Capybara microvirus Cap3_SP_646

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.69

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W907|A0A4P8W907_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_646 OX=2585487 PE=4 SV=1
MM1 pKa = 6.52FTIYY5 pKa = 10.43HH6 pKa = 5.98SLDD9 pKa = 3.14FASARR14 pKa = 11.84SRR16 pKa = 11.84IEE18 pKa = 4.01SNDD21 pKa = 3.31PGDD24 pKa = 3.94YY25 pKa = 10.51LVHH28 pKa = 7.54CEE30 pKa = 4.38DD31 pKa = 4.73FEE33 pKa = 5.32NINDD37 pKa = 3.85LVKK40 pKa = 10.76RR41 pKa = 11.84SLITRR46 pKa = 11.84DD47 pKa = 3.47SSCLFGRR54 pKa = 11.84DD55 pKa = 3.66PEE57 pKa = 4.5CFYY60 pKa = 11.66DD61 pKa = 5.76DD62 pKa = 4.87ALNDD66 pKa = 3.94PKK68 pKa = 11.19LQDD71 pKa = 4.28DD72 pKa = 4.62YY73 pKa = 11.35EE74 pKa = 4.73LSSKK78 pKa = 10.98ASASKK83 pKa = 10.31AAQQEE88 pKa = 4.33AKK90 pKa = 10.09ASSDD94 pKa = 3.26AAVDD98 pKa = 4.51LEE100 pKa = 4.54ANLDD104 pKa = 3.78NSVKK108 pKa = 10.58QVDD111 pKa = 3.24

Molecular weight: 12.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W6I7|A0A4P8W6I7_9VIRU Uncharacterized protein OS=Capybara microvirus Cap3_SP_646 OX=2585487 PE=4 SV=1
MM1 pKa = 7.78ACRR4 pKa = 11.84NYY6 pKa = 10.86AIFHH10 pKa = 6.23SDD12 pKa = 2.31RR13 pKa = 11.84GYY15 pKa = 10.83FYY17 pKa = 10.88APCGQCMEE25 pKa = 4.87CRR27 pKa = 11.84LKK29 pKa = 10.67DD30 pKa = 3.51LRR32 pKa = 11.84DD33 pKa = 3.07WYY35 pKa = 10.76VRR37 pKa = 11.84SRR39 pKa = 11.84FEE41 pKa = 4.19AKK43 pKa = 9.78CKK45 pKa = 9.7EE46 pKa = 4.17RR47 pKa = 11.84PFHH50 pKa = 6.63YY51 pKa = 10.17FLTLTYY57 pKa = 10.66DD58 pKa = 3.86DD59 pKa = 4.84EE60 pKa = 4.49NLPVDD65 pKa = 4.35GFASRR70 pKa = 11.84DD71 pKa = 3.63DD72 pKa = 3.11IKK74 pKa = 11.54AFFKK78 pKa = 10.59SLRR81 pKa = 11.84HH82 pKa = 5.45RR83 pKa = 11.84FEE85 pKa = 4.37GASIRR90 pKa = 11.84YY91 pKa = 7.6FATSDD96 pKa = 3.29YY97 pKa = 10.94GGKK100 pKa = 10.02LGRR103 pKa = 11.84AHH105 pKa = 6.31FHH107 pKa = 6.78AIVFSSVRR115 pKa = 11.84IFANSIFNVWQKK127 pKa = 11.13GFTKK131 pKa = 10.52LKK133 pKa = 9.87VLTPVSMRR141 pKa = 11.84YY142 pKa = 8.35CCKK145 pKa = 9.48YY146 pKa = 9.11TIKK149 pKa = 10.63KK150 pKa = 9.26RR151 pKa = 11.84DD152 pKa = 3.54LVGSEE157 pKa = 4.82GYY159 pKa = 10.44VNPRR163 pKa = 11.84AFFRR167 pKa = 11.84LVSKK171 pKa = 10.65HH172 pKa = 5.38YY173 pKa = 10.66GEE175 pKa = 5.12NGINYY180 pKa = 9.17FNGTDD185 pKa = 3.34NFVEE189 pKa = 4.05FDD191 pKa = 3.49GKK193 pKa = 10.95KK194 pKa = 10.41FGWPQYY200 pKa = 10.57LIDD203 pKa = 5.57KK204 pKa = 9.98IVQNGLDD211 pKa = 3.45PHH213 pKa = 7.04LVFDD217 pKa = 4.48KK218 pKa = 10.83EE219 pKa = 3.92ATKK222 pKa = 10.22FYY224 pKa = 9.48KK225 pKa = 9.96TYY227 pKa = 10.75RR228 pKa = 11.84EE229 pKa = 3.74ASYY232 pKa = 11.55ACLSFVKK239 pKa = 10.41QNNLRR244 pKa = 11.84QLSGDD249 pKa = 3.59DD250 pKa = 6.14LYY252 pKa = 11.83NEE254 pKa = 4.27WNGGLRR260 pKa = 11.84RR261 pKa = 11.84AA262 pKa = 4.38

Molecular weight: 30.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1313

111

535

262.6

29.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.54 ± 1.607

1.447 ± 0.545

6.931 ± 1.237

4.417 ± 0.485

6.321 ± 0.909

7.007 ± 1.068

1.828 ± 0.531

4.646 ± 0.653

5.788 ± 1.197

8.225 ± 0.381

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.828 ± 0.313

6.55 ± 0.872

3.503 ± 0.927

3.58 ± 0.43

5.56 ± 0.742

8.759 ± 1.124

4.646 ± 0.613

5.712 ± 0.273

1.219 ± 0.275

4.494 ± 0.677
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski