Oleiphilus sp. HI0043

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Oleiphilaceae; Oleiphilus; unclassified Oleiphilus

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3862 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A657ALE5|A0A657ALE5_9GAMM Siroheme decarboxylase OS=Oleiphilus sp. HI0043 OX=1822233 GN=A3729_17415 PE=3 SV=1
MM1 pKa = 7.43KK2 pKa = 10.36KK3 pKa = 10.26IIALLLISAGLTGCGGVGSLVSNDD27 pKa = 3.24RR28 pKa = 11.84VTDD31 pKa = 3.73ADD33 pKa = 3.48NDD35 pKa = 3.87QVVTIGDD42 pKa = 4.11SIFALSGKK50 pKa = 9.38IQDD53 pKa = 3.78ILEE56 pKa = 4.67DD57 pKa = 3.77YY58 pKa = 10.88AGEE61 pKa = 4.22TFRR64 pKa = 11.84QYY66 pKa = 10.31TISGAEE72 pKa = 3.92VTGGIYY78 pKa = 9.61ATDD81 pKa = 3.22IATQFEE87 pKa = 4.38IAKK90 pKa = 9.76NDD92 pKa = 3.48NPNIQTIVMDD102 pKa = 4.27AAGNDD107 pKa = 3.18ILIPIITMFDD117 pKa = 3.1WYY119 pKa = 10.85NCKK122 pKa = 9.52TEE124 pKa = 3.99WYY126 pKa = 8.45QWWGLSSSCKK136 pKa = 10.49NLIDD140 pKa = 4.33DD141 pKa = 5.28LYY143 pKa = 11.06VDD145 pKa = 5.14VVNLLNNIDD154 pKa = 3.8ANGVEE159 pKa = 4.28NVIFLGYY166 pKa = 9.86YY167 pKa = 8.3YY168 pKa = 9.95PKK170 pKa = 10.72NALLWLDD177 pKa = 3.97DD178 pKa = 3.63VEE180 pKa = 4.45EE181 pKa = 4.23AVDD184 pKa = 3.74YY185 pKa = 11.54GDD187 pKa = 3.63MRR189 pKa = 11.84LAQACANSTANCTFIDD205 pKa = 4.05PRR207 pKa = 11.84SVINDD212 pKa = 3.28RR213 pKa = 11.84DD214 pKa = 3.77IIIDD218 pKa = 4.91GIHH221 pKa = 7.0PATSGSQKK229 pKa = 10.44LADD232 pKa = 5.42LIWPVLQPMLL242 pKa = 4.39

Molecular weight: 26.58 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A657AMG7|A0A657AMG7_9GAMM Uncharacterized protein OS=Oleiphilus sp. HI0043 OX=1822233 GN=A3729_10500 PE=4 SV=1
DDD2 pKa = 3.93QGNALSWATAGGSGFRR18 pKa = 11.84GSRR21 pKa = 11.84KKK23 pKa = 8.26TPFAAQVAAEEE34 pKa = 4.14AGNAAAEEE42 pKa = 4.17YY43 pKa = 10.13LKKK46 pKa = 10.41LEEE49 pKa = 4.27QVKKK53 pKa = 9.85PGPGRR58 pKa = 11.84EEE60 pKa = 4.07AVRR63 pKa = 11.84ALNACGYYY71 pKa = 9.79KK72 pKa = 8.73TNITDDD78 pKa = 3.31TPIPHHH84 pKa = 6.41GCRR87 pKa = 11.84PPKKK91 pKa = 9.7KK92 pKa = 10.01RR93 pKa = 11.84V

Molecular weight: 9.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3862

0

3862

1195953

45

4321

309.7

34.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.415 ± 0.034

1.053 ± 0.013

5.85 ± 0.055

6.906 ± 0.041

4.022 ± 0.028

6.751 ± 0.044

2.193 ± 0.022

6.372 ± 0.033

5.63 ± 0.047

10.53 ± 0.05

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.42 ± 0.024

4.075 ± 0.03

3.827 ± 0.024

4.239 ± 0.028

4.568 ± 0.032

7.485 ± 0.044

4.932 ± 0.044

6.636 ± 0.035

1.097 ± 0.013

2.996 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski