer: 2.278 ± 0.0
1.266GlnThr: 1.266 ± 0.0
3.038GlnVal: 3.038 ± 0.0
0.759GlnTrp: 0.759 ± 0.0
1.266GlnTyr: 1.266 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
3.038ArgAla: 3.038 ± 0.0
0.506ArgCys: 0.506 ± 0.0
4.557ArgAsp: 4.557 ± 0.0
3.038ArgGlu: 3.038 ± 0.0
2.532ArgPhe: 2.532 ± 0.0
3.038ArgGly: 3.038 ± 0.0
1.772ArgHis: 1.772 ± 0.0
2.532ArgIle: 2.532 ± 0.0
6.582ArgLys: 6.582 ± 0.0
5.823ArgLeu: 5.823 ± 0.0
0.506ArgMet: 0.506 ± 0.0
2.532ArgAsn: 2.532 ± 0.0
1.266ArgPro: 1.266 ± 0.0
3.038ArgGln: 3.038 ± 0.0
2.532ArgArg: 2.532 ± 0.0
5.57ArgSer: 5.57 ± 0.0
3.038ArgThr: 3.038 ± 0.0
3.797ArgVal: 3.797 ± 0.0
1.519ArgTrp: 1.519 ± 0.0
3.291ArgTyr: 3.291 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.557SerAla: 4.557 ± 0.0
1.266SerCys: 1.266 ± 0.0
3.291SerAsp: 3.291 ± 0.0
5.57SerGlu: 5.57 ± 0.0
3.038SerPhe: 3.038 ± 0.0
5.063SerGly: 5.063 ± 0.0
1.013SerHis: 1.013 ± 0.0
2.278SerIle: 2.278 ± 0.0
3.797SerLys: 3.797 ± 0.0
6.582SerLeu: 6.582 ± 0.0
2.025SerMet: 2.025 ± 0.0
2.532SerAsn: 2.532 ± 0.0
6.076SerPro: 6.076 ± 0.0
2.532SerGln: 2.532 ± 0.0
5.57SerArg: 5.57 ± 0.0
5.063SerSer: 5.063 ± 0.0
3.544SerThr: 3.544 ± 0.0
5.57SerVal: 5.57 ± 0.0
2.025SerTrp: 2.025 ± 0.0
1.772SerTyr: 1.772 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.291ThrAla: 3.291 ± 0.0
0.759ThrCys: 0.759 ± 0.0
2.025ThrAsp: 2.025 ± 0.0
2.532ThrGlu: 2.532 ± 0.0
1.519ThrPhe: 1.519 ± 0.0
5.063ThrGly: 5.063 ± 0.0
2.278ThrHis: 2.278 ± 0.0
2.025ThrIle: 2.025 ± 0.0
3.291ThrLys: 3.291 ± 0.0
5.57ThrLeu: 5.57 ± 0.0
0.506ThrMet: 0.506 ± 0.0
1.519ThrAsn: 1.519 ± 0.0
2.785ThrPro: 2.785 ± 0.0
2.025ThrGln: 2.025 ± 0.0
2.532ThrArg: 2.532 ± 0.0
3.544ThrSer: 3.544 ± 0.0
2.785ThrThr: 2.785 ± 0.0
2.278ThrVal: 2.278 ± 0.0
0.759ThrTrp: 0.759 ± 0.0
1.266ThrTyr: 1.266 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.063ValAla: 5.063 ± 0.0
0.506ValCys: 0.506 ± 0.0
4.304ValAsp: 4.304 ± 0.0
2.532ValGlu: 2.532 ± 0.0
2.785ValPhe: 2.785 ± 0.0
3.291ValGly: 3.291 ± 0.0
1.772ValHis: 1.772 ± 0.0
3.797ValIle: 3.797 ± 0.0
3.544ValLys: 3.544 ± 0.0
6.835ValLeu: 6.835 ± 0.0
1.519ValMet: 1.519 ± 0.0
4.051ValAsn: 4.051 ± 0.0
3.797ValPro: 3.797 ± 0.0
2.278ValGln: 2.278 ± 0.0
4.81ValArg: 4.81 ± 0.0
4.81ValSer: 4.81 ± 0.0
3.544ValThr: 3.544 ± 0.0
4.557ValVal: 4.557 ± 0.0
0.506ValTrp: 0.506 ± 0.0
3.544ValTyr: 3.544 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.519TrpAla: 1.519 ± 0.0
0.506TrpCys: 0.506 ± 0.0
0.506TrpAsp: 0.506 ± 0.0
0.506TrpGlu: 0.506 ± 0.0
2.278TrpPhe: 2.278 ± 0.0
0.759TrpGly: 0.759 ± 0.0
0.506TrpHis: 0.506 ± 0.0
0.506TrpIle: 0.506 ± 0.0
0.253TrpLys: 0.253 ± 0.0
2.532TrpLeu: 2.532 ± 0.0
0.506TrpMet: 0.506 ± 0.0
1.013TrpAsn: 1.013 ± 0.0
0.506TrpPro: 0.506 ± 0.0
1.013TrpGln: 1.013 ± 0.0
0.506TrpArg: 0.506 ± 0.0
1.519TrpSer: 1.519 ± 0.0
0.506TrpThr: 0.506 ± 0.0
1.013TrpVal: 1.013 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.759TrpTyr: 0.759 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.291TyrAla: 3.291 ± 0.0
0.759TyrCys: 0.759 ± 0.0
3.038TyrAsp: 3.038 ± 0.0
3.038TyrGlu: 3.038 ± 0.0
1.519TyrPhe: 1.519 ± 0.0
2.532TyrGly: 2.532 ± 0.0
2.025TyrHis: 2.025 ± 0.0
1.266TyrIle: 1.266 ± 0.0
1.772TyrLys: 1.772 ± 0.0
2.785TyrLeu: 2.785 ± 0.0
2.025TyrMet: 2.025 ± 0.0
2.025TyrAsn: 2.025 ± 0.0
1.266TyrPro: 1.266 ± 0.0
1.266TyrGln: 1.266 ± 0.0
2.278TyrArg: 2.278 ± 0.0
1.266TyrSer: 1.266 ± 0.0
1.772TyrThr: 1.772 ± 0.0
1.519TyrVal: 1.519 ± 0.0
0.759TyrTrp: 0.759 ± 0.0
2.025TyrTyr: 2.025 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3951 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski