Amino acid dipepetide frequency for Winged bean alphaendornavirus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.808AlaAla: 4.808 ± 0.0
1.045AlaCys: 1.045 ± 0.0
3.344AlaAsp: 3.344 ± 0.0
2.299AlaGlu: 2.299 ± 0.0
0.627AlaPhe: 0.627 ± 0.0
2.299AlaGly: 2.299 ± 0.0
1.881AlaHis: 1.881 ± 0.0
5.017AlaIle: 5.017 ± 0.0
4.599AlaLys: 4.599 ± 0.0
5.435AlaLeu: 5.435 ± 0.0
2.299AlaMet: 2.299 ± 0.0
4.599AlaAsn: 4.599 ± 0.0
1.881AlaPro: 1.881 ± 0.0
1.254AlaGln: 1.254 ± 0.0
2.926AlaArg: 2.926 ± 0.0
2.926AlaSer: 2.926 ± 0.0
4.599AlaThr: 4.599 ± 0.0
3.554AlaVal: 3.554 ± 0.0
0.627AlaTrp: 0.627 ± 0.0
1.254AlaTyr: 1.254 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.045CysAla: 1.045 ± 0.0
1.254CysCys: 1.254 ± 0.0
1.254CysAsp: 1.254 ± 0.0
0.627CysGlu: 0.627 ± 0.0
1.254CysPhe: 1.254 ± 0.0
2.09CysGly: 2.09 ± 0.0
0.627CysHis: 0.627 ± 0.0
1.045CysIle: 1.045 ± 0.0
2.508CysLys: 2.508 ± 0.0
1.672CysLeu: 1.672 ± 0.0
0.418CysMet: 0.418 ± 0.0
0.627CysAsn: 0.627 ± 0.0
1.045CysPro: 1.045 ± 0.0
1.254CysGln: 1.254 ± 0.0
0.836CysArg: 0.836 ± 0.0
0.836CysSer: 0.836 ± 0.0
1.672CysThr: 1.672 ± 0.0
1.672CysVal: 1.672 ± 0.0
0.209CysTrp: 0.209 ± 0.0
0.209CysTyr: 0.209 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.763AspAla: 3.763 ± 0.0
0.836AspCys: 0.836 ± 0.0
4.599AspAsp: 4.599 ± 0.0
3.554AspGlu: 3.554 ± 0.0
1.045AspPhe: 1.045 ± 0.0
3.554AspGly: 3.554 ± 0.0
1.254AspHis: 1.254 ± 0.0
4.181AspIle: 4.181 ± 0.0
1.254AspLys: 1.254 ± 0.0
7.525AspLeu: 7.525 ± 0.0
1.254AspMet: 1.254 ± 0.0
2.508AspAsn: 2.508 ± 0.0
1.463AspPro: 1.463 ± 0.0
2.717AspGln: 2.717 ± 0.0
1.045AspArg: 1.045 ± 0.0
2.926AspSer: 2.926 ± 0.0
4.39AspThr: 4.39 ± 0.0
6.271AspVal: 6.271 ± 0.0
1.672AspTrp: 1.672 ± 0.0
1.881AspTyr: 1.881 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.135GluAla: 3.135 ± 0.0
2.926GluCys: 2.926 ± 0.0
1.881GluAsp: 1.881 ± 0.0
3.135GluGlu: 3.135 ± 0.0
2.299GluPhe: 2.299 ± 0.0
2.508GluGly: 2.508 ± 0.0
1.881GluHis: 1.881 ± 0.0
3.554GluIle: 3.554 ± 0.0
2.717GluLys: 2.717 ± 0.0
6.271GluLeu: 6.271 ± 0.0
2.508GluMet: 2.508 ± 0.0
1.881GluAsn: 1.881 ± 0.0
3.344GluPro: 3.344 ± 0.0
3.344GluGln: 3.344 ± 0.0
1.463GluArg: 1.463 ± 0.0
2.926GluSer: 2.926 ± 0.0
6.062GluThr: 6.062 ± 0.0
3.135GluVal: 3.135 ± 0.0
1.045GluTrp: 1.045 ± 0.0
2.09GluTyr: 2.09 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
1.045PheAla: 1.045 ± 0.0
1.463PheCys: 1.463 ± 0.0
2.09PheAsp: 2.09 ± 0.0
2.299PheGlu: 2.299 ± 0.0
0.418PhePhe: 0.418 ± 0.0
2.299PheGly: 2.299 ± 0.0
0.627PheHis: 0.627 ± 0.0
1.881PheIle: 1.881 ± 0.0
2.299PheLys: 2.299 ± 0.0
1.672PheLeu: 1.672 ± 0.0
0.836PheMet: 0.836 ± 0.0
2.508PheAsn: 2.508 ± 0.0
0.836PhePro: 0.836 ± 0.0
1.254PheGln: 1.254 ± 0.0
1.881PheArg: 1.881 ± 0.0
1.254PheSer: 1.254 ± 0.0
1.881PheThr: 1.881 ± 0.0
2.717PheVal: 2.717 ± 0.0
0.836PheTrp: 0.836 ± 0.0
0.418PheTyr: 0.418 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
2.299GlyAla: 2.299 ± 0.0
0.627GlyCys: 0.627 ± 0.0
4.39GlyAsp: 4.39 ± 0.0
1.254GlyGlu: 1.254 ± 0.0
1.254GlyPhe: 1.254 ± 0.0
2.508GlyGly: 2.508 ± 0.0
1.254GlyHis: 1.254 ± 0.0
2.299GlyIle: 2.299 ± 0.0
3.554GlyLys: 3.554 ± 0.0
5.017GlyLeu: 5.017 ± 0.0
1.463GlyMet: 1.463 ± 0.0
1.881GlyAsn: 1.881 ± 0.0
1.672GlyPro: 1.672 ± 0.0
0.836GlyGln: 0.836 ± 0.0
2.09GlyArg: 2.09 ± 0.0
3.554GlySer: 3.554 ± 0.0
3.763GlyThr: 3.763 ± 0.0
4.808GlyVal: 4.808 ± 0.0
0.836GlyTrp: 0.836 ± 0.0
1.672GlyTyr: 1.672 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
2.299HisAla: 2.299 ± 0.0
0.836HisCys: 0.836 ± 0.0
1.463HisAsp: 1.463 ± 0.0
1.881HisGlu: 1.881 ± 0.0
1.045HisPhe: 1.045 ± 0.0
1.881HisGly: 1.881 ± 0.0
1.045HisHis: 1.045 ± 0.0
2.926HisIle: 2.926 ± 0.0
2.09HisLys: 2.09 ± 0.0
2.926HisLeu: 2.926 ± 0.0
0.836HisMet: 0.836 ± 0.0
2.508HisAsn: 2.508 ± 0.0
1.045HisPro: 1.045 ± 0.0
1.045HisGln: 1.045 ± 0.0
1.254HisArg: 1.254 ± 0.0
1.672HisSer: 1.672 ± 0.0
1.672HisThr: 1.672 ± 0.0
1.881HisVal: 1.881 ± 0.0
0.836HisTrp: 0.836 ± 0.0
0.418HisTyr: 0.418 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.763IleAla: 3.763 ± 0.0
0.627IleCys: 0.627 ± 0.0
3.763IleAsp: 3.763 ± 0.0
5.644IleGlu: 5.644 ± 0.0
1.672IlePhe: 1.672 ± 0.0
4.181IleGly: 4.181 ± 0.0
1.881IleHis: 1.881 ± 0.0
2.508IleIle: 2.508 ± 0.0
5.435IleLys: 5.435 ± 0.0
5.644IleLeu: 5.644 ± 0.0
2.09IleMet: 2.09 ± 0.0
4.808IleAsn: 4.808 ± 0.0
3.135IlePro: 3.135 ± 0.0
2.09IleGln: 2.09 ± 0.0
2.508IleArg: 2.508 ± 0.0
3.554IleSer: 3.554 ± 0.0
3.344IleThr: 3.344 ± 0.0
4.808IleVal: 4.808 ± 0.0
0.418IleTrp: 0.418 ± 0.0
1.254IleTyr: 1.254 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
2.926LysAla: 2.926 ± 0.0
0.0LysCys: 0.0 ± 0.0
2.299LysAsp: 2.299 ± 0.0
2.926LysGlu: 2.926 ± 0.0
1.881LysPhe: 1.881 ± 0.0
2.299LysGly: 2.299 ± 0.0
2.926LysHis: 2.926 ± 0.0
4.181LysIle: 4.181 ± 0.0
2.508LysLys: 2.508 ± 0.0
12.751LysLeu: 12.751 ± 0.0
1.463LysMet: 1.463 ± 0.0
2.508LysAsn: 2.508 ± 0.0
2.717LysPro: 2.717 ± 0.0
2.299LysGln: 2.299 ± 0.0
2.09LysArg: 2.09 ± 0.0
2.926LysSer: 2.926 ± 0.0
5.853LysThr: 5.853 ± 0.0
3.554LysVal: 3.554 ± 0.0
1.672LysTrp: 1.672 ± 0.0
3.344LysTyr: 3.344 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
6.062LeuAla: 6.062 ± 0.0
2.717LeuCys: 2.717 ± 0.0
5.226LeuAsp: 5.226 ± 0.0
6.689LeuGlu: 6.689 ± 0.0
2.508LeuPhe: 2.508 ± 0.0
6.48LeuGly: 6.48 ± 0.0
1.881LeuHis: 1.881 ± 0.0
4.808LeuIle: 4.808 ± 0.0
8.152LeuLys: 8.152 ± 0.0
6.48LeuLeu: 6.48 ± 0.0
3.135LeuMet: 3.135 ± 0.0
5.644LeuAsn: 5.644 ± 0.0
3.135LeuPro: 3.135 ± 0.0
4.181LeuGln: 4.181 ± 0.0
5.017LeuArg: 5.017 ± 0.0
7.943LeuSer: 7.943 ± 0.0
9.406LeuThr: 9.406 ± 0.0
6.062LeuVal: 6.062 ± 0.0
1.254LeuTrp: 1.254 ± 0.0
2.926LeuTyr: 2.926 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.672MetAla: 1.672 ± 0.0
0.836MetCys: 0.836 ± 0.0
0.627MetAsp: 0.627 ± 0.0
2.508MetGlu: 2.508 ± 0.0
1.045MetPhe: 1.045 ± 0.0
1.672MetGly: 1.672 ± 0.0
0.836MetHis: 0.836 ± 0.0
2.09MetIle: 2.09 ± 0.0
1.254MetLys: 1.254 ± 0.0
2.926MetLeu: 2.926 ± 0.0
0.627MetMet: 0.627 ± 0.0
1.045MetAsn: 1.045 ± 0.0
0.627MetPro: 0.627 ± 0.0
1.672MetGln: 1.672 ± 0.0
1.045MetArg: 1.045 ± 0.0
2.09MetSer: 2.09 ± 0.0
2.717MetThr: 2.717 ± 0.0
3.135MetVal: 3.135 ± 0.0
0.836MetTrp: 0.836 ± 0.0
0.836MetTyr: 0.836 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.135AsnAla: 3.135 ± 0.0
1.672AsnCys: 1.672 ± 0.0
4.181AsnAsp: 4.181 ± 0.0
2.926AsnGlu: 2.926 ± 0.0
2.717AsnPhe: 2.717 ± 0.0
1.254AsnGly: 1.254 ± 0.0
2.09AsnHis: 2.09 ± 0.0
4.39AsnIle: 4.39 ± 0.0
4.808AsnLys: 4.808 ± 0.0
6.689AsnLeu: 6.689 ± 0.0
1.672AsnMet: 1.672 ± 0.0
4.39AsnAsn: 4.39 ± 0.0
2.09AsnPro: 2.09 ± 0.0
3.135AsnGln: 3.135 ± 0.0
2.926AsnArg: 2.926 ± 0.0
3.344AsnSer: 3.344 ± 0.0
4.599AsnThr: 4.599 ± 0.0
3.135AsnVal: 3.135 ± 0.0
1.045AsnTrp: 1.045 ± 0.0
2.717AsnTyr: 2.717 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.045ProAla: 1.045 ± 0.0
0.836ProCys: 0.836 ± 0.0
2.717ProAsp: 2.717 ± 0.0
2.299ProGlu: 2.299 ± 0.0
1.672ProPhe: 1.672 ± 0.0
1.463ProGly: 1.463 ± 0.0
1.045ProHis: 1.045 ± 0.0
2.299ProIle: 2.299 ± 0.0
2.508ProLys: 2.508 ± 0.0
3.763ProLeu: 3.763 ± 0.0
1.045ProMet: 1.045 ± 0.0
2.926ProAsn: 2.926 ± 0.0
1.045ProPro: 1.045 ± 0.0
1.045ProGln: 1.045 ± 0.0
0.836ProArg: 0.836 ± 0.0
1.672ProSer: 1.672 ± 0.0
3.344ProThr: 3.344 ± 0.0
3.763ProVal: 3.763 ± 0.0
0.836ProTrp: 0.836 ± 0.0
0.627ProTyr: 0.627 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.09GlnAla: 2.09 ± 0.0
1.045GlnCys: 1.045 ± 0.0
1.881GlnAsp: 1.881 ± 0.0
1.881GlnGlu: 1.881 ± 0.0
1.463GlnPhe: 1.463 ± 0.0
0.627GlnGly: 0.627 ± 0.0
1.881GlnHis: 1.881 ± 0.0
3.344GlnIle: 3.344 ± 0.0
1.881GlnLys: 1.881 ± 0.0
4.181GlnLeu: 4.181 ± 0.0
0.627GlnMet: 0.627 ± 0.0
2.299GlnAsn: 2.299 ± 0.0
2.09GlnPro: 2.09 ± 0.0
1.881GlnGln: 1.881 ± 0.0
2.299GlnArg: 2.299 ± 0.0
1.672GlnSer: 1.672 ± 0.0
3.972GlnThr: 3.972 ± 0.0
1.672GlnVal: 1.672 ± 0.0
1.045GlnTrp: 1.045 ± 0.0
0.627GlnTyr: 0.627 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.926ArgAla: 2.926 ± 0.0
0.418ArgCys: 0.418 ± 0.0
1.881ArgAsp: 1.881 ± 0.0
1.672ArgGlu: 1.672 ± 0.0
1.881ArgPhe: 1.881 ± 0.0
1.045ArgGly: 1.045 ± 0.0
1.881ArgHis: 1.881 ± 0.0
3.135ArgIle: 3.135 ± 0.0
2.717ArgLys: 2.717 ± 0.0
5.435ArgLeu: 5.435 ± 0.0
0.627ArgMet: 0.627 ± 0.0
3.972ArgAsn: 3.972 ± 0.0
2.299ArgPro: 2.299 ± 0.0
0.836ArgGln: 0.836 ± 0.0
3.763ArgArg: 3.763 ± 0.0
2.299ArgSer: 2.299 ± 0.0
1.254ArgThr: 1.254 ± 0.0
2.299ArgVal: 2.299 ± 0.0
0.836ArgTrp: 0.836 ± 0.0
2.299ArgTyr: 2.299 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
4.39SerAla: 4.39 ± 0.0
1.045SerCys: 1.045 ± 0.0
4.39SerAsp: 4.39 ± 0.0
3.554SerGlu: 3.554 ± 0.0
2.09SerPhe: 2.09 ± 0.0
1.881SerGly: 1.881 ± 0.0
1.254SerHis: 1.254 ± 0.0
2.508SerIle: 2.508 ± 0.0
2.717SerLys: 2.717 ± 0.0
4.39SerLeu: 4.39 ± 0.0
3.554SerMet: 3.554 ± 0.0
3.763SerAsn: 3.763 ± 0.0
1.881SerPro: 1.881 ± 0.0
2.09SerGln: 2.09 ± 0.0
2.508SerArg: 2.508 ± 0.0
2.299SerSer: 2.299 ± 0.0
5.017SerThr: 5.017 ± 0.0
4.599SerVal: 4.599 ± 0.0
1.045SerTrp: 1.045 ± 0.0
1.881SerTyr: 1.881 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.554ThrAla: 3.554 ± 0.0
1.881ThrCys: 1.881 ± 0.0
3.763ThrAsp: 3.763 ± 0.0
4.181ThrGlu: 4.181 ± 0.0
2.508ThrPhe: 2.508 ± 0.0
3.135ThrGly: 3.135 ± 0.0
2.09ThrHis: 2.09 ± 0.0
6.271ThrIle: 6.271 ± 0.0
5.017ThrLys: 5.017 ± 0.0
6.48ThrLeu: 6.48 ± 0.0
2.09ThrMet: 2.09 ± 0.0
6.48ThrAsn: 6.48 ± 0.0
3.554ThrPro: 3.554 ± 0.0
3.135ThrGln: 3.135 ± 0.0
2.926ThrArg: 2.926 ± 0.0
4.599ThrSer: 4.599 ± 0.0
6.271ThrThr: 6.271 ± 0.0
6.898ThrVal: 6.898 ± 0.0
0.627ThrTrp: 0.627 ± 0.0
2.926ThrTyr: 2.926 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.017ValAla: 5.017 ± 0.0
0.836ValCys: 0.836 ± 0.0
4.599ValAsp: 4.599 ± 0.0
5.644ValGlu: 5.644 ± 0.0
1.463ValPhe: 1.463 ± 0.0
3.135ValGly: 3.135 ± 0.0
2.926ValHis: 2.926 ± 0.0
4.181ValIle: 4.181 ± 0.0
3.763ValLys: 3.763 ± 0.0
6.062ValLeu: 6.062 ± 0.0
1.881ValMet: 1.881 ± 0.0
5.017ValAsn: 5.017 ± 0.0
1.045ValPro: 1.045 ± 0.0
2.508ValGln: 2.508 ± 0.0
3.554ValArg: 3.554 ± 0.0
5.017ValSer: 5.017 ± 0.0
7.107ValThr: 7.107 ± 0.0
4.808ValVal: 4.808 ± 0.0
1.254ValTrp: 1.254 ± 0.0
2.09ValTyr: 2.09 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.209TrpAla: 0.209 ± 0.0
0.418TrpCys: 0.418 ± 0.0
0.627TrpAsp: 0.627 ± 0.0
0.836TrpGlu: 0.836 ± 0.0
0.627TrpPhe: 0.627 ± 0.0
0.418TrpGly: 0.418 ± 0.0
0.627TrpHis: 0.627 ± 0.0
1.045TrpIle: 1.045 ± 0.0
1.463TrpLys: 1.463 ± 0.0
2.09TrpLeu: 2.09 ± 0.0
0.836TrpMet: 0.836 ± 0.0
1.672TrpAsn: 1.672 ± 0.0
0.418TrpPro: 0.418 ± 0.0
0.836TrpGln: 0.836 ± 0.0
1.045TrpArg: 1.045 ± 0.0
0.627TrpSer: 0.627 ± 0.0
0.627TrpThr: 0.627 ± 0.0
0.836TrpVal: 0.836 ± 0.0
0.836TrpTrp: 0.836 ± 0.0
1.672TrpTyr: 1.672 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.09TyrAla: 2.09 ± 0.0
0.836TyrCys: 0.836 ± 0.0
2.717TyrAsp: 2.717 ± 0.0
2.299TyrGlu: 2.299 ± 0.0
1.045TyrPhe: 1.045 ± 0.0
2.299TyrGly: 2.299 ± 0.0
1.672TyrHis: 1.672 ± 0.0
1.463TyrIle: 1.463 ± 0.0
2.09TyrLys: 2.09 ± 0.0
2.299TyrLeu: 2.299 ± 0.0
0.627TyrMet: 0.627 ± 0.0
1.881TyrAsn: 1.881 ± 0.0
1.463TyrPro: 1.463 ± 0.0
1.045TyrGln: 1.045 ± 0.0
1.463TyrArg: 1.463 ± 0.0
2.717TyrSer: 2.717 ± 0.0
0.836TyrThr: 0.836 ± 0.0
2.299TyrVal: 2.299 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
1.881TyrTyr: 1.881 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (4785 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski