[Candida] haemuloni

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora; Clavispora/Candida clade

Average proteome isoelectric point is 6.25

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5240 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2V1ATU0|A0A2V1ATU0_9ASCO Transcription initiation factor IIF subunit beta OS=[Candida] haemuloni OX=45357 GN=CXQ85_000149 PE=3 SV=1
MM1 pKa = 7.82KK2 pKa = 10.28YY3 pKa = 10.21LALALIASTVAADD16 pKa = 4.1RR17 pKa = 11.84YY18 pKa = 10.48KK19 pKa = 11.02LYY21 pKa = 11.08AEE23 pKa = 4.57TDD25 pKa = 3.25NEE27 pKa = 4.29EE28 pKa = 4.31YY29 pKa = 10.47NGKK32 pKa = 9.41GLYY35 pKa = 9.98ANKK38 pKa = 9.62EE39 pKa = 3.99ARR41 pKa = 11.84SGLDD45 pKa = 3.23YY46 pKa = 11.54VFLNDD51 pKa = 3.61NPIGLEE57 pKa = 3.77YY58 pKa = 10.87DD59 pKa = 3.88EE60 pKa = 5.49EE61 pKa = 4.24DD62 pKa = 4.23HH63 pKa = 7.18EE64 pKa = 5.3LEE66 pKa = 4.27GWDD69 pKa = 3.54SKK71 pKa = 10.96MAVLGQYY78 pKa = 11.0LVMASRR84 pKa = 11.84GDD86 pKa = 3.44GDD88 pKa = 4.63SNVAIADD95 pKa = 3.68NYY97 pKa = 10.32LQLSAKK103 pKa = 8.64TWACKK108 pKa = 8.82ATQDD112 pKa = 3.55PNGYY116 pKa = 9.86DD117 pKa = 3.26RR118 pKa = 11.84SNLVYY123 pKa = 10.89VNEE126 pKa = 4.18TQPYY130 pKa = 7.92EE131 pKa = 4.16DD132 pKa = 3.88CAEE135 pKa = 3.77VRR137 pKa = 11.84FRR139 pKa = 11.84AEE141 pKa = 3.99KK142 pKa = 10.74EE143 pKa = 3.75GDD145 pKa = 3.37GDD147 pKa = 4.47GDD149 pKa = 3.98GDD151 pKa = 4.55GDD153 pKa = 4.55GDD155 pKa = 4.55GDD157 pKa = 4.55GDD159 pKa = 4.55GDD161 pKa = 4.55GDD163 pKa = 4.55GDD165 pKa = 4.55GDD167 pKa = 4.55GDD169 pKa = 4.55GDD171 pKa = 4.55GDD173 pKa = 4.55GDD175 pKa = 4.55GDD177 pKa = 4.55GDD179 pKa = 4.55GDD181 pKa = 4.46GDD183 pKa = 5.07GDD185 pKa = 5.4GDD187 pKa = 6.07DD188 pKa = 6.13DD189 pKa = 7.07DD190 pKa = 7.68DD191 pKa = 7.51DD192 pKa = 6.46DD193 pKa = 5.27DD194 pKa = 4.48HH195 pKa = 6.71HH196 pKa = 7.05TPTPSLPTGGWNHH209 pKa = 5.57TTTTTTLTDD218 pKa = 3.41YY219 pKa = 7.55TTYY222 pKa = 10.77CPTEE226 pKa = 3.9TTITLTTCGPRR237 pKa = 11.84HH238 pKa = 5.82CHH240 pKa = 5.46PTTITVTEE248 pKa = 4.26PTTVTVSSCIPPAPTGPEE266 pKa = 3.75PTGPQPTGPQPTGPEE281 pKa = 4.14PTVSPPEE288 pKa = 3.98PTVTSWDD295 pKa = 3.65GAGTNPVPVLAAFLGFAALLAA316 pKa = 4.74

Molecular weight: 33.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2V1AZE8|A0A2V1AZE8_9ASCO Uncharacterized protein OS=[Candida] haemuloni OX=45357 GN=CXQ85_002923 PE=4 SV=1
MM1 pKa = 7.37FAGLKK6 pKa = 9.4HH7 pKa = 5.63CQRR10 pKa = 11.84TFRR13 pKa = 11.84VGINATRR20 pKa = 11.84QFSMLNKK27 pKa = 9.79PLVTSSLASPANQASRR43 pKa = 11.84ISPVAQSLPQTSVLSFLSNLVQKK66 pKa = 10.44RR67 pKa = 11.84FKK69 pKa = 11.08SRR71 pKa = 11.84GNTYY75 pKa = 10.24QPSTLKK81 pKa = 10.47RR82 pKa = 11.84KK83 pKa = 8.63RR84 pKa = 11.84TFGFLARR91 pKa = 11.84LRR93 pKa = 11.84TKK95 pKa = 10.52NGRR98 pKa = 11.84KK99 pKa = 8.57VLQRR103 pKa = 11.84RR104 pKa = 11.84RR105 pKa = 11.84AKK107 pKa = 9.93GRR109 pKa = 11.84WYY111 pKa = 9.11LTHH114 pKa = 7.23

Molecular weight: 13.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5240

0

5240

2783537

99

4948

531.2

59.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.775 ± 0.03

1.079 ± 0.012

6.037 ± 0.024

6.917 ± 0.039

4.409 ± 0.022

5.665 ± 0.035

2.227 ± 0.014

5.398 ± 0.024

6.813 ± 0.035

9.126 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.984 ± 0.012

4.778 ± 0.022

4.939 ± 0.035

3.969 ± 0.03

4.587 ± 0.023

9.167 ± 0.045

5.531 ± 0.059

6.284 ± 0.024

1.073 ± 0.011

3.242 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski