Gordonia phage Tanis

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Deejayvirinae; Tanisvirus; Gordonia virus Tanis

Average proteome isoelectric point is 6.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 93 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5P8D9C0|A0A5P8D9C0_9CAUD Uncharacterized protein OS=Gordonia phage Tanis OX=2652415 GN=33 PE=4 SV=1
MM1 pKa = 7.8SEE3 pKa = 4.86LKK5 pKa = 9.67WDD7 pKa = 3.72SAGEE11 pKa = 3.92RR12 pKa = 11.84LYY14 pKa = 10.32EE15 pKa = 4.01TGVDD19 pKa = 3.47HH20 pKa = 6.95GVLYY24 pKa = 10.55IPDD27 pKa = 3.57NMGEE31 pKa = 4.09YY32 pKa = 10.64SNGYY36 pKa = 8.4AWNGLTSVSEE46 pKa = 4.39SPSGAEE52 pKa = 4.81SNPQYY57 pKa = 11.32ADD59 pKa = 3.31NIKK62 pKa = 10.1YY63 pKa = 10.68LNLISAEE70 pKa = 4.05EE71 pKa = 3.95FGATIEE77 pKa = 4.25AFTYY81 pKa = 10.1PDD83 pKa = 4.39EE84 pKa = 5.31FSQCDD89 pKa = 3.55GTALIGGVQIAQQTRR104 pKa = 11.84KK105 pKa = 10.29SFGFSYY111 pKa = 9.38RR112 pKa = 11.84TLIGNDD118 pKa = 3.28LVGTDD123 pKa = 4.08FGYY126 pKa = 10.58KK127 pKa = 8.59IHH129 pKa = 7.01LVYY132 pKa = 10.66GCQAAPSEE140 pKa = 4.53KK141 pKa = 10.27SRR143 pKa = 11.84STVNDD148 pKa = 3.36SPEE151 pKa = 3.65AATFSWEE158 pKa = 4.0LTTNPVPVAGINADD172 pKa = 3.16TGKK175 pKa = 9.83PYY177 pKa = 10.75RR178 pKa = 11.84PTAHH182 pKa = 5.59VTVDD186 pKa = 3.47STKK189 pKa = 10.35VSASALAALEE199 pKa = 4.44EE200 pKa = 4.31ILYY203 pKa = 8.44GTASEE208 pKa = 4.65DD209 pKa = 3.45PRR211 pKa = 11.84MPAPEE216 pKa = 4.16EE217 pKa = 3.85VLEE220 pKa = 4.17LVGDD224 pKa = 4.34ALTEE228 pKa = 4.14VTPMAATFDD237 pKa = 4.13APSDD241 pKa = 3.82TVTIPSQAGVVYY253 pKa = 10.48KK254 pKa = 10.54IGGVPVVAGDD264 pKa = 3.54RR265 pKa = 11.84VITVEE270 pKa = 4.13TTVMAEE276 pKa = 3.72AAIGYY281 pKa = 7.18SFPDD285 pKa = 3.68GVTTSWTFDD294 pKa = 3.54PAA296 pKa = 3.86

Molecular weight: 31.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5P8DC03|A0A5P8DC03_9CAUD Uncharacterized protein OS=Gordonia phage Tanis OX=2652415 GN=86 PE=4 SV=1
MM1 pKa = 7.69ASNKK5 pKa = 9.61RR6 pKa = 11.84KK7 pKa = 9.84YY8 pKa = 10.88GLFNFIVDD16 pKa = 3.62ITLSLLTGGLWLIWIFCRR34 pKa = 11.84EE35 pKa = 3.77MRR37 pKa = 11.84RR38 pKa = 3.48

Molecular weight: 4.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

93

0

93

18493

30

1704

198.8

22.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.598 ± 0.494

0.6 ± 0.088

6.289 ± 0.264

7.046 ± 0.395

3.553 ± 0.237

7.3 ± 0.43

1.903 ± 0.21

5.927 ± 0.275

5.889 ± 0.318

8.095 ± 0.352

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.828 ± 0.17

4.472 ± 0.162

3.974 ± 0.233

3.45 ± 0.166

4.948 ± 0.302

6.7 ± 0.23

6.3 ± 0.253

7.408 ± 0.238

1.314 ± 0.096

3.407 ± 0.284
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski