Junonia coenia densovirus (isolate pBRJ/1990) (JcDNV)

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae; Densovirinae; Ambidensovirus; Lepidopteran ambidensovirus 1; Junonia coenia densovirus

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q90053-2|CAPSD-2_JDNVP Isoform of Q90053 Isoform VP2 of Capsid protein VP1 OS=Junonia coenia densovirus (isolate pBRJ/1990) OX=648250 GN=VP PE=4 SV=1
MM1 pKa = 7.22QHH3 pKa = 7.19DD4 pKa = 5.37LDD6 pKa = 4.12NQIIACGEE14 pKa = 4.68DD15 pKa = 3.31IDD17 pKa = 4.49HH18 pKa = 6.43TLAMEE23 pKa = 4.49EE24 pKa = 4.49LEE26 pKa = 4.07HH27 pKa = 7.24WDD29 pKa = 2.94WTKK32 pKa = 11.08QNRR35 pKa = 11.84LPFQLYY41 pKa = 9.49LAVMHH46 pKa = 6.64LNEE49 pKa = 4.17IPEE52 pKa = 4.24WLDD55 pKa = 2.89EE56 pKa = 4.26TMLIEE61 pKa = 3.85CVYY64 pKa = 10.39YY65 pKa = 10.45FKK67 pKa = 11.1EE68 pKa = 4.67LINHH72 pKa = 6.96RR73 pKa = 11.84DD74 pKa = 3.5PYY76 pKa = 10.9DD77 pKa = 3.56TDD79 pKa = 4.78EE80 pKa = 4.42FNAWNMNGKK89 pKa = 8.73PFKK92 pKa = 10.53TMWKK96 pKa = 8.76ICKK99 pKa = 9.35FCYY102 pKa = 9.5TNCEE106 pKa = 4.11DD107 pKa = 3.9PDD109 pKa = 3.92EE110 pKa = 4.09YY111 pKa = 11.39RR112 pKa = 11.84FMYY115 pKa = 10.02NRR117 pKa = 11.84TVFVEE122 pKa = 4.08DD123 pKa = 4.35AEE125 pKa = 5.28DD126 pKa = 3.96IINRR130 pKa = 11.84LQDD133 pKa = 3.38GSSWCQICHH142 pKa = 6.19TCPLFNISVIYY153 pKa = 10.32EE154 pKa = 3.68NSPNKK159 pKa = 9.24KK160 pKa = 9.17RR161 pKa = 11.84RR162 pKa = 11.84YY163 pKa = 8.71SSSSEE168 pKa = 3.39EE169 pKa = 4.04DD170 pKa = 3.19EE171 pKa = 4.36YY172 pKa = 11.21MSNSFYY178 pKa = 11.24VKK180 pKa = 10.26HH181 pKa = 6.3PNSRR185 pKa = 11.84HH186 pKa = 4.18

Molecular weight: 22.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q90053-4|CAPSD-4_JDNVP Isoform of Q90053 Isoform VP4 of Capsid protein VP1 OS=Junonia coenia densovirus (isolate pBRJ/1990) OX=648250 GN=VP PE=4 SV=1
MM1 pKa = 7.58SLPGTGSGTSSGGGNTSGQEE21 pKa = 4.0VYY23 pKa = 10.71VIPRR27 pKa = 11.84PFSNFGKK34 pKa = 10.62KK35 pKa = 10.08LSTYY39 pKa = 7.81TKK41 pKa = 8.62SHH43 pKa = 6.28KK44 pKa = 10.63FMIFGLANNVIGPTGTGTTAVNRR67 pKa = 11.84LITTCLAEE75 pKa = 4.61IPWQKK80 pKa = 10.89LPLYY84 pKa = 8.6MNQSEE89 pKa = 4.69FDD91 pKa = 4.02LLPPGSRR98 pKa = 11.84VVEE101 pKa = 4.39CNVKK105 pKa = 10.69VIFRR109 pKa = 11.84TNRR112 pKa = 11.84IAFEE116 pKa = 4.15TSSTATKK123 pKa = 10.31QATLNQISNLQTAVGLNKK141 pKa = 10.33LGWGIDD147 pKa = 3.23RR148 pKa = 11.84SFTAFQSDD156 pKa = 3.51QPMIPTATSAPKK168 pKa = 10.21YY169 pKa = 10.12EE170 pKa = 5.64PITGTTGYY178 pKa = 10.42RR179 pKa = 11.84GMIADD184 pKa = 4.09YY185 pKa = 11.0YY186 pKa = 11.09GADD189 pKa = 3.73STNDD193 pKa = 3.38AAFGNAGNYY202 pKa = 7.38PHH204 pKa = 6.82HH205 pKa = 6.4QVGSFTFIQNYY216 pKa = 7.86YY217 pKa = 11.13CMYY220 pKa = 9.91QQTNQGTGGWPCLAEE235 pKa = 4.26HH236 pKa = 6.78LQQFDD241 pKa = 3.76SKK243 pKa = 9.86TVNNQCLIDD252 pKa = 3.78VTYY255 pKa = 9.34KK256 pKa = 10.87PKK258 pKa = 10.0MGLIKK263 pKa = 10.54PPLNYY268 pKa = 10.1KK269 pKa = 10.37IIGQPTAKK277 pKa = 9.41GTISVGDD284 pKa = 3.66NLVNMRR290 pKa = 11.84GAVVINPPEE299 pKa = 4.13ATQSVTEE306 pKa = 4.27STHH309 pKa = 5.8NLTRR313 pKa = 11.84NFPANLFNIYY323 pKa = 10.6SDD325 pKa = 3.59IEE327 pKa = 4.02KK328 pKa = 10.69SQILHH333 pKa = 6.25KK334 pKa = 10.78GPWGHH339 pKa = 6.63EE340 pKa = 3.99NPQIQPSVHH349 pKa = 7.13IGIQAVPALTTGALLVNSSPLNSWTDD375 pKa = 3.1SMGYY379 pKa = 8.99IDD381 pKa = 5.55VMSSCTVMEE390 pKa = 4.21SQPTHH395 pKa = 6.45FPFSTDD401 pKa = 2.82ANTNPGNTIYY411 pKa = 10.77RR412 pKa = 11.84INLTPNSLTSAFNGLYY428 pKa = 10.89GNGATLGNVV437 pKa = 3.2

Molecular weight: 47.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

3

7

3274

186

810

467.7

51.77

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.864 ± 0.543

1.374 ± 0.292

4.368 ± 0.56

5.192 ± 0.748

3.971 ± 0.419

7.697 ± 0.95

2.23 ± 0.182

5.987 ± 0.156

5.192 ± 0.487

6.964 ± 0.303

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.535 ± 0.228

7.575 ± 0.353

5.834 ± 0.497

4.673 ± 0.309

3.451 ± 0.654

8.308 ± 0.418

8.369 ± 0.813

4.918 ± 0.227

1.374 ± 0.265

4.032 ± 0.23
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski