Capybara microvirus Cap1_SP_84

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W408|A0A4P8W408_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_84 OX=2584795 PE=4 SV=1
MM1 pKa = 7.54LVTKK5 pKa = 10.51QFTDD9 pKa = 3.57EE10 pKa = 4.22SRR12 pKa = 11.84CAQLIGSHH20 pKa = 5.53NHH22 pKa = 6.92DD23 pKa = 4.45DD24 pKa = 3.64SLIYY28 pKa = 10.72VPSKK32 pKa = 10.51FMKK35 pKa = 10.48GDD37 pKa = 3.6VEE39 pKa = 4.65SVSLNSDD46 pKa = 2.83IVGYY50 pKa = 10.92ASDD53 pKa = 4.81FSLEE57 pKa = 4.06SLQAAGVDD65 pKa = 3.74PGSIAPNLSTDD76 pKa = 3.4RR77 pKa = 11.84TRR79 pKa = 11.84PNMDD83 pKa = 3.44KK84 pKa = 10.85EE85 pKa = 4.25VDD87 pKa = 3.46LSSFAEE93 pKa = 4.34SLSSLQVDD101 pKa = 3.96DD102 pKa = 5.7DD103 pKa = 4.33LPEE106 pKa = 3.84

Molecular weight: 11.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W4B0|A0A4P8W4B0_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_84 OX=2584795 PE=4 SV=1
MM1 pKa = 7.11QATITFSNRR10 pKa = 11.84KK11 pKa = 9.52KK12 pKa = 10.86EE13 pKa = 4.05DD14 pKa = 3.65FNPLFDD20 pKa = 4.18RR21 pKa = 11.84EE22 pKa = 4.61KK23 pKa = 9.84ITIQNRR29 pKa = 11.84RR30 pKa = 11.84LLKK33 pKa = 10.35FQAAVQGGYY42 pKa = 6.58EE43 pKa = 3.58TRR45 pKa = 11.84MYY47 pKa = 10.98YY48 pKa = 10.32EE49 pKa = 4.35YY50 pKa = 10.99LNCIDD55 pKa = 4.02KK56 pKa = 11.14GGFVAFVTLTYY67 pKa = 10.92NNKK70 pKa = 9.91ALYY73 pKa = 9.57HH74 pKa = 6.27FYY76 pKa = 10.97GLPVPDD82 pKa = 4.16SRR84 pKa = 11.84NLRR87 pKa = 11.84YY88 pKa = 9.62LLHH91 pKa = 7.34DD92 pKa = 3.47SYY94 pKa = 11.16FAHH97 pKa = 6.51EE98 pKa = 4.62CARR101 pKa = 11.84SGYY104 pKa = 7.86NFKK107 pKa = 11.17YY108 pKa = 10.4FITTEE113 pKa = 3.93LGEE116 pKa = 4.56GKK118 pKa = 10.31GKK120 pKa = 10.51RR121 pKa = 11.84GFANNPHH128 pKa = 5.38YY129 pKa = 10.8HH130 pKa = 6.46CLLYY134 pKa = 8.03FTPSTPEE141 pKa = 3.52YY142 pKa = 10.25NRR144 pKa = 11.84FFITRR149 pKa = 11.84YY150 pKa = 8.92VDD152 pKa = 4.57LIKK155 pKa = 10.69KK156 pKa = 8.35YY157 pKa = 8.1WQGDD161 pKa = 3.37NGEE164 pKa = 4.56DD165 pKa = 2.88WNAAKK170 pKa = 10.24FGHH173 pKa = 5.99VEE175 pKa = 3.77PGDD178 pKa = 3.33NYY180 pKa = 11.32GIVNSSSAFSYY191 pKa = 9.03VSKK194 pKa = 10.99YY195 pKa = 6.57VTKK198 pKa = 10.67SSTDD202 pKa = 2.77IHH204 pKa = 6.94RR205 pKa = 11.84EE206 pKa = 3.74RR207 pKa = 11.84IVAARR212 pKa = 11.84SKK214 pKa = 10.21EE215 pKa = 4.02YY216 pKa = 9.41WSKK219 pKa = 11.0ILDD222 pKa = 3.9PCSSEE227 pKa = 5.02FKK229 pKa = 11.16VLDD232 pKa = 3.43IKK234 pKa = 11.49LNDD237 pKa = 4.86LIKK240 pKa = 10.82ADD242 pKa = 3.28INKK245 pKa = 8.97YY246 pKa = 10.15RR247 pKa = 11.84NLFGTRR253 pKa = 11.84VRR255 pKa = 11.84CSHH258 pKa = 6.38GFGQIDD264 pKa = 3.65EE265 pKa = 4.45TLLTFIHH272 pKa = 7.09DD273 pKa = 3.87KK274 pKa = 10.74PHH276 pKa = 7.12IKK278 pKa = 9.17LTSNGKK284 pKa = 8.25LTYY287 pKa = 10.18KK288 pKa = 10.45PLPLYY293 pKa = 10.4NYY295 pKa = 8.84RR296 pKa = 11.84KK297 pKa = 9.79LYY299 pKa = 9.99MYY301 pKa = 10.91VDD303 pKa = 3.47EE304 pKa = 4.65NKK306 pKa = 10.25CYY308 pKa = 10.52KK309 pKa = 10.54LNEE312 pKa = 4.04AGIEE316 pKa = 4.18LKK318 pKa = 10.62CRR320 pKa = 11.84QVSSALKK327 pKa = 10.83DD328 pKa = 3.47MADD331 pKa = 3.57NAQLICRR338 pKa = 11.84NTLSCCEE345 pKa = 4.12VFSLLPSPLDD355 pKa = 3.34LSTYY359 pKa = 9.78IQQCNCKK366 pKa = 10.09LGEE369 pKa = 4.17SPLFHH374 pKa = 7.86DD375 pKa = 4.07YY376 pKa = 11.6ALYY379 pKa = 9.59TLLYY383 pKa = 8.8KK384 pKa = 10.87DD385 pKa = 3.92RR386 pKa = 11.84MYY388 pKa = 10.78PSWPSGEE395 pKa = 4.73FFDD398 pKa = 5.79EE399 pKa = 4.32PDD401 pKa = 4.15IDD403 pKa = 3.79PLSYY407 pKa = 10.03IRR409 pKa = 11.84QVSSRR414 pKa = 11.84VDD416 pKa = 3.0KK417 pKa = 11.23NSYY420 pKa = 9.18FFCSDD425 pKa = 3.63CAHH428 pKa = 7.26LLPYY432 pKa = 9.89KK433 pKa = 8.98YY434 pKa = 9.96HH435 pKa = 5.95SRR437 pKa = 11.84FRR439 pKa = 11.84FNLPFFSAIDD449 pKa = 3.68SVLSHH454 pKa = 6.21HH455 pKa = 7.44TIQTDD460 pKa = 3.29EE461 pKa = 4.82KK462 pKa = 9.47LTQEE466 pKa = 3.76HH467 pKa = 6.28EE468 pKa = 3.78LRR470 pKa = 11.84KK471 pKa = 9.89RR472 pKa = 11.84IRR474 pKa = 11.84NSVLAQRR481 pKa = 11.84KK482 pKa = 8.05PFLFHH487 pKa = 7.16SYY489 pKa = 10.38KK490 pKa = 10.83

Molecular weight: 57.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1678

78

603

335.6

38.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.555 ± 1.232

1.192 ± 0.581

6.436 ± 0.543

5.959 ± 0.879

5.662 ± 0.639

5.304 ± 0.724

2.086 ± 0.52

4.41 ± 0.26

5.9 ± 0.636

9.178 ± 0.368

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.907 ± 0.328

7.032 ± 1.056

3.456 ± 0.508

4.529 ± 1.176

5.304 ± 0.482

8.522 ± 0.66

4.768 ± 0.601

5.662 ± 0.848

1.073 ± 0.287

5.066 ± 1.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski