Propionibacterium phage PHL092M00

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pahexavirus; Propionibacterium virus PHL092M00

Average proteome isoelectric point is 6.38

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 45 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0E3DKZ3|A0A0E3DKZ3_9CAUD Uncharacterized protein OS=Propionibacterium phage PHL092M00 OX=1500813 GN=PHL092M00_27 PE=4 SV=1
MM1 pKa = 7.48NNTHH5 pKa = 7.12NIPSTALKK13 pKa = 9.41TVVHH17 pKa = 7.13RR18 pKa = 11.84IIQQQPTNMQQLEE31 pKa = 4.44NIVDD35 pKa = 3.96SVEE38 pKa = 3.74NQYY41 pKa = 10.59RR42 pKa = 11.84VPISLDD48 pKa = 3.34NVNLTVKK55 pKa = 10.14EE56 pKa = 4.09VSLDD60 pKa = 3.69DD61 pKa = 4.6LAIDD65 pKa = 4.03QDD67 pKa = 4.19TLDD70 pKa = 4.0EE71 pKa = 4.51CSEE74 pKa = 4.21ILWDD78 pKa = 4.43CDD80 pKa = 4.08SAGHH84 pKa = 6.03PTNNSNTRR92 pKa = 11.84GMPDD96 pKa = 3.29DD97 pKa = 3.91TQASQEE103 pKa = 4.31AIDD106 pKa = 3.89WLAGIAYY113 pKa = 8.03QAKK116 pKa = 9.97LLQAEE121 pKa = 5.02ADD123 pKa = 4.71DD124 pKa = 4.21IMQSIISHH132 pKa = 6.84RR133 pKa = 11.84DD134 pKa = 2.74NHH136 pKa = 6.49KK137 pKa = 10.87NVIGQDD143 pKa = 3.51VLHH146 pKa = 6.12QANDD150 pKa = 3.6IISACLYY157 pKa = 9.84LDD159 pKa = 3.84QMLEE163 pKa = 4.04DD164 pKa = 4.1TLDD167 pKa = 3.95DD168 pKa = 3.93NLL170 pKa = 4.84

Molecular weight: 19.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0E3DMQ3|A0A0E3DMQ3_9CAUD Tape measure protein OS=Propionibacterium phage PHL092M00 OX=1500813 GN=PHL092M00_14 PE=4 SV=1
MM1 pKa = 7.13AQDD4 pKa = 3.63VNVKK8 pKa = 10.51LNLPGIRR15 pKa = 11.84EE16 pKa = 4.17VLKK19 pKa = 11.04SSGVQSMLAEE29 pKa = 4.26RR30 pKa = 11.84GEE32 pKa = 4.3RR33 pKa = 11.84VRR35 pKa = 11.84RR36 pKa = 11.84AAAANVGGNAFDD48 pKa = 3.75RR49 pKa = 11.84AQYY52 pKa = 10.62RR53 pKa = 11.84SGLSSEE59 pKa = 4.53VQVHH63 pKa = 4.93RR64 pKa = 11.84VEE66 pKa = 3.97AVARR70 pKa = 11.84IGTTYY75 pKa = 10.82KK76 pKa = 9.95GGKK79 pKa = 9.29RR80 pKa = 11.84IEE82 pKa = 4.49AKK84 pKa = 10.34HH85 pKa = 5.05GTLARR90 pKa = 11.84SIGAASS96 pKa = 3.15

Molecular weight: 10.2 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

45

0

45

8610

43

921

191.3

20.92

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.965 ± 0.74

1.208 ± 0.181

6.655 ± 0.484

4.762 ± 0.427

2.776 ± 0.22

8.734 ± 0.667

2.706 ± 0.41

4.762 ± 0.364

4.019 ± 0.334

7.456 ± 0.283

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.648 ± 0.314

3.67 ± 0.288

5.029 ± 0.343

4.309 ± 0.377

6.26 ± 0.427

6.481 ± 0.325

6.074 ± 0.582

7.956 ± 0.84

1.94 ± 0.214

2.59 ± 0.299
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski