Hermit crab associated circular genome

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 7.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0K1RL19|A0A0K1RL19_9CIRC ATP-dependent helicase Rep OS=Hermit crab associated circular genome OX=1692251 PE=3 SV=1
MM1 pKa = 7.62ISKK4 pKa = 9.76RR5 pKa = 11.84WCYY8 pKa = 9.19TLNNYY13 pKa = 9.91SEE15 pKa = 5.22DD16 pKa = 3.62DD17 pKa = 4.11VVTMKK22 pKa = 10.81AVPTTYY28 pKa = 10.05HH29 pKa = 5.58VLGKK33 pKa = 10.3EE34 pKa = 3.98VGTNGTPHH42 pKa = 6.16IQGFLTFKK50 pKa = 10.48SNKK53 pKa = 9.05RR54 pKa = 11.84LSAMKK59 pKa = 10.04KK60 pKa = 8.86INARR64 pKa = 11.84AHH66 pKa = 5.39WEE68 pKa = 4.21VAKK71 pKa = 9.57GTSKK75 pKa = 10.45QAADD79 pKa = 3.63YY80 pKa = 10.26CKK82 pKa = 10.35KK83 pKa = 10.65DD84 pKa = 3.39GNFEE88 pKa = 4.16EE89 pKa = 5.08LGSVPSQGKK98 pKa = 7.96RR99 pKa = 11.84TDD101 pKa = 3.8LEE103 pKa = 4.29DD104 pKa = 3.66AAVMITAGEE113 pKa = 4.1SLKK116 pKa = 10.65RR117 pKa = 11.84VAEE120 pKa = 4.0EE121 pKa = 4.16HH122 pKa = 5.76PTVVIKK128 pKa = 8.45YY129 pKa = 9.43HH130 pKa = 6.6KK131 pKa = 10.12GLSALKK137 pKa = 10.35SLLSEE142 pKa = 4.12SRR144 pKa = 11.84EE145 pKa = 3.94TDD147 pKa = 3.17DD148 pKa = 5.47VRR150 pKa = 11.84GIWLHH155 pKa = 6.11GPPGCGKK162 pKa = 9.5SHH164 pKa = 7.9LARR167 pKa = 11.84TVSPYY172 pKa = 11.19LKK174 pKa = 10.41AQNKK178 pKa = 7.01WWDD181 pKa = 3.57GYY183 pKa = 11.74ANEE186 pKa = 4.77EE187 pKa = 4.22YY188 pKa = 11.34VLIDD192 pKa = 5.01DD193 pKa = 4.5FDD195 pKa = 5.11KK196 pKa = 11.4GGKK199 pKa = 9.41CLGHH203 pKa = 5.98YY204 pKa = 10.0LKK206 pKa = 10.89LWADD210 pKa = 3.54KK211 pKa = 10.82YY212 pKa = 10.55EE213 pKa = 4.28CTGEE217 pKa = 3.98IKK219 pKa = 10.74GATVALNHH227 pKa = 6.7RR228 pKa = 11.84KK229 pKa = 9.47FIITSNYY236 pKa = 9.29HH237 pKa = 5.95PDD239 pKa = 3.76EE240 pKa = 5.25IFDD243 pKa = 4.51DD244 pKa = 4.92DD245 pKa = 4.63SVLLEE250 pKa = 4.64AITRR254 pKa = 11.84RR255 pKa = 11.84FSIRR259 pKa = 11.84SCWHH263 pKa = 6.3HH264 pKa = 6.69SRR266 pKa = 11.84EE267 pKa = 4.11ADD269 pKa = 3.6AVWFDD274 pKa = 3.72SLTKK278 pKa = 10.36KK279 pKa = 9.3EE280 pKa = 3.99AHH282 pKa = 6.51AATANKK288 pKa = 10.08

Molecular weight: 32.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K1RL19|A0A0K1RL19_9CIRC ATP-dependent helicase Rep OS=Hermit crab associated circular genome OX=1692251 PE=3 SV=1
MM1 pKa = 7.62ISKK4 pKa = 9.76RR5 pKa = 11.84WCYY8 pKa = 9.19TLNNYY13 pKa = 9.91SEE15 pKa = 5.22DD16 pKa = 3.62DD17 pKa = 4.11VVTMKK22 pKa = 10.81AVPTTYY28 pKa = 10.05HH29 pKa = 5.58VLGKK33 pKa = 10.3EE34 pKa = 3.98VGTNGTPHH42 pKa = 6.16IQGFLTFKK50 pKa = 10.48SNKK53 pKa = 9.05RR54 pKa = 11.84LSAMKK59 pKa = 10.04KK60 pKa = 8.86INARR64 pKa = 11.84AHH66 pKa = 5.39WEE68 pKa = 4.21VAKK71 pKa = 9.57GTSKK75 pKa = 10.45QAADD79 pKa = 3.63YY80 pKa = 10.26CKK82 pKa = 10.35KK83 pKa = 10.65DD84 pKa = 3.39GNFEE88 pKa = 4.16EE89 pKa = 5.08LGSVPSQGKK98 pKa = 7.96RR99 pKa = 11.84TDD101 pKa = 3.8LEE103 pKa = 4.29DD104 pKa = 3.66AAVMITAGEE113 pKa = 4.1SLKK116 pKa = 10.65RR117 pKa = 11.84VAEE120 pKa = 4.0EE121 pKa = 4.16HH122 pKa = 5.76PTVVIKK128 pKa = 8.45YY129 pKa = 9.43HH130 pKa = 6.6KK131 pKa = 10.12GLSALKK137 pKa = 10.35SLLSEE142 pKa = 4.12SRR144 pKa = 11.84EE145 pKa = 3.94TDD147 pKa = 3.17DD148 pKa = 5.47VRR150 pKa = 11.84GIWLHH155 pKa = 6.11GPPGCGKK162 pKa = 9.5SHH164 pKa = 7.9LARR167 pKa = 11.84TVSPYY172 pKa = 11.19LKK174 pKa = 10.41AQNKK178 pKa = 7.01WWDD181 pKa = 3.57GYY183 pKa = 11.74ANEE186 pKa = 4.77EE187 pKa = 4.22YY188 pKa = 11.34VLIDD192 pKa = 5.01DD193 pKa = 4.5FDD195 pKa = 5.11KK196 pKa = 11.4GGKK199 pKa = 9.41CLGHH203 pKa = 5.98YY204 pKa = 10.0LKK206 pKa = 10.89LWADD210 pKa = 3.54KK211 pKa = 10.82YY212 pKa = 10.55EE213 pKa = 4.28CTGEE217 pKa = 3.98IKK219 pKa = 10.74GATVALNHH227 pKa = 6.7RR228 pKa = 11.84KK229 pKa = 9.47FIITSNYY236 pKa = 9.29HH237 pKa = 5.95PDD239 pKa = 3.76EE240 pKa = 5.25IFDD243 pKa = 4.51DD244 pKa = 4.92DD245 pKa = 4.63SVLLEE250 pKa = 4.64AITRR254 pKa = 11.84RR255 pKa = 11.84FSIRR259 pKa = 11.84SCWHH263 pKa = 6.3HH264 pKa = 6.69SRR266 pKa = 11.84EE267 pKa = 4.11ADD269 pKa = 3.6AVWFDD274 pKa = 3.72SLTKK278 pKa = 10.36KK279 pKa = 9.3EE280 pKa = 3.99AHH282 pKa = 6.51AATANKK288 pKa = 10.08

Molecular weight: 32.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

288

288

288

288.0

32.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.681 ± 0.0

2.083 ± 0.0

6.597 ± 0.0

6.597 ± 0.0

2.778 ± 0.0

6.944 ± 0.0

4.514 ± 0.0

4.514 ± 0.0

9.722 ± 0.0

7.639 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.389 ± 0.0

3.819 ± 0.0

2.778 ± 0.0

1.389 ± 0.0

4.514 ± 0.0

6.944 ± 0.0

6.597 ± 0.0

5.903 ± 0.0

2.778 ± 0.0

3.819 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski