Bhendi yellow vein mosaic alphasatellite

Taxonomy: Viruses; Alphasatellitidae; Geminialphasatellitinae; unclassified Begomovirus-associated alphasatellites

Average proteome isoelectric point is 8.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0F6QR00|A0A0F6QR00_9VIRU Replication protein OS=Bhendi yellow vein mosaic alphasatellite OX=759124 PE=4 SV=1
MM1 pKa = 7.51PTIQSQWWCFTVFFLSATAPDD22 pKa = 4.4LVPLFEE28 pKa = 4.5NTHH31 pKa = 4.91VSYY34 pKa = 11.22ACWQEE39 pKa = 4.11EE40 pKa = 4.2EE41 pKa = 4.78SPTTRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84HH49 pKa = 4.54LQGYY53 pKa = 8.3LQLKK57 pKa = 8.77GKK59 pKa = 10.49RR60 pKa = 11.84SLAQVKK66 pKa = 10.33ALFGDD71 pKa = 4.58LNPHH75 pKa = 6.48LEE77 pKa = 4.05KK78 pKa = 10.69QRR80 pKa = 11.84ARR82 pKa = 11.84KK83 pKa = 7.55TDD85 pKa = 3.28EE86 pKa = 3.84ARR88 pKa = 11.84DD89 pKa = 3.66YY90 pKa = 11.56CMKK93 pKa = 10.74EE94 pKa = 3.85EE95 pKa = 4.25TRR97 pKa = 11.84VSGPFEE103 pKa = 4.18FGEE106 pKa = 4.19YY107 pKa = 8.47TAAGSHH113 pKa = 6.03KK114 pKa = 9.52RR115 pKa = 11.84RR116 pKa = 11.84QRR118 pKa = 11.84EE119 pKa = 3.99SVIRR123 pKa = 11.84SPVRR127 pKa = 11.84MAEE130 pKa = 4.07EE131 pKa = 4.09NPSVFRR137 pKa = 11.84RR138 pKa = 11.84VKK140 pKa = 10.82GKK142 pKa = 9.39DD143 pKa = 2.91CRR145 pKa = 11.84RR146 pKa = 11.84RR147 pKa = 11.84FPEE150 pKa = 4.23DD151 pKa = 3.17RR152 pKa = 11.84EE153 pKa = 4.2

Molecular weight: 18.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0F6QR00|A0A0F6QR00_9VIRU Replication protein OS=Bhendi yellow vein mosaic alphasatellite OX=759124 PE=4 SV=1
MM1 pKa = 7.51PTIQSQWWCFTVFFLSATAPDD22 pKa = 4.4LVPLFEE28 pKa = 4.5NTHH31 pKa = 4.91VSYY34 pKa = 11.22ACWQEE39 pKa = 4.11EE40 pKa = 4.2EE41 pKa = 4.78SPTTRR46 pKa = 11.84RR47 pKa = 11.84RR48 pKa = 11.84HH49 pKa = 4.54LQGYY53 pKa = 8.3LQLKK57 pKa = 8.77GKK59 pKa = 10.49RR60 pKa = 11.84SLAQVKK66 pKa = 10.33ALFGDD71 pKa = 4.58LNPHH75 pKa = 6.48LEE77 pKa = 4.05KK78 pKa = 10.69QRR80 pKa = 11.84ARR82 pKa = 11.84KK83 pKa = 7.55TDD85 pKa = 3.28EE86 pKa = 3.84ARR88 pKa = 11.84DD89 pKa = 3.66YY90 pKa = 11.56CMKK93 pKa = 10.74EE94 pKa = 3.85EE95 pKa = 4.25TRR97 pKa = 11.84VSGPFEE103 pKa = 4.18FGEE106 pKa = 4.19YY107 pKa = 8.47TAAGSHH113 pKa = 6.03KK114 pKa = 9.52RR115 pKa = 11.84RR116 pKa = 11.84QRR118 pKa = 11.84EE119 pKa = 3.99SVIRR123 pKa = 11.84SPVRR127 pKa = 11.84MAEE130 pKa = 4.07EE131 pKa = 4.09NPSVFRR137 pKa = 11.84RR138 pKa = 11.84VKK140 pKa = 10.82GKK142 pKa = 9.39DD143 pKa = 2.91CRR145 pKa = 11.84RR146 pKa = 11.84RR147 pKa = 11.84FPEE150 pKa = 4.23DD151 pKa = 3.17RR152 pKa = 11.84EE153 pKa = 4.2

Molecular weight: 18.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

153

153

153

153.0

18.04

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.536 ± 0.0

2.614 ± 0.0

3.922 ± 0.0

9.804 ± 0.0

5.882 ± 0.0

4.575 ± 0.0

2.614 ± 0.0

1.307 ± 0.0

5.882 ± 0.0

6.536 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.961 ± 0.0

1.961 ± 0.0

5.882 ± 0.0

5.229 ± 0.0

12.418 ± 0.0

6.536 ± 0.0

5.882 ± 0.0

5.882 ± 0.0

1.961 ± 0.0

2.614 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski